RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C SNZ2P53824 298 aa2.63□□□□□ -1.99
RRP42YDL111C SMD1Q02260 146 aaPredicted RBP2.63□□□□□ -1.99
RRP42YDL111C TVP15Q03860 143 aa2.63□□□□□ -1.99
RRP42YDL111C YMR114CQ04471 368 aaKnown RBP2.63□□□□□ -1.99
RRP42YDL111C YDR124WQ04608 324 aa2.63□□□□□ -1.99
RRP42YDL111C MRX8Q05473 314 aa2.63□□□□□ -1.99
RRP42YDL111C CDC123Q05791 360 aa2.63□□□□□ -1.99
RRP42YDL111C SEI1Q06058 285 aa2.63□□□□□ -1.99
RRP42YDL111C SYC1Q08553 188 aaPredicted RBP2.63□□□□□ -1.99
RRP42YDL111C ATG5Q12380 294 aa2.63□□□□□ -1.99
RRP42YDL111C DCN1Q12395 269 aa2.63□□□□□ -1.99
RRP42YDL111C FLO11P08640 1367 aa2.62□□□□□ -1.99
RRP42YDL111C YPK2P18961 677 aa2.62□□□□□ -1.99
RRP42YDL111C CWC23P52868 283 aaPredicted RBP2.62□□□□□ -1.99
RRP42YDL111C RSM27P53305 110 aa2.62□□□□□ -1.99
RRP42YDL111C GOT1Q03554 138 aa2.62□□□□□ -1.99
RRP42YDL111C YLR126CQ12288 251 aa2.62□□□□□ -1.99
RRP42YDL111C SMT3Q12306 101 aaKnown RBP2.62□□□□□ -1.99
RRP42YDL111C SNA3P14359 133 aa2.61□□□□□ -1.99
RRP42YDL111C CUP2P15315 225 aa2.61□□□□□ -1.99
RRP42YDL111C CPT1P17898 393 aa2.61□□□□□ -1.99
RRP42YDL111C BMH1P29311 267 aaKnown RBP2.61□□□□□ -1.99
RRP42YDL111C PRX1P34227 261 aaKnown RBP2.61□□□□□ -1.99
RRP42YDL111C MID2P36027 376 aa2.61□□□□□ -1.99
RRP42YDL111C CAB3P36076 571 aa2.61□□□□□ -1.99
RRP42YDL111C ARN2P38724 620 aa2.61□□□□□ -1.99
RRP42YDL111C YNL194CP40169 301 aa2.61□□□□□ -1.99
RRP42YDL111C YMR144WP40214 342 aaKnown RBP2.61□□□□□ -1.99
RRP42YDL111C YRB2P40517 327 aa2.61□□□□□ -1.99
RRP42YDL111C YJR149WP47177 404 aa2.61□□□□□ -1.99
RRP42YDL111C OSH6Q02201 448 aa2.61□□□□□ -1.99
RRP42YDL111C YOR186WQ08560 144 aa2.61□□□□□ -1.99
RRP42YDL111C YDL211CQ12121 372 aa2.61□□□□□ -1.99
RRP42YDL111C YPL150WQ12152 901 aa2.61□□□□□ -1.99
RRP42YDL111C YPS3Q12303 508 aa2.61□□□□□ -1.99
RRP42YDL111C JLP1Q12358 412 aa2.61□□□□□ -1.99
RRP42YDL111C MER1P16523 270 aa2.6□□□□□ -1.99
RRP42YDL111C TAF14P35189 244 aa2.6□□□□□ -1.99
RRP42YDL111C TRM7P38238 310 aaKnown RBP2.6□□□□□ -1.99
RRP42YDL111C TRR2P38816 342 aa2.6□□□□□ -1.99
RRP42YDL111C TEM1P38987 245 aa2.6□□□□□ -1.99
RRP42YDL111C TRM9P49957 279 aa2.6□□□□□ -1.99
RRP42YDL111C MGA1P53050 456 aa2.6□□□□□ -1.99
RRP42YDL111C FYV6P53913 173 aa2.6□□□□□ -1.99
RRP42YDL111C SNZ1Q03148 297 aa2.6□□□□□ -1.99
RRP42YDL111C ECM11Q04110 302 aa2.6□□□□□ -1.99
RRP42YDL111C HEM25Q07534 307 aa2.6□□□□□ -1.99
RRP42YDL111C ABP140Q08641 628 aaKnown RBP2.6□□□□□ -1.99
RRP42YDL111C YPL264CQ08980 353 aa2.6□□□□□ -1.99
RRP42YDL111C YRA1Q12159 226 aaKnown RBP2.6□□□□□ -1.99
RRP42YDL111C TPO4Q12256 659 aa2.6□□□□□ -1.99
RRP42YDL111C YBL008W-AQ3E821 79 aa2.6□□□□□ -1.99
RRP42YDL111C RPL28P02406 149 aaKnown RBP2.59□□□□□ -1.99
RRP42YDL111C YOL163WP0CF20 169 aa2.59□□□□□ -1.99
RRP42YDL111C YAK1P14680 807 aa2.59□□□□□ -1.99
RRP42YDL111C ERD2P18414 219 aa2.59□□□□□ -1.99
RRP42YDL111C PRE7P23724 241 aaKnown RBP2.59□□□□□ -1.99
RRP42YDL111C IDH1P28834 360 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
RRP42YDL111C ASF2P32448 525 aaPredicted RBP2.59□□□□□ -1.99
RRP42YDL111C SSH1P38353 490 aaKnown RBP2.59□□□□□ -1.99
RRP42YDL111C IKI1P38874 309 aa2.59□□□□□ -1.99
RRP42YDL111C SUR2P38992 349 aa2.59□□□□□ -1.99
RRP42YDL111C NUP57P48837 541 aa2.59□□□□□ -1.99
RRP42YDL111C BRR6P53062 197 aa2.59□□□□□ -1.99
RRP42YDL111C FLC3P53121 802 aa2.59□□□□□ -1.99
RRP42YDL111C YNL046WP53956 172 aa2.59□□□□□ -1.99
RRP42YDL111C YPL039WQ03080 316 aa2.59□□□□□ -1.99
RRP42YDL111C ISD11Q6Q560 94 aa2.59□□□□□ -1.99
RRP42YDL111C YDR157WA0A023PZE8 133 aa2.58□□□□□ -2
RRP42YDL111C YEL009C-AA0A023PZF2 135 aa2.58□□□□□ -2
RRP42YDL111C HTB1P02293 131 aaKnown RBP2.58□□□□□ -2
RRP42YDL111C HTB2P02294 131 aa2.58□□□□□ -2
RRP42YDL111C RPL27AP0C2H6 136 aaKnown RBP2.58□□□□□ -2
RRP42YDL111C RPL27BP0C2H7 136 aaKnown RBP2.58□□□□□ -2
RRP42YDL111C MATALPHA2P0CY08 210 aa2.58□□□□□ -2
RRP42YDL111C HMLALPHA2P0CY09 210 aa2.58□□□□□ -2
RRP42YDL111C SFC1P33303 322 aa2.58□□□□□ -2
RRP42YDL111C YBL081WP38180 368 aaKnown RBP2.58□□□□□ -2
RRP42YDL111C ECM13P38195 257 aa2.58□□□□□ -2
RRP42YDL111C SLX1P38324 304 aa2.58□□□□□ -2
RRP42YDL111C SPL2P38839 148 aa2.58□□□□□ -2
RRP42YDL111C IRC18P47056 224 aa2.58□□□□□ -2
RRP42YDL111C ADO1P47143 340 aaKnown RBP2.58□□□□□ -2
RRP42YDL111C NIF3P53081 288 aa2.58□□□□□ -2
RRP42YDL111C GET1P53192 235 aa2.58□□□□□ -2
RRP42YDL111C SOD1P00445 154 aaKnown RBP2.57□□□□□ -2
RRP42YDL111C URA6P15700 204 aa2.57□□□□□ -2
RRP42YDL111C CBF1P17106 351 aa2.57□□□□□ -2
RRP42YDL111C RFA3P26755 122 aaKnown RBP2.57□□□□□ -2
RRP42YDL111C YER189WP40104 122 aa2.57□□□□□ -2
RRP42YDL111C YFR045WP43617 309 aa2.57□□□□□ -2
RRP42YDL111C YJL028WP47062 111 aa2.57□□□□□ -2
RRP42YDL111C ILM1P47155 203 aa2.57□□□□□ -2
RRP42YDL111C OST3P48439 350 aa2.57□□□□□ -2
RRP42YDL111C ALG13P53178 202 aa2.57□□□□□ -2
RRP42YDL111C YGL034CP53186 121 aa2.57□□□□□ -2
RRP42YDL111C HST4P53688 370 aa2.57□□□□□ -2
RRP42YDL111C YML108WQ03759 105 aa2.57□□□□□ -2
RRP42YDL111C PRR2Q12310 699 aa2.57□□□□□ -2
RRP42YDL111C TIM22Q12328 207 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms