RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G STE50P25344 346 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G ARO4P32449 370 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G RPC34P32910 317 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G MTC2P34246 357 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G CBT1P36038 271 aaPredicted RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G PMU1P36069 295 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G YBR184WP38299 523 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G SSH1P38353 490 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G MNN9P39107 395 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G TIR3P40552 269 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G RET2P43621 546 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G BUL1P48524 976 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G IMD3P50095 523 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G MTL1P53214 551 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G IMO32P53219 342 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G YGR054WP53235 642 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G RRN9P53437 365 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G RPL21AQ02753 160 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G AIM36Q03798 255 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G TVP15Q03860 143 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G SEC13Q04491 297 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G YLR173WQ06247 608 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G ARO10Q06408 635 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G VTS1Q08831 523 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
tC(GCA)GtC(GCA)G ULA1Q12059 462 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G RIO1Q12196 484 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G NOP56Q12460 504 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
tC(GCA)GtC(GCA)G RPL21BQ12672 160 aaKnown RBP2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G TAR1Q8TGM6 124 aa2.36□□□□□ -2.03
tC(GCA)GtC(GCA)G ADH4P10127 382 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G CCA1P21269 546 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G MEK1P24719 497 aaPredicted RBP2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G MLF3P32047 452 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G RPN2P32565 945 aaKnown RBP2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G ISC10P32645 267 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G ECM31P38122 312 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G ALP1P38971 573 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G SMX2P40204 77 aaKnown RBP2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G CUS2P53830 285 aaPredicted RBP2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G YPL067CQ02754 198 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G STD1Q02794 444 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G RRN5Q02983 363 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G TDA1Q03533 586 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G HMO1Q03973 246 aaKnown RBP2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G YDR415CQ04033 374 aaPredicted RBP2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G ARP10Q04549 284 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G MCH1Q07376 486 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G YLR126CQ12288 251 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G YOL114CQ12322 202 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G BBP1Q12365 385 aa2.35□□□□□ -2.03
tC(GCA)GtC(GCA)G TRP4P07285 380 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G MSS18P08593 268 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G CUP2P15315 225 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G VMA3P25515 160 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G YCR061WP25639 631 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G COQ2P32378 372 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G TMA19P35691 167 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G LAS1P36146 502 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G OLA1P38219 394 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G RTC2P38279 296 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G AMN1P38285 549 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G LIN1P38852 340 aaPredicted RBP2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G YER137CP40083 148 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G HIS6P40545 261 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G LIA1P47120 325 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G MRH4P53166 561 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G YNR048WP53740 393 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G YMR254CQ04838 102 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G ATG26Q06321 1198 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G RRP9Q06506 573 aaKnown RBP2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G YLR413WQ06689 675 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G RFU1Q08003 200 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G SPC3Q12133 184 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G MHF2Q3E829 80 aa2.34□□□□□ -2.03
tC(GCA)GtC(GCA)G RER1P25560 188 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G IMP1P28627 190 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G RAD23P32628 398 aaKnown RBP2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G ALK2P32789 676 aaPredicted RBP2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G YKL075CP36083 450 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G MLH1P38920 769 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G SOP4P39543 234 aaPredicted RBP2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G MTW1P39731 289 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G RPR2P40571 144 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G MID1P41821 548 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G URB2P47108 1174 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G BAT2P47176 376 aaKnown RBP2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G YIP1P53039 248 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G CAX4P53223 239 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G COG2P53271 262 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G OKP1P53298 406 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G HHT1P61830 136 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G COX12Q01519 83 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G TRI1Q05024 226 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G RXT3Q07458 294 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G NDE2Q07500 545 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G SIA1Q12212 622 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G MPD1Q12404 318 aaKnown RBP2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G RIB3Q99258 208 aa2.33□□□□□ -2.04
tC(GCA)GtC(GCA)G REP2P03872 296 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G RPP1BP10622 106 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 88.3 ms