RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	SPS18	P32572	300 aa		4.55	□□□□□ -1.68
SNF11	YDR073W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SNF11	YDR073W	POG1	P40473	351 aa		4.55	□□□□□ -1.68
SNF11	YDR073W	CPR7	P47103	393 aa		4.55	□□□□□ -1.68
SNF11	YDR073W	GOT1	Q03554	138 aa		4.55	□□□□□ -1.68
SNF11	YDR073W	TRM10	Q12400	293 aa		4.55	□□□□□ -1.68
SNF11	YDR073W	PHO80	P20052	293 aa		4.54	□□□□□ -1.68
SNF11	YDR073W	CAF4	P36130	643 aa		4.54	□□□□□ -1.68
SNF11	YDR073W	YJR141W	P47172	347 aa	Predicted RBP	4.54	□□□□□ -1.68
SNF11	YDR073W	OST3	P48439	350 aa		4.54	□□□□□ -1.68
SNF11	YDR073W	SSU72	P53538	206 aa	Predicted RBP	4.54	□□□□□ -1.68
SNF11	YDR073W	AAH1	P53909	347 aa		4.54	□□□□□ -1.68
SNF11	YDR073W	YPL150W	Q12152	901 aa		4.54	□□□□□ -1.68
SNF11	YDR073W	YDR018C	Q12185	396 aa		4.54	□□□□□ -1.68
SNF11	YDR073W	MRX4	Q12467	430 aa		4.54	□□□□□ -1.68
SNF11	YDR073W	PSK1	P31374	1356 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	DBF2	P22204	572 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	TIP20	P33891	701 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	FMP46	P36141	133 aa	Known RBP	4.53	□□□□□ -1.68
SNF11	YDR073W	SRP14	P38985	146 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	KRE9	P39005	276 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	MTW1	P39731	289 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	MRH4	P53166	561 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	YIP3	P53633	176 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	PDR17	P53844	350 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	YML122C	Q03207	126 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	VHS1	Q03785	461 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	YMR244W	Q04018	355 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	YDR124W	Q04608	324 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	SYC1	Q08553	188 aa	Predicted RBP	4.53	□□□□□ -1.68
SNF11	YDR073W	HRT3	Q12347	344 aa		4.53	□□□□□ -1.68
SNF11	YDR073W	ERG2	P32352	222 aa		4.52	□□□□□ -1.69
SNF11	YDR073W	HMT1	P38074	348 aa		4.52	□□□□□ -1.69
SNF11	YDR073W	SHG1	P38337	142 aa		4.52	□□□□□ -1.69
SNF11	YDR073W	YHI9	P38765	294 aa		4.52	□□□□□ -1.69
SNF11	YDR073W	AVT6	P40074	448 aa		4.52	□□□□□ -1.69
SNF11	YDR073W	GAB1	P41733	394 aa		4.52	□□□□□ -1.69
SNF11	YDR073W	BXI1	P48558	297 aa		4.52	□□□□□ -1.69
SNF11	YDR073W	CDC28	P00546	298 aa	Known RBP	4.51	□□□□□ -1.69
SNF11	YDR073W	EPT1	P22140	391 aa		4.51	□□□□□ -1.69
SNF11	YDR073W	ZRT3	P34240	503 aa		4.51	□□□□□ -1.69
SNF11	YDR073W	EDC2	P40023	145 aa	Predicted RBP	4.51	□□□□□ -1.69
SNF11	YDR073W	YGL260W	P53056	76 aa		4.51	□□□□□ -1.69
SNF11	YDR073W	TOS8	P53147	276 aa		4.51	□□□□□ -1.69
SNF11	YDR073W	GTR2	P53290	341 aa		4.51	□□□□□ -1.69
SNF11	YDR073W	INM2	Q05533	292 aa		4.51	□□□□□ -1.69
SNF11	YDR073W	YAL063C-A	Q3E791	96 aa		4.51	□□□□□ -1.69
SNF11	YDR073W	YBL008W-A	Q3E821	79 aa		4.51	□□□□□ -1.69
SNF11	YDR073W	ZWF1	P11412	505 aa	Known RBP	4.5	□□□□□ -1.69
SNF11	YDR073W	GPI18	P38211	433 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	SSH1	P38353	490 aa	Known RBP	4.5	□□□□□ -1.69
SNF11	YDR073W	RRG9	P40156	214 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	YIL054W	P40524	105 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	MIC19	P43594	170 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	RPE1	P46969	238 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	YJR056C	P47115	236 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	YGL118C	P53132	145 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	YGR018C	P53211	109 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	YGR067C	P53243	804 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	BOR1	P53838	576 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	SWT21	P53873	357 aa	Predicted RBP	4.5	□□□□□ -1.69
SNF11	YDR073W	PAL1	Q05518	499 aa	Known RBP	4.5	□□□□□ -1.69
SNF11	YDR073W	YOL029C	Q08187	201 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	YNG1	Q08465	219 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	YOR186W	Q08560	144 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	RAX2	Q12465	1220 aa		4.5	□□□□□ -1.69
SNF11	YDR073W	GCN3	P14741	305 aa		4.49	□□□□□ -1.69
SNF11	YDR073W	TRR1	P29509	319 aa	Known RBP	4.49	□□□□□ -1.69
SNF11	YDR073W	SRY1	P36007	326 aa		4.49	□□□□□ -1.69
SNF11	YDR073W	PRY2	P36110	329 aa		4.49	□□□□□ -1.69
SNF11	YDR073W	YNL046W	P53956	172 aa		4.49	□□□□□ -1.69
SNF11	YDR073W	QCR2	P07257	368 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	PUT1	P09368	476 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	YOL163W	P0CF20	169 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	ERD2	P18414	219 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	FES1	P38260	290 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	COG3	P40094	801 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	YGL262W	P53054	175 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	SNO1	Q03144	224 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	YMR279C	Q03263	540 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	YDR248C	Q03786	193 aa		4.48	□□□□□ -1.69
SNF11	YDR073W	RRG7	Q08774	242 aa	Predicted RBP	4.48	□□□□□ -1.69
SNF11	YDR073W	MET2	P08465	486 aa		4.47	□□□□□ -1.69
SNF11	YDR073W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
SNF11	YDR073W	OAC1	P32332	324 aa		4.47	□□□□□ -1.69
SNF11	YDR073W	UBC6	P33296	250 aa	Predicted RBP	4.47	□□□□□ -1.69
SNF11	YDR073W	MRPL28	P36527	147 aa		4.47	□□□□□ -1.69
SNF11	YDR073W	ARN2	P38724	620 aa		4.47	□□□□□ -1.69
SNF11	YDR073W	ILM1	P47155	203 aa		4.47	□□□□□ -1.69
SNF11	YDR073W	SYF2	P53277	215 aa	Predicted RBP	4.47	□□□□□ -1.69
SNF11	YDR073W	NNT1	Q05874	261 aa		4.47	□□□□□ -1.69
SNF11	YDR073W	WTM1	Q12363	437 aa	Known RBP	4.47	□□□□□ -1.69
SNF11	YDR073W	YMR230W-A	Q3E7B5	62 aa		4.47	□□□□□ -1.69
SNF11	YDR073W	COX4	P04037	155 aa		4.46	□□□□□ -1.7
SNF11	YDR073W	CSG2	P35206	410 aa		4.46	□□□□□ -1.7
SNF11	YDR073W	RRT13	P40042	185 aa		4.46	□□□□□ -1.7
SNF11	YDR073W	PEX17	P40155	199 aa		4.46	□□□□□ -1.7
SNF11	YDR073W	TIR4	Q12218	487 aa	Predicted RBP	4.46	□□□□□ -1.7
SNF11	YDR073W	DFM1	Q12743	341 aa	Known RBP	4.46	□□□□□ -1.7
SNF11	YDR073W	CKA2	P19454	339 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 188.1 ms