RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
PEX6	YNL329C	IMP3	P32899	183 aa	Predicted RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	YPC1	P38298	316 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	LSM12	P38828	187 aa	Known RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	SLM1	P40485	686 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	RPS12	P48589	143 aa	Known RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	PRP38	Q00723	242 aa	Predicted RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	YMR027W	Q04371	470 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	FUS2	Q05670	677 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	FAR10	Q06001	478 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	GMC2	Q06201	188 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	YLR173W	Q06247	608 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	NOT5	Q12514	560 aa	Predicted RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	SNA3	P14359	133 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	PEX3	P28795	441 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	SWD3	P38123	315 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	YBR032W	P38223	100 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	PTI1	P39927	425 aa	Predicted RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	FMP32	P43557	207 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	IGD1	P43598	195 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	CTS2	Q06350	511 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	YPR064W	Q12492	139 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	RPL31A	P0C2H8	113 aa	Known RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	GCN3	P14741	305 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	BGL2	P15703	313 aa	Known RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	MET16	P18408	261 aa	Predicted RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	CDC50	P25656	391 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	VPH2	P32341	215 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	NUP2	P32499	720 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	CSE1	P33307	960 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	POP4	P38336	279 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	AVT6	P40074	448 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	YER186C	P40101	306 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	HPM1	P40481	377 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	COG5	P53951	403 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	SUR7	P54003	302 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	MRX9	Q07349	420 aa	Known RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	YET3	Q07451	203 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	RRG7	Q08774	242 aa	Predicted RBP	2.6	□□□□□ -1.99
PEX6	YNL329C	UIP4	Q08926	304 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	SRO7	Q12038	1033 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	MED4	Q12343	284 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	YCL012C	Q8J0M4	134 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	FLO11	P08640	1367 aa		2.6	□□□□□ -1.99
PEX6	YNL329C	COX2	P00410	251 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	ASP3-2	P0CX77	362 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	ASP3-3	P0CX78	362 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	ASP3-4	P0CX79	362 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	ASP3-1	P0CZ17	362 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	YPK2	P18961	677 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	CKA2	P19454	339 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	TPS2	P31688	896 aa	Known RBP	2.59	□□□□□ -1.99
PEX6	YNL329C	MRX3	P38172	270 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	BOR1	P53838	576 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	IMP4	P53941	290 aa	Known RBP	2.59	□□□□□ -1.99
PEX6	YNL329C	YMR209C	Q03648	457 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	PAL1	Q05518	499 aa	Known RBP	2.59	□□□□□ -1.99
PEX6	YNL329C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
PEX6	YNL329C	BBP1	Q12365	385 aa		2.59	□□□□□ -1.99
PEX6	YNL329C	PHO2	P07269	559 aa		2.59	□□□□□ -2
PEX6	YNL329C	YRB2	P40517	327 aa		2.59	□□□□□ -2
PEX6	YNL329C	REE1	P40893	198 aa		2.59	□□□□□ -2
PEX6	YNL329C	VMA10	P48836	114 aa	Known RBP	2.59	□□□□□ -2
PEX6	YNL329C	VEL1	P53058	206 aa		2.59	□□□□□ -2
PEX6	YNL329C	RPL21A	Q02753	160 aa	Known RBP	2.59	□□□□□ -2
PEX6	YNL329C	YPL077C	Q02831	240 aa		2.59	□□□□□ -2
PEX6	YNL329C	MRX11	Q03079	207 aa		2.59	□□□□□ -2
PEX6	YNL329C	SSQ1	Q05931	657 aa	Predicted RBP	2.59	□□□□□ -2
PEX6	YNL329C	DTD1	Q07648	150 aa	Known RBP	2.59	□□□□□ -2
PEX6	YNL329C	VIK1	Q12045	647 aa		2.59	□□□□□ -2
PEX6	YNL329C	CDC36	P06100	191 aa	Predicted RBP	2.58	□□□□□ -2
PEX6	YNL329C	DSF1	P0CX08	502 aa		2.58	□□□□□ -2
PEX6	YNL329C	YNR073C	P0CX09	502 aa		2.58	□□□□□ -2
PEX6	YNL329C	ZRC1	P20107	442 aa		2.58	□□□□□ -2
PEX6	YNL329C	RNP1	P32385	249 aa		2.58	□□□□□ -2
PEX6	YNL329C	ANR2	P36090	516 aa	Predicted RBP	2.58	□□□□□ -2
PEX6	YNL329C	PET8	P38921	284 aa		2.58	□□□□□ -2
PEX6	YNL329C	ORM1	P53224	222 aa		2.58	□□□□□ -2
PEX6	YNL329C	TMA20	P89886	181 aa	Predicted RBP	2.58	□□□□□ -2
PEX6	YNL329C	OST6	Q03723	332 aa		2.58	□□□□□ -2
PEX6	YNL329C	CSN9	Q03981	162 aa		2.58	□□□□□ -2
PEX6	YNL329C	YMR226C	Q05016	267 aa	Known RBP	2.58	□□□□□ -2
PEX6	YNL329C	GIS3	Q12418	502 aa		2.58	□□□□□ -2
PEX6	YNL329C	STE7	P06784	515 aa		2.58	□□□□□ -2
PEX6	YNL329C	NSP1	P14907	823 aa	Known RBP	2.58	□□□□□ -2
PEX6	YNL329C	PTC1	P35182	281 aa		2.58	□□□□□ -2
PEX6	YNL329C	RTC3	P38804	111 aa	Predicted RBP	2.58	□□□□□ -2
PEX6	YNL329C	PMT4	P46971	762 aa		2.58	□□□□□ -2
PEX6	YNL329C	VAC7	P53950	1165 aa		2.58	□□□□□ -2
PEX6	YNL329C	GMC1	Q04399	608 aa		2.58	□□□□□ -2
PEX6	YNL329C	GIM5	Q04493	163 aa		2.58	□□□□□ -2
PEX6	YNL329C	SPC2	Q04969	178 aa		2.58	□□□□□ -2
PEX6	YNL329C	SEC10	Q06245	871 aa		2.58	□□□□□ -2
PEX6	YNL329C	BRX1	Q08235	291 aa	Known RBP	2.58	□□□□□ -2
PEX6	YNL329C	SFM1	Q12314	213 aa		2.58	□□□□□ -2
PEX6	YNL329C	WTM1	Q12363	437 aa	Known RBP	2.58	□□□□□ -2
PEX6	YNL329C	SAL1	D6W196	494 aa		2.57	□□□□□ -2
PEX6	YNL329C	HIS1	P00498	297 aa	Known RBP	2.57	□□□□□ -2
PEX6	YNL329C	UBC8	P28263	218 aa		2.57	□□□□□ -2
PEX6	YNL329C	SPT4	P32914	102 aa	Predicted RBP	2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms