RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W ECI1Q05871 280 aa1.77□□□□□ -2.13
UBP1YDL122W RAD7P06779 565 aa1.76□□□□□ -2.13
UBP1YDL122W MRPL25P23369 157 aa1.76□□□□□ -2.13
UBP1YDL122W IES6P32617 166 aa1.76□□□□□ -2.13
UBP1YDL122W PRS1P32895 427 aaKnown RBP1.76□□□□□ -2.13
UBP1YDL122W CLB6P32943 380 aa1.76□□□□□ -2.13
UBP1YDL122W CBF5P33322 483 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
UBP1YDL122W PPZ2P33329 710 aa1.76□□□□□ -2.13
UBP1YDL122W ECM15P35195 104 aa1.76□□□□□ -2.13
UBP1YDL122W VPS21P36017 210 aaKnown RBP1.76□□□□□ -2.13
UBP1YDL122W SPC34P36131 295 aa1.76□□□□□ -2.13
UBP1YDL122W NSG1P38837 291 aa1.76□□□□□ -2.13
UBP1YDL122W FMP33P46998 180 aa1.76□□□□□ -2.13
UBP1YDL122W TOS2P50078 622 aa1.76□□□□□ -2.13
UBP1YDL122W RSM27P53305 110 aa1.76□□□□□ -2.13
UBP1YDL122W YNR048WP53740 393 aa1.76□□□□□ -2.13
UBP1YDL122W YNR064CP53750 290 aa1.76□□□□□ -2.13
UBP1YDL122W SPR6Q01684 191 aa1.76□□□□□ -2.13
UBP1YDL122W SRL4Q03085 281 aa1.76□□□□□ -2.13
UBP1YDL122W ORM2Q06144 216 aa1.76□□□□□ -2.13
UBP1YDL122W VPS74Q06385 345 aa1.76□□□□□ -2.13
UBP1YDL122W RDL2Q08742 149 aaKnown RBP1.76□□□□□ -2.13
UBP1YDL122W FDH1Q08911 376 aa1.76□□□□□ -2.13
UBP1YDL122W YDL109CQ12103 647 aa1.76□□□□□ -2.13
UBP1YDL122W NCA2Q12374 616 aa1.76□□□□□ -2.13
UBP1YDL122W YOP1Q12402 180 aa1.76□□□□□ -2.13
UBP1YDL122W YCL048W-AQ2V2Q2 79 aa1.76□□□□□ -2.13
UBP1YDL122W ARO4P32449 370 aaKnown RBP1.76□□□□□ -2.13
UBP1YDL122W PTR2P32901 601 aa1.76□□□□□ -2.13
UBP1YDL122W VAM7P32912 316 aa1.76□□□□□ -2.13
UBP1YDL122W YKL162CP36052 402 aa1.76□□□□□ -2.13
UBP1YDL122W SCO2P38072 301 aa1.76□□□□□ -2.13
UBP1YDL122W YER085CP40058 173 aa1.76□□□□□ -2.13
UBP1YDL122W GAT4P40569 121 aa1.76□□□□□ -2.13
UBP1YDL122W MSS2P40990 351 aa1.76□□□□□ -2.13
UBP1YDL122W AZF1P41696 914 aa1.76□□□□□ -2.13
UBP1YDL122W MRX5P47007 382 aa1.76□□□□□ -2.13
UBP1YDL122W YJL118WP47022 219 aa1.76□□□□□ -2.13
UBP1YDL122W COX16P47081 118 aa1.76□□□□□ -2.13
UBP1YDL122W CCC1P47818 322 aa1.76□□□□□ -2.13
UBP1YDL122W SSN8P47821 323 aa1.76□□□□□ -2.13
UBP1YDL122W NAS6P50086 228 aa1.76□□□□□ -2.13
UBP1YDL122W AVT4P50944 713 aa1.76□□□□□ -2.13
UBP1YDL122W UFD1P53044 361 aa1.76□□□□□ -2.13
UBP1YDL122W GEP7P53171 287 aa1.76□□□□□ -2.13
UBP1YDL122W TIM21P53220 239 aa1.76□□□□□ -2.13
UBP1YDL122W SHY1P53266 389 aa1.76□□□□□ -2.13
UBP1YDL122W IDP3P53982 420 aaKnown RBP1.76□□□□□ -2.13
UBP1YDL122W ODC1Q03028 310 aa1.76□□□□□ -2.13
UBP1YDL122W IZH1Q03419 316 aa1.76□□□□□ -2.13
UBP1YDL122W COX20Q04935 205 aa1.76□□□□□ -2.13
UBP1YDL122W CTS2Q06350 511 aa1.76□□□□□ -2.13
UBP1YDL122W NIP7Q08962 181 aaKnown RBP1.76□□□□□ -2.13
UBP1YDL122W SLF1Q12034 447 aaKnown RBP1.76□□□□□ -2.13
UBP1YDL122W YDL009CQ12210 107 aa1.76□□□□□ -2.13
UBP1YDL122W SIA1Q12212 622 aa1.76□□□□□ -2.13
UBP1YDL122W UBA3Q99344 299 aa1.76□□□□□ -2.13
UBP1YDL122W SCO1P23833 295 aa1.75□□□□□ -2.13
UBP1YDL122W ROX3P25046 220 aa1.75□□□□□ -2.13
UBP1YDL122W YCR016WP25617 290 aaKnown RBP1.75□□□□□ -2.13
UBP1YDL122W TIP1P27654 210 aaPredicted RBP1.75□□□□□ -2.13
UBP1YDL122W ZUO1P32527 433 aaKnown RBP1.75□□□□□ -2.13
UBP1YDL122W TOA2P32774 122 aa1.75□□□□□ -2.13
UBP1YDL122W LOS1P33418 1100 aaPredicted RBP1.75□□□□□ -2.13
UBP1YDL122W YKL071WP36086 256 aa1.75□□□□□ -2.13
UBP1YDL122W FMP23P38231 175 aa1.75□□□□□ -2.13
UBP1YDL122W COG3P40094 801 aa1.75□□□□□ -2.13
UBP1YDL122W UBC13P52490 153 aa1.75□□□□□ -2.13
UBP1YDL122W SWP1Q02795 286 aa1.75□□□□□ -2.13
UBP1YDL122W YMR279CQ03263 540 aa1.75□□□□□ -2.13
UBP1YDL122W RIM13Q03792 727 aa1.75□□□□□ -2.13
UBP1YDL122W IRC25Q07951 179 aa1.75□□□□□ -2.13
UBP1YDL122W TIM18Q08749 192 aa1.75□□□□□ -2.13
UBP1YDL122W BSC1Q12140 328 aa1.75□□□□□ -2.13
UBP1YDL122W USB1Q12208 290 aaKnown RBP1.75□□□□□ -2.13
UBP1YDL122W TPT1Q12272 230 aaKnown RBP1.75□□□□□ -2.13
UBP1YDL122W RAD1P06777 1100 aa1.75□□□□□ -2.13
UBP1YDL122W ARG80P07249 177 aa1.75□□□□□ -2.13
UBP1YDL122W KSS1P14681 368 aa1.75□□□□□ -2.13
UBP1YDL122W PET9P18239 318 aaKnown RBP1.75□□□□□ -2.13
UBP1YDL122W ACB1P31787 87 aa1.75□□□□□ -2.13
UBP1YDL122W SRB4P32569 687 aa1.75□□□□□ -2.13
UBP1YDL122W GPX1P36014 167 aa1.75□□□□□ -2.13
UBP1YDL122W YKR015CP36111 568 aa1.75□□□□□ -2.13
UBP1YDL122W YBR241CP38142 488 aa1.75□□□□□ -2.13
UBP1YDL122W YBR096WP38256 230 aa1.75□□□□□ -2.13
UBP1YDL122W HIS2P38635 335 aa1.75□□□□□ -2.13
UBP1YDL122W SBE22P38814 852 aa1.75□□□□□ -2.13
UBP1YDL122W GWT1P47026 490 aa1.75□□□□□ -2.13
UBP1YDL122W CLD1P53264 445 aa1.75□□□□□ -2.13
UBP1YDL122W RRN9P53437 365 aa1.75□□□□□ -2.13
UBP1YDL122W REX2P54964 269 aaKnown RBP1.75□□□□□ -2.13
UBP1YDL122W RSC9Q03124 581 aa1.75□□□□□ -2.13
UBP1YDL122W GTO3Q04806 366 aa1.75□□□□□ -2.13
UBP1YDL122W GMC2Q06201 188 aa1.75□□□□□ -2.13
UBP1YDL122W GAT3Q07928 141 aa1.75□□□□□ -2.13
UBP1YDL122W TDH3P00359 332 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
UBP1YDL122W RVS161P25343 265 aaKnown RBP1.74□□□□□ -2.13
UBP1YDL122W TRX3P25372 127 aa1.74□□□□□ -2.13
UBP1YDL122W MGT1P26188 188 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms