RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	ORT1	Q12375	292 aa		3.23	□□□□□ -1.89
YAL004W	YAL004W	RIB3	Q99258	208 aa		3.23	□□□□□ -1.89
YAL004W	YAL004W	ALG7	P07286	448 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	YAP1	P19880	650 aa	Known RBP	3.22	□□□□□ -1.89
YAL004W	YAL004W	PEX34	P25584	144 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	YCR102C	P25608	368 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	SOL2	P37262	315 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	CHK1	P38147	527 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	VMA22	P38784	181 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	TIM17	P39515	158 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	ERV46	P39727	415 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	MIT1	P40002	666 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	JLP2	P40206	208 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	BMT5	P40493	336 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	CIN2	P46670	268 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	MIC26	P50087	233 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	MGA1	P53050	456 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	MDM34	P53083	459 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	MST27	P53176	234 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	YGR015C	P53208	328 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	FRE4	P53746	719 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	YNL140C	P53910	189 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	COG5	P53951	403 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	YLR460C	P54007	376 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	TIM44	Q01852	431 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	ARC18	Q05933	178 aa	Known RBP	3.22	□□□□□ -1.89
YAL004W	YAL004W	YPR147C	Q06522	304 aa	Known RBP	3.22	□□□□□ -1.89
YAL004W	YAL004W	MHR1	Q06630	226 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	GPI11	Q06636	219 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	RSA1	Q08932	381 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	YOR114W	Q12219	294 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	RPN6	Q12377	434 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	DCN1	Q12395	269 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	MHF2	Q3E829	80 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	DET1	Q99288	334 aa	Known RBP	3.22	□□□□□ -1.89
YAL004W	YAL004W	PET20	Q99373	253 aa		3.22	□□□□□ -1.89
YAL004W	YAL004W	CPA1	P07258	411 aa	Known RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	RPL20A	P0CX23	172 aa	Known RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	RPL20B	P0CX24	172 aa	Predicted RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	ZWF1	P11412	505 aa	Known RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	YCR007C	P25354	239 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	POF1	P25576	258 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	RPL16B	P26785	198 aa	Known RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	UTP11	P34247	250 aa	Predicted RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	RIB5	P38145	238 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	ECM8	P38246	354 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	SHG1	P38337	142 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	PCL5	P38794	229 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	YPT35	P38815	214 aa	Known RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	GGC1	P38988	300 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	PHO90	P39535	881 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	SMB1	P40018	196 aa	Known RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	RGI1	P40043	161 aa	Predicted RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	SIM1	P40472	476 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	MOB1	P40484	314 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	YCH1	P42937	148 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	YJR030C	P47101	745 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	SBH2	P52871	88 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	SWC4	P53201	476 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	ASI3	P53983	676 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	YDC1	Q02896	317 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	EMI1	Q04406	187 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	SWF1	Q04629	336 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	GAL83	Q04739	417 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	YHC1	Q05900	231 aa	Known RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	HEM25	Q07534	307 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	YPL199C	Q08954	240 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	PST1	Q12355	444 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	SNU23	Q12368	194 aa	Predicted RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	YPL119C-A	Q3E751	87 aa		3.21	□□□□□ -1.9
YAL004W	YAL004W	LSO2	Q3E772	92 aa	Known RBP	3.21	□□□□□ -1.9
YAL004W	YAL004W	RAS2	P01120	322 aa	Known RBP	3.2	□□□□□ -1.9
YAL004W	YAL004W	RPS2	P25443	254 aa	Known RBP	3.2	□□□□□ -1.9
YAL004W	YAL004W	EHD3	P28817	500 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	YEF1	P32622	495 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	SDH3	P33421	198 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	YKL187C	P34231	750 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	RCK1	P38622	512 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	GEP4	P38812	185 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	PAC2	P39937	518 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	VRG4	P40107	337 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	MPM1	P40364	252 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	GDS1	P41913	522 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	FAR7	P43592	221 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	IRC7	P43623	340 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	SFH5	P47008	294 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	YGL235W	P53071	178 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	YGL204C	P53089	101 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	MTM1	P53320	366 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	HCH1	P53834	153 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	TDA7	P53882	636 aa	Predicted RBP	3.2	□□□□□ -1.9
YAL004W	YAL004W	SNX41	Q04053	625 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	DIC1	Q06143	298 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	GAT3	Q07928	141 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	YCT1	Q12235	531 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	UTP23	Q12339	254 aa	Known RBP	3.2	□□□□□ -1.9
YAL004W	YAL004W	MED11	Q99278	115 aa		3.2	□□□□□ -1.9
YAL004W	YAL004W	MSB2	P32334	1306 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YKR104W	P0CE69	306 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	TFS1	P14306	219 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms