RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C IKS1P47042 667 aa4.44□□□□□ -1.7
SCM3YDL139C UBX6P47049 396 aa4.44□□□□□ -1.7
SCM3YDL139C MSY1P48527 492 aa4.44□□□□□ -1.7
SCM3YDL139C PMT5P52867 743 aa4.44□□□□□ -1.7
SCM3YDL139C COS10P52924 374 aa4.44□□□□□ -1.7
SCM3YDL139C ARO8P53090 500 aaKnown RBP4.44□□□□□ -1.7
SCM3YDL139C OKP1P53298 406 aa4.44□□□□□ -1.7
SCM3YDL139C RHO5P53879 331 aaKnown RBP4.44□□□□□ -1.7
SCM3YDL139C YLR460CP54007 376 aa4.44□□□□□ -1.7
SCM3YDL139C CIK1Q01649 594 aa4.44□□□□□ -1.7
SCM3YDL139C PEX25Q02969 394 aa4.44□□□□□ -1.7
SCM3YDL139C RCF1Q03713 159 aa4.44□□□□□ -1.7
SCM3YDL139C ATG38Q05789 226 aaKnown RBP4.44□□□□□ -1.7
SCM3YDL139C KEI1Q06346 221 aa4.44□□□□□ -1.7
SCM3YDL139C FEX2Q08991 375 aa4.44□□□□□ -1.7
SCM3YDL139C MDM32Q12171 622 aa4.44□□□□□ -1.7
SCM3YDL139C NCE102Q12207 173 aaRIP-Chip data4.44□□□□□ -1.7not detected
SCM3YDL139C YPR1Q12458 312 aa4.44□□□□□ -1.7
SCM3YDL139C TEL1P38110 2787 aa4.43□□□□□ -1.7
SCM3YDL139C RAD52P06778 471 aaKnown RBP4.43□□□□□ -1.7
SCM3YDL139C MRP1P10662 321 aaKnown RBP4.43□□□□□ -1.7
SCM3YDL139C PET54P10834 293 aa4.43□□□□□ -1.7
SCM3YDL139C NAM9P27929 486 aa4.43□□□□□ -1.7
SCM3YDL139C ARO4P32449 370 aaKnown RBP4.43□□□□□ -1.7
SCM3YDL139C PAU2P32612 120 aa4.43□□□□□ -1.7
SCM3YDL139C SRY1P36007 326 aa4.43□□□□□ -1.7
SCM3YDL139C PHO90P39535 881 aa4.43□□□□□ -1.7
SCM3YDL139C RTT105P40063 208 aa4.43□□□□□ -1.7
SCM3YDL139C DPB11P47027 764 aaPredicted RBP4.43□□□□□ -1.7
SCM3YDL139C TAX4P47030 604 aa4.43□□□□□ -1.7
SCM3YDL139C MDE1P47095 244 aa4.43□□□□□ -1.7
SCM3YDL139C TPN1P53099 579 aa4.43□□□□□ -1.7
SCM3YDL139C LSM7P53905 115 aaKnown RBP4.43□□□□□ -1.7
SCM3YDL139C SCS7Q03529 384 aa4.43□□□□□ -1.7
SCM3YDL139C GRX3Q03835 250 aa4.43□□□□□ -1.7
SCM3YDL139C BNA7Q04066 261 aa4.43□□□□□ -1.7
SCM3YDL139C YMR315WQ04869 349 aaKnown RBP4.43□□□□□ -1.7
SCM3YDL139C YPR147CQ06522 304 aaKnown RBP4.43□□□□□ -1.7
SCM3YDL139C RDL2Q08742 149 aaKnown RBP4.43□□□□□ -1.7
SCM3YDL139C FEX1Q08913 375 aa4.43□□□□□ -1.7
SCM3YDL139C YOR214CQ12282 236 aa4.43□□□□□ -1.7
SCM3YDL139C SEN1Q00416 2231 aaKnown RBP4.42□□□□□ -1.7
SCM3YDL139C GCN4P03069 281 aa4.42□□□□□ -1.7
SCM3YDL139C CAP2P13517 287 aa4.42□□□□□ -1.7
SCM3YDL139C MDM10P18409 493 aa4.42□□□□□ -1.7
SCM3YDL139C DBF2P22204 572 aa4.42□□□□□ -1.7
SCM3YDL139C ASF2P32448 525 aaPredicted RBP4.42□□□□□ -1.7
SCM3YDL139C HYM1P32464 399 aa4.42□□□□□ -1.7
SCM3YDL139C DOA4P32571 926 aa4.42□□□□□ -1.7
SCM3YDL139C TRS65P32893 560 aa4.42□□□□□ -1.7
SCM3YDL139C TAF14P35189 244 aa4.42□□□□□ -1.7
SCM3YDL139C FMP23P38231 175 aa4.42□□□□□ -1.7
SCM3YDL139C TIR3P40552 269 aa4.42□□□□□ -1.7
SCM3YDL139C APS3P47064 194 aa4.42□□□□□ -1.7
SCM3YDL139C MNT4P53745 580 aa4.42□□□□□ -1.7
SCM3YDL139C MIX14Q04341 121 aa4.42□□□□□ -1.7
SCM3YDL139C CTS2Q06350 511 aa4.42□□□□□ -1.7
SCM3YDL139C RAX1Q08760 435 aa4.42□□□□□ -1.7
SCM3YDL139C BAG7Q12128 409 aa4.42□□□□□ -1.7
SCM3YDL139C ORT1Q12375 292 aa4.42□□□□□ -1.7
SCM3YDL139C ERG27Q12452 347 aaKnown RBP4.42□□□□□ -1.7
SCM3YDL139C YGL194C-AQ2V2P6 80 aa4.42□□□□□ -1.7
SCM3YDL139C YHR214C-EQ8TGK0 99 aa4.42□□□□□ -1.7
SCM3YDL139C COX5BP00425 151 aa4.41□□□□□ -1.7
SCM3YDL139C RPL40AP0CH08 128 aaKnown RBP4.41□□□□□ -1.7
SCM3YDL139C RPL40BP0CH09 128 aaKnown RBP4.41□□□□□ -1.7
SCM3YDL139C DSF1P0CX08 502 aa4.41□□□□□ -1.7
SCM3YDL139C YNR073CP0CX09 502 aa4.41□□□□□ -1.7
SCM3YDL139C STF2P16965 84 aa4.41□□□□□ -1.7
SCM3YDL139C CKS1P20486 150 aaKnown RBP4.41□□□□□ -1.7
SCM3YDL139C NUP1P20676 1076 aa4.41□□□□□ -1.7
SCM3YDL139C CPR3P25719 182 aa4.41□□□□□ -1.7
SCM3YDL139C MSN4P33749 630 aa4.41□□□□□ -1.7
SCM3YDL139C PKP1P40530 394 aa4.41□□□□□ -1.7
SCM3YDL139C ADO1P47143 340 aaKnown RBP4.41□□□□□ -1.7
SCM3YDL139C VHT1P53241 593 aa4.41□□□□□ -1.7
SCM3YDL139C RPL6AQ02326 176 aaKnown RBP4.41□□□□□ -1.7
SCM3YDL139C YDR209CQ03480 137 aa4.41□□□□□ -1.7
SCM3YDL139C MDM30Q05930 598 aa4.41□□□□□ -1.7
SCM3YDL139C AKR2Q12013 749 aa4.41□□□□□ -1.7
SCM3YDL139C YOS9Q99220 542 aa4.41□□□□□ -1.7
SCM3YDL139C YAL064W-BO13512 126 aa4.4□□□□□ -1.71
SCM3YDL139C COX9P07255 59 aa4.4□□□□□ -1.71
SCM3YDL139C SPS2P08459 502 aa4.4□□□□□ -1.71
SCM3YDL139C YLL053CP0CD98 152 aa4.4□□□□□ -1.71
SCM3YDL139C GCN3P14741 305 aa4.4□□□□□ -1.71
SCM3YDL139C VPS17P32913 551 aa4.4□□□□□ -1.71
SCM3YDL139C MRPS5P33759 307 aa4.4□□□□□ -1.71
SCM3YDL139C HOT13P36078 116 aa4.4□□□□□ -1.71
SCM3YDL139C SHO1P40073 367 aa4.4□□□□□ -1.71
SCM3YDL139C YER137CP40083 148 aaKnown RBP4.4□□□□□ -1.71
SCM3YDL139C BUR6P40096 142 aa4.4□□□□□ -1.71
SCM3YDL139C ECO1P43605 281 aa4.4□□□□□ -1.71
SCM3YDL139C BSC5P53755 489 aa4.4□□□□□ -1.71
SCM3YDL139C CGI121Q03705 181 aaKnown RBP4.4□□□□□ -1.71
SCM3YDL139C AIM36Q03798 255 aa4.4□□□□□ -1.71
SCM3YDL139C COQ11Q05892 277 aa4.4□□□□□ -1.71
SCM3YDL139C GPN3Q06543 272 aa4.4□□□□□ -1.71
SCM3YDL139C MIM1Q08176 113 aa4.4□□□□□ -1.71
SCM3YDL139C MCH4Q08268 501 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms