RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	COQ3	P27680	312 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	ATS1	P31386	333 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	ERG24	P32462	438 aa	Known RBP	4.93	□□□□□ -1.62
HFI1	YPL254W	ECT1	P33412	323 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	ECM15	P35195	104 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	UME6	P39001	836 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	OSW5	P40219	148 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	UBC12	P52491	188 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	YGR042W	P53227	271 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	YGR067C	P53243	804 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	YNR062C	P53748	327 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	SNO4	Q04902	237 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	YOR365C	Q08844	703 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	HSP33	Q08914	237 aa	Known RBP	4.93	□□□□□ -1.62
HFI1	YPL254W	FMP40	Q08968	688 aa	Predicted RBP	4.93	□□□□□ -1.62
HFI1	YPL254W	HSP32	Q08992	237 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	ARG80	P07249	177 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	MRP1	P10662	321 aa	Known RBP	4.92	□□□□□ -1.62
HFI1	YPL254W	CDC23	P16522	626 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	ITR1	P30605	584 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	SRB5	P32585	307 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	VPS17	P32913	551 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	MRPL37	P36532	105 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	MAL32	P38158	584 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	ANS1	P38832	159 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	ZIM17	P42844	174 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	ALB1	P47019	175 aa	Predicted RBP	4.92	□□□□□ -1.62
HFI1	YPL254W	BNA1	P47096	177 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	LYS20	P48570	428 aa	Known RBP	4.92	□□□□□ -1.62
HFI1	YPL254W	VHT1	P53241	593 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	TPC1	P53257	314 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	MAL12	P53341	584 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	ERV25	P54837	211 aa	Known RBP	4.92	□□□□□ -1.62
HFI1	YPL254W	BUD25	P85052	153 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	YDR249C	Q03787	373 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	AEP3	Q12089	606 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	CRC1	Q12289	327 aa		4.92	□□□□□ -1.62
HFI1	YPL254W	RPS14A	P06367	137 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	FUS3	P16892	353 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	CAM1	P29547	415 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	VMA8	P32610	256 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	RML2	P32611	393 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	FMP46	P36141	133 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	RRP3	P38712	501 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	RPS14B	P39516	138 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	PHO90	P39535	881 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	NAS2	P40555	220 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	SFH5	P47008	294 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	TAD2	P47058	250 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	KAP120	Q02932	1032 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	UTP15	Q04305	513 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	DCR2	Q05924	578 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	BRX1	Q08235	291 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	ATP16	Q12165	160 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	YOL107W	Q12239	342 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	EAF3	Q12432	401 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	PSF1	Q12488	208 aa		4.91	□□□□□ -1.62
HFI1	YPL254W	DET1	Q99288	334 aa	Known RBP	4.91	□□□□□ -1.62
HFI1	YPL254W	QCR7	P00128	127 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	GAL4	P04386	881 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	YPK2	P18961	677 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	SCL1	P21243	252 aa	Known RBP	4.9	□□□□□ -1.62
HFI1	YPL254W	CPR2	P23285	205 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	HXT2	P23585	541 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	CNB1	P25296	175 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	FUN19	P28003	413 aa	Predicted RBP	4.9	□□□□□ -1.62
HFI1	YPL254W	MRP20	P32387	263 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	CDC13	P32797	924 aa	Known RBP	4.9	□□□□□ -1.62
HFI1	YPL254W	TIM12	P32830	109 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	SFK1	P35735	353 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	CBT1	P36038	271 aa	Predicted RBP	4.9	□□□□□ -1.62
HFI1	YPL254W	LSM12	P38828	187 aa	Known RBP	4.9	□□□□□ -1.62
HFI1	YPL254W	VPS52	P39904	641 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	ICE2	P40499	491 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	YIL060W	P40519	144 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	YIL024C	P40543	189 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	ALK1	P43633	760 aa	Known RBP	4.9	□□□□□ -1.62
HFI1	YPL254W	LSM1	P47017	172 aa	Known RBP	4.9	□□□□□ -1.62
HFI1	YPL254W	YJR111C	P47148	283 aa	Known RBP	4.9	□□□□□ -1.62
HFI1	YPL254W	TDA7	P53882	636 aa	Predicted RBP	4.9	□□□□□ -1.62
HFI1	YPL254W	HXT11	P54862	567 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	YLR031W	Q07978	186 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	HRT1	Q08273	121 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	YJR112W-A	Q3E743	109 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	YHR213W-A	Q8TGT4	77 aa		4.9	□□□□□ -1.62
HFI1	YPL254W	COX9	P07255	59 aa		4.89	□□□□□ -1.63
HFI1	YPL254W	FUR1	P18562	216 aa	Known RBP	4.89	□□□□□ -1.63
HFI1	YPL254W	BUB3	P26449	341 aa		4.89	□□□□□ -1.63
HFI1	YPL254W	MRP17	P28778	131 aa		4.89	□□□□□ -1.63
HFI1	YPL254W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
HFI1	YPL254W	SUA5	P32579	426 aa		4.89	□□□□□ -1.63
HFI1	YPL254W	MNL1	P38888	796 aa		4.89	□□□□□ -1.63
HFI1	YPL254W	LYS1	P38998	373 aa	RIP-Chip data	4.89	□□□□□ -1.63	not detected
HFI1	YPL254W	SSO2	P39926	295 aa		4.89	□□□□□ -1.63
HFI1	YPL254W	YNL208W	P40159	199 aa	Known RBP	4.89	□□□□□ -1.63
HFI1	YPL254W	YMR144W	P40214	342 aa	Known RBP	4.89	□□□□□ -1.63
HFI1	YPL254W	YNR061C	P53747	219 aa		4.89	□□□□□ -1.63
HFI1	YPL254W	CAF40	P53829	373 aa		4.89	□□□□□ -1.63
HFI1	YPL254W	SEC13	Q04491	297 aa	Known RBP	4.89	□□□□□ -1.63
HFI1	YPL254W	SNT309	Q06091	175 aa	Predicted RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms