RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W MST27P53176 234 aa3.85□□□□□ -1.79
PTC1YDL006W YGR168CP53293 376 aa3.85□□□□□ -1.79
PTC1YDL006W YGR266WP53326 701 aa3.85□□□□□ -1.79
PTC1YDL006W TPS1Q00764 495 aaKnown RBP3.85□□□□□ -1.79
PTC1YDL006W SPO19Q03029 223 aa3.85□□□□□ -1.79
PTC1YDL006W NAT4Q04751 285 aa3.85□□□□□ -1.79
PTC1YDL006W PAL1Q05518 499 aaKnown RBP3.85□□□□□ -1.79
PTC1YDL006W HTZ1Q12692 134 aaKnown RBP3.85□□□□□ -1.79
PTC1YDL006W YCR024C-BQ3E7Z8 88 aa3.85□□□□□ -1.79
PTC1YDL006W RHO1P06780 209 aaKnown RBP3.84□□□□□ -1.79
PTC1YDL006W KSS1P14681 368 aa3.84□□□□□ -1.79
PTC1YDL006W MXR2P25566 168 aa3.84□□□□□ -1.79
PTC1YDL006W IDH1P28834 360 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
PTC1YDL006W YEL045CP32616 141 aa3.84□□□□□ -1.79
PTC1YDL006W MRPL6P32904 214 aa3.84□□□□□ -1.79
PTC1YDL006W YOX1P34161 385 aa3.84□□□□□ -1.79
PTC1YDL006W SWD3P38123 315 aa3.84□□□□□ -1.79
PTC1YDL006W GPX2P38143 162 aa3.84□□□□□ -1.79
PTC1YDL006W TDA11P38854 504 aa3.84□□□□□ -1.79
PTC1YDL006W RCY1P39531 840 aa3.84□□□□□ -1.79
PTC1YDL006W HAC1P41546 238 aa3.84□□□□□ -1.79
PTC1YDL006W ALB1P47019 175 aaPredicted RBP3.84□□□□□ -1.79
PTC1YDL006W PRM8P53174 237 aa3.84□□□□□ -1.79
PTC1YDL006W TDA1Q03533 586 aa3.84□□□□□ -1.79
PTC1YDL006W ATG17Q06410 417 aa3.84□□□□□ -1.79
PTC1YDL006W YPR174CQ06616 221 aaPredicted RBP3.84□□□□□ -1.79
PTC1YDL006W YOR214CQ12282 236 aa3.84□□□□□ -1.79
PTC1YDL006W IZH2Q12442 317 aa3.84□□□□□ -1.79
PTC1YDL006W MHF1Q3E835 90 aa3.84□□□□□ -1.79
PTC1YDL006W RIB3Q99258 208 aa3.84□□□□□ -1.79
PTC1YDL006W SLH1P53327 1967 aaKnown RBP3.83□□□□□ -1.8
PTC1YDL006W YSF3P0C074 85 aaPredicted RBP3.83□□□□□ -1.8
PTC1YDL006W GPI12P23797 304 aa3.83□□□□□ -1.8
PTC1YDL006W TIR2P33890 251 aa3.83□□□□□ -1.8
PTC1YDL006W ECM34P38728 170 aa3.83□□□□□ -1.8
PTC1YDL006W GEP4P38812 185 aa3.83□□□□□ -1.8
PTC1YDL006W SPO73P40031 143 aa3.83□□□□□ -1.8
PTC1YDL006W COG3P40094 801 aa3.83□□□□□ -1.8
PTC1YDL006W UTP25P40498 721 aaKnown RBP3.83□□□□□ -1.8
PTC1YDL006W ICE2P40499 491 aa3.83□□□□□ -1.8
PTC1YDL006W YFR057WP43625 151 aa3.83□□□□□ -1.8
PTC1YDL006W JHD2P47156 728 aaPredicted RBP3.83□□□□□ -1.8
PTC1YDL006W YJR141WP47172 347 aaPredicted RBP3.83□□□□□ -1.8
PTC1YDL006W NUP57P48837 541 aa3.83□□□□□ -1.8
PTC1YDL006W TPC1P53257 314 aa3.83□□□□□ -1.8
PTC1YDL006W DBP6P53734 629 aaKnown RBP3.83□□□□□ -1.8
PTC1YDL006W TMA20P89886 181 aaPredicted RBP3.83□□□□□ -1.8
PTC1YDL006W SWP1Q02795 286 aa3.83□□□□□ -1.8
PTC1YDL006W RNH202Q05635 350 aa3.83□□□□□ -1.8
PTC1YDL006W PEX27Q08580 376 aa3.83□□□□□ -1.8
PTC1YDL006W REX3Q12090 404 aa3.83□□□□□ -1.8
PTC1YDL006W RBD2Q12270 262 aa3.83□□□□□ -1.8
PTC1YDL006W YLR126CQ12288 251 aa3.83□□□□□ -1.8
PTC1YDL006W PCL9Q12477 304 aa3.83□□□□□ -1.8
PTC1YDL006W SFG1Q12507 346 aa3.83□□□□□ -1.8
PTC1YDL006W ACC1Q00955 2233 aaKnown RBP3.83□□□□□ -1.8
PTC1YDL006W YOL163WP0CF20 169 aa3.82□□□□□ -1.8
PTC1YDL006W RPL40AP0CH08 128 aaKnown RBP3.82□□□□□ -1.8
PTC1YDL006W RPL40BP0CH09 128 aaKnown RBP3.82□□□□□ -1.8
PTC1YDL006W MRPS28P21771 286 aa3.82□□□□□ -1.8
PTC1YDL006W ITR2P30606 609 aa3.82□□□□□ -1.8
PTC1YDL006W FUN26P31381 517 aa3.82□□□□□ -1.8
PTC1YDL006W VPH2P32341 215 aa3.82□□□□□ -1.8
PTC1YDL006W ECM8P38246 354 aa3.82□□□□□ -1.8
PTC1YDL006W YBR285WP38354 144 aa3.82□□□□□ -1.8
PTC1YDL006W MSS2P40990 351 aa3.82□□□□□ -1.8
PTC1YDL006W GCN20P43535 752 aaKnown RBP3.82□□□□□ -1.8
PTC1YDL006W MPC1P53157 130 aaKnown RBP3.82□□□□□ -1.8
PTC1YDL006W YGR067CP53243 804 aa3.82□□□□□ -1.8
PTC1YDL006W COG5P53951 403 aa3.82□□□□□ -1.8
PTC1YDL006W YMR099CQ03161 297 aaKnown RBP3.82□□□□□ -1.8
PTC1YDL006W INP1Q03694 420 aa3.82□□□□□ -1.8
PTC1YDL006W PSF1Q12488 208 aa3.82□□□□□ -1.8
PTC1YDL006W PBN1P25580 416 aa3.81□□□□□ -1.8
PTC1YDL006W PMT2P31382 759 aa3.81□□□□□ -1.8
PTC1YDL006W MSK1P32048 576 aa3.81□□□□□ -1.8
PTC1YDL006W VAM7P32912 316 aa3.81□□□□□ -1.8
PTC1YDL006W ARC19P33204 171 aaKnown RBP3.81□□□□□ -1.8
PTC1YDL006W RPS20P38701 121 aaKnown RBP3.81□□□□□ -1.8
PTC1YDL006W EGD2P38879 174 aaKnown RBP3.81□□□□□ -1.8
PTC1YDL006W PTI1P39927 425 aaPredicted RBP3.81□□□□□ -1.8
PTC1YDL006W AIM10P39965 576 aaKnown RBP3.81□□□□□ -1.8
PTC1YDL006W PRE5P40302 234 aaKnown RBP3.81□□□□□ -1.8
PTC1YDL006W SOK1P40317 901 aa3.81□□□□□ -1.8
PTC1YDL006W CUP9P41817 306 aa3.81□□□□□ -1.8
PTC1YDL006W BAT2P47176 376 aaKnown RBP3.81□□□□□ -1.8
PTC1YDL006W SYF2P53277 215 aaPredicted RBP3.81□□□□□ -1.8
PTC1YDL006W YLR460CP54007 376 aa3.81□□□□□ -1.8
PTC1YDL006W YMD8Q03697 442 aa3.81□□□□□ -1.8
PTC1YDL006W SMP3Q04174 516 aa3.81□□□□□ -1.8
PTC1YDL006W ARV1Q06541 321 aa3.81□□□□□ -1.8
PTC1YDL006W YDL211CQ12121 372 aa3.81□□□□□ -1.8
PTC1YDL006W PRP46Q12417 451 aaPredicted RBP3.81□□□□□ -1.8
PTC1YDL006W YIL046W-AQ3E7Z4 54 aa3.81□□□□□ -1.8
PTC1YDL006W MED11Q99278 115 aa3.81□□□□□ -1.8
PTC1YDL006W RPC40P07703 335 aaKnown RBP3.8□□□□□ -1.8
PTC1YDL006W TFS1P14306 219 aa3.8□□□□□ -1.8
PTC1YDL006W SNF6P18888 332 aa3.8□□□□□ -1.8
PTC1YDL006W LDB16P25587 256 aa3.8□□□□□ -1.8
PTC1YDL006W RPS5P26783 225 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms