RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDH1	YPR002W	CPR4	P25334	318 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	BUB3	P26449	341 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	FMT1	P32785	401 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	MDL1	P33310	695 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	CHK1	P38147	527 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	CHS7	P38843	316 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	PHO90	P39535	881 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	VPS52	P39904	641 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	BUL1	P48524	976 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	YGL117W	P53133	265 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	NPY1	P53164	384 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	TPC1	P53257	314 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	PBP1	P53297	722 aa	Known RBP	4.91	□□□□□ -1.62
PDH1	YPR002W	RSM27	P53305	110 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	YGR250C	P53316	781 aa	Known RBP	4.91	□□□□□ -1.62
PDH1	YPR002W	AQR1	P53943	586 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	ARG5,6	Q01217	863 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	YMR279C	Q03263	540 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	INP1	Q03694	420 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	NOC4	Q06512	552 aa	Predicted RBP	4.91	□□□□□ -1.62
PDH1	YPR002W	LUC7	Q07508	261 aa	Predicted RBP	4.91	□□□□□ -1.62
PDH1	YPR002W	YOR378W	Q08902	515 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	RTK1	Q12100	620 aa	Predicted RBP	4.91	□□□□□ -1.62
PDH1	YPR002W	PRM4	Q12498	284 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	YJR112W-A	Q3E743	109 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	PET494	P07390	489 aa	Predicted RBP	4.91	□□□□□ -1.62
PDH1	YPR002W	MATALPHA1	P0CY06	175 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	HMLALPHA1	P0CY07	175 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	ZRC1	P20107	442 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	MGR1	P25573	417 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PDH1	YPR002W	SRB5	P32585	307 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	OAR1	P35731	278 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	YKL071W	P36086	256 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	LNP1	P38878	278 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PDH1	YPR002W	PUG1	P40100	303 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	PHB1	P40961	287 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	NIF3	P53081	288 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	YIP4	P53093	235 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	SNO1	Q03144	224 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	SMA2	Q04658	369 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	SYM1	Q06563	197 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	YPR145C-A	Q2V2P0	78 aa		4.91	□□□□□ -1.62
PDH1	YPR002W	CYR1	P08678	2026 aa	Known RBP	4.9	□□□□□ -1.63
PDH1	YPR002W	GAL1	P04385	528 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	GAL7	P08431	366 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	SED4	P25365	1065 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	TIP1	P27654	210 aa	Predicted RBP	4.9	□□□□□ -1.63
PDH1	YPR002W	DBF20	P32328	564 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	FMP46	P36141	133 aa	Known RBP	4.9	□□□□□ -1.63
PDH1	YPR002W	SHM2	P37291	469 aa	Known RBP	4.9	□□□□□ -1.63
PDH1	YPR002W	TRR2	P38816	342 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	PGD1	P40356	397 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	POG1	P40473	351 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	BUD8	P41698	603 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	CIN2	P46670	268 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	LSM8	P47093	109 aa	Known RBP	4.9	□□□□□ -1.63
PDH1	YPR002W	SRB7	P47822	140 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	MPP6	P53725	186 aa	Predicted RBP	4.9	□□□□□ -1.63
PDH1	YPR002W	RHO3	Q00245	231 aa	Known RBP	4.9	□□□□□ -1.63
PDH1	YPR002W	BNA7	Q04066	261 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	HEM25	Q07534	307 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	SET6	Q12529	373 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	NAG1	Q8TGN9	163 aa		4.9	□□□□□ -1.63
PDH1	YPR002W	YLR358C	O13565	187 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	TPI1	P00942	248 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	RPP2A	P05319	106 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	UBI4	P0CG63	381 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	RPL40A	P0CH08	128 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	RPL40B	P0CH09	128 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	NAM2	P11325	894 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	HNM1	P19807	563 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	PET18	P25362	215 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	PPZ2	P33329	710 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	PAN3	P36102	679 aa	Predicted RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	VBA2	P38358	474 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	GPI16	P38875	610 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	AVT7	P40501	490 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	QRI1	P43123	477 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	NSE4	P43124	402 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	GPI14	P47088	403 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	SOL1	P50278	321 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	PNC1	P53184	216 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	MRPL1	Q04599	285 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	CRR1	Q05790	422 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	MRPL51	Q06090	140 aa	Predicted RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	BER1	Q06688	274 aa	Known RBP	4.89	□□□□□ -1.63
PDH1	YPR002W	YPD1	Q07688	167 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	GUP2	Q08929	609 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	YPR063C	Q12160	140 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	ODC2	Q99297	307 aa		4.89	□□□□□ -1.63
PDH1	YPR002W	SSA3	P09435	649 aa	Known RBP	4.88	□□□□□ -1.63
PDH1	YPR002W	YFR010W-A	P0C5N0	62 aa		4.88	□□□□□ -1.63
PDH1	YPR002W	URA6	P15700	204 aa		4.88	□□□□□ -1.63
PDH1	YPR002W	TRS65	P32893	560 aa		4.88	□□□□□ -1.63
PDH1	YPR002W	MSN4	P33749	630 aa		4.88	□□□□□ -1.63
PDH1	YPR002W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
PDH1	YPR002W	APD1	P38281	316 aa		4.88	□□□□□ -1.63
PDH1	YPR002W	ERV15	P38312	142 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms