RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	RAD9	P14737	1309 aa		3.41	□□□□□ -1.86
SNL1	YIL016W	RPS19A	P07280	144 aa	Known RBP	3.4	□□□□□ -1.87
SNL1	YIL016W	RPS19B	P07281	144 aa	Predicted RBP	3.4	□□□□□ -1.87
SNL1	YIL016W	COS2	P0CX12	379 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	COS3	P0CX13	379 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	YPK2	P18961	677 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	PPH21	P23594	369 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.87	not detected
SNL1	YIL016W	DRE2	P36152	348 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	YMR144W	P40214	342 aa	Known RBP	3.4	□□□□□ -1.87
SNL1	YIL016W	COS4	P43542	379 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	ADO1	P47143	340 aa	Known RBP	3.4	□□□□□ -1.87
SNL1	YIL016W	COQ5	P49017	307 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	MIC26	P50087	233 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	SNZ1	Q03148	297 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	YMR114C	Q04471	368 aa	Known RBP	3.4	□□□□□ -1.87
SNL1	YIL016W	MRX8	Q05473	314 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	SEI1	Q06058	285 aa		3.4	□□□□□ -1.87
SNL1	YIL016W	RRP40	Q08285	240 aa	Known RBP	3.4	□□□□□ -1.87
SNL1	YIL016W	HTB1	P02293	131 aa	Known RBP	3.39	□□□□□ -1.87
SNL1	YIL016W	HTB2	P02294	131 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	CPT1	P17898	393 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	PRE7	P23724	241 aa	Known RBP	3.39	□□□□□ -1.87
SNL1	YIL016W	TAF14	P35189	244 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	YRB2	P40517	327 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	YFL012W	P43580	148 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	UFD1	P53044	361 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	NIF3	P53081	288 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	NSA1	P53136	463 aa	Predicted RBP	3.39	□□□□□ -1.87
SNL1	YIL016W	YGL034C	P53186	121 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	OSH6	Q02201	448 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	JLP1	Q12358	412 aa		3.39	□□□□□ -1.87
SNL1	YIL016W	RPL27A	P0C2H6	136 aa	Known RBP	3.38	□□□□□ -1.87
SNL1	YIL016W	RPL27B	P0C2H7	136 aa	Known RBP	3.38	□□□□□ -1.87
SNL1	YIL016W	SNA3	P14359	133 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	YHI9	P38765	294 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	SEO1	P39709	593 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	NUP57	P48837	541 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	MGA1	P53050	456 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	FYV6	P53913	173 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	GOT1	Q03554	138 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	CDD1	Q06549	142 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	YOR186W	Q08560	144 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	YPR011C	Q12251	326 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	DCN1	Q12395	269 aa		3.38	□□□□□ -1.87
SNL1	YIL016W	BCY1	P07278	416 aa	Known RBP	3.37	□□□□□ -1.87
SNL1	YIL016W	YHB1	P39676	399 aa	Known RBP	3.37	□□□□□ -1.87
SNL1	YIL016W	MRH4	P53166	561 aa		3.37	□□□□□ -1.87
SNL1	YIL016W	YGR067C	P53243	804 aa		3.37	□□□□□ -1.87
SNL1	YIL016W	PIN3	Q06449	215 aa		3.37	□□□□□ -1.87
SNL1	YIL016W	YOL019W	Q08157	551 aa		3.37	□□□□□ -1.87
SNL1	YIL016W	YBL112C	Q3E7Y4	105 aa		3.37	□□□□□ -1.87
SNL1	YIL016W	RFA3	P26755	122 aa	Known RBP	3.36	□□□□□ -1.87
SNL1	YIL016W	YOX1	P34161	385 aa		3.36	□□□□□ -1.87
SNL1	YIL016W	CAB3	P36076	571 aa		3.36	□□□□□ -1.87
SNL1	YIL016W	SSH1	P38353	490 aa	Known RBP	3.36	□□□□□ -1.87
SNL1	YIL016W	YER034W	P40022	185 aa	Known RBP	3.36	□□□□□ -1.87
SNL1	YIL016W	YJL028W	P47062	111 aa		3.36	□□□□□ -1.87
SNL1	YIL016W	YJR149W	P47177	404 aa		3.36	□□□□□ -1.87
SNL1	YIL016W	YNL046W	P53956	172 aa		3.36	□□□□□ -1.87
SNL1	YIL016W	SMD1	Q02260	146 aa	Predicted RBP	3.36	□□□□□ -1.87
SNL1	YIL016W	TVP15	Q03860	143 aa		3.36	□□□□□ -1.87
SNL1	YIL016W	YDR124W	Q04608	324 aa		3.36	□□□□□ -1.87
SNL1	YIL016W	YLR179C	Q06252	201 aa	Known RBP	3.36	□□□□□ -1.87
SNL1	YIL016W	IES3	Q12345	250 aa		3.36	□□□□□ -1.87
SNL1	YIL016W	SWI1	P09547	1314 aa		3.36	□□□□□ -1.87
SNL1	YIL016W	COX5A	P00424	153 aa		3.35	□□□□□ -1.87
SNL1	YIL016W	URA6	P15700	204 aa		3.35	□□□□□ -1.87
SNL1	YIL016W	DPB2	P24482	689 aa	Predicted RBP	3.35	□□□□□ -1.87
SNL1	YIL016W	PRX1	P34227	261 aa	Known RBP	3.35	□□□□□ -1.87
SNL1	YIL016W	YHL044W	P38727	235 aa		3.35	□□□□□ -1.87
SNL1	YIL016W	IKI1	P38874	309 aa		3.35	□□□□□ -1.87
SNL1	YIL016W	NOP19	P53317	196 aa	Predicted RBP	3.35	□□□□□ -1.87
SNL1	YIL016W	YDR222W	Q04925	415 aa		3.35	□□□□□ -1.87
SNL1	YIL016W	SLD7	Q08457	257 aa		3.35	□□□□□ -1.87
SNL1	YIL016W	MSA1	Q08471	629 aa		3.35	□□□□□ -1.87
SNL1	YIL016W	SYC1	Q08553	188 aa	Predicted RBP	3.35	□□□□□ -1.87
SNL1	YIL016W	CLP1	Q08685	445 aa	Predicted RBP	3.35	□□□□□ -1.87
SNL1	YIL016W	YPL264C	Q08980	353 aa		3.35	□□□□□ -1.87
SNL1	YIL016W	YCL012C	Q8J0M4	134 aa		3.35	□□□□□ -1.87
SNL1	YIL016W	SPT3	P06844	337 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	YAK1	P14680	807 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	CKA2	P19454	339 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	MRPS9	P38120	278 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	SPL2	P38839	148 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	SUR2	P38992	349 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	MCM22	P47167	239 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	TOS8	P53147	276 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	EMI1	Q04406	187 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	TPO4	Q12256	659 aa		3.34	□□□□□ -1.87
SNL1	YIL016W	PAN1	P32521	1480 aa		3.34	□□□□□ -1.88
SNL1	YIL016W	YEL009C-A	A0A023PZF2	135 aa		3.33	□□□□□ -1.88
SNL1	YIL016W	CUP2	P15315	225 aa		3.33	□□□□□ -1.88
SNL1	YIL016W	DBF2	P22204	572 aa		3.33	□□□□□ -1.88
SNL1	YIL016W	RAD51	P25454	400 aa		3.33	□□□□□ -1.88
SNL1	YIL016W	TRM7	P38238	310 aa	Known RBP	3.33	□□□□□ -1.88
SNL1	YIL016W	GET1	P53192	235 aa		3.33	□□□□□ -1.88
SNL1	YIL016W	ABP140	Q08641	628 aa	Known RBP	3.33	□□□□□ -1.88
SNL1	YIL016W	PST1	Q12355	444 aa		3.33	□□□□□ -1.88
SNL1	YIL016W	YPL229W	Q99395	206 aa		3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms