RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF1	YLR399C	VNX1	P42839	908 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	YFR020W	P43600	232 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	TMA17	Q12513	150 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	RPS21B	Q3E754	87 aa	Known RBP	11.16	□□□□□ -0.62
BDF1	YLR399C	LAC1	P28496	418 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	GCS1	P35197	352 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	SAF1	P38352	637 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	CHS7	P38843	316 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	PRP39	P39682	629 aa	Known RBP	11.16	□□□□□ -0.62
BDF1	YLR399C	NOP16	P40007	231 aa	Known RBP	11.16	□□□□□ -0.62
BDF1	YLR399C	SYS1	P41544	203 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	SLS1	P42900	643 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	YGL204C	P53089	101 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	NPY1	P53164	384 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	SGF73	P53165	657 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	CTF19	Q02732	369 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	AIM6	Q07716	390 aa		11.16	□□□□□ -0.62
BDF1	YLR399C	STE7	P06784	515 aa		11.15	□□□□□ -0.62
BDF1	YLR399C	RIP1	P08067	215 aa		11.15	□□□□□ -0.62
BDF1	YLR399C	HNM1	P19807	563 aa		11.15	□□□□□ -0.62
BDF1	YLR399C	RNQ1	P25367	405 aa		11.15	□□□□□ -0.62
BDF1	YLR399C	FUB1	P25659	250 aa		11.15	□□□□□ -0.62
BDF1	YLR399C	DCG1	P32460	244 aa		11.15	□□□□□ -0.62
BDF1	YLR399C	MTC7	P32633	139 aa		11.15	□□□□□ -0.62
BDF1	YLR399C	MGM101	P32787	269 aa	Known RBP	11.15	□□□□□ -0.62
BDF1	YLR399C	POP8	P38208	133 aa		11.15	□□□□□ -0.62
BDF1	YLR399C	RSM10	Q03201	203 aa		11.15	□□□□□ -0.62
BDF1	YLR399C	TMA7	Q3E764	64 aa	Known RBP	11.15	□□□□□ -0.62
BDF1	YLR399C	PRE9	P23638	258 aa	Known RBP	11.15	□□□□□ -0.63
BDF1	YLR399C	PRM1	P53835	661 aa		11.15	□□□□□ -0.63
BDF1	YLR399C	DPB4	Q04603	196 aa	Known RBP	11.15	□□□□□ -0.63
BDF1	YLR399C	YNR034W-A	Q3E841	98 aa		11.15	□□□□□ -0.63
BDF1	YLR399C	GAL4	P04386	881 aa		11.14	□□□□□ -0.63
BDF1	YLR399C	MCK1	P21965	375 aa	Known RBP	11.14	□□□□□ -0.63
BDF1	YLR399C	POP5	P28005	173 aa		11.14	□□□□□ -0.63
BDF1	YLR399C	ECM15	P35195	104 aa		11.14	□□□□□ -0.63
BDF1	YLR399C	GMH1	P36125	273 aa		11.14	□□□□□ -0.63
BDF1	YLR399C	BNS1	P50084	137 aa		11.14	□□□□□ -0.63
BDF1	YLR399C	TMA23	Q03525	211 aa		11.14	□□□□□ -0.63
BDF1	YLR399C	CHO1	P08456	276 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	HVG1	P0CE11	249 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	ATG15	P25641	520 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	11.13	□□□□□ -0.63	not detected
BDF1	YLR399C	SEF1	P34228	1148 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	CBS1	P14066	229 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	RRP3	P38712	501 aa	Known RBP	11.13	□□□□□ -0.63
BDF1	YLR399C	MET30	P39014	640 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	SPC25	P40014	221 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	AGE2	P40529	298 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	GPI14	P47088	403 aa	Known RBP	11.13	□□□□□ -0.63
BDF1	YLR399C	TEX1	P53851	422 aa	Known RBP	11.13	□□□□□ -0.63
BDF1	YLR399C	GMC1	Q04399	608 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	AVO2	Q04749	426 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	BNA5	Q05979	453 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	MEX67	Q99257	599 aa	Known RBP	11.13	□□□□□ -0.63
BDF1	YLR399C	MPD2	Q99316	277 aa		11.13	□□□□□ -0.63
BDF1	YLR399C	URA6	P15700	204 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	PRO1	P32264	428 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	BTT1	P40314	149 aa	Predicted RBP	11.12	□□□□□ -0.63
BDF1	YLR399C	DLS1	P40366	167 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	YNR021W	P53723	404 aa	Known RBP	11.12	□□□□□ -0.63
BDF1	YLR399C	CCE1	Q03702	353 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	HEM25	Q07534	307 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	YPL272C	Q08984	517 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	ORT1	Q12375	292 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	PET20	Q99373	253 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	FMT1	P32785	401 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	MRPL11	P36521	249 aa	Predicted RBP	11.12	□□□□□ -0.63
BDF1	YLR399C	RRN10	P38204	145 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	MOB2	P43563	287 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	NRG1	Q03125	231 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	YMR178W	Q03219	274 aa	Known RBP	11.12	□□□□□ -0.63
BDF1	YLR399C	RDR1	Q08904	546 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	SRO7	Q12038	1033 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	MMP1	Q12372	583 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	COA6	Q3E846	104 aa		11.12	□□□□□ -0.63
BDF1	YLR399C	SPT23	P35210	1082 aa		11.11	□□□□□ -0.63
BDF1	YLR399C	FAT1	P38225	669 aa		11.11	□□□□□ -0.63
BDF1	YLR399C	UIP3	P39547	235 aa		11.11	□□□□□ -0.63
BDF1	YLR399C	GIM4	P40005	111 aa	Known RBP	11.11	□□□□□ -0.63
BDF1	YLR399C	AVT7	P40501	490 aa		11.11	□□□□□ -0.63
BDF1	YLR399C	MGA1	P53050	456 aa		11.11	□□□□□ -0.63
BDF1	YLR399C	SMX3	P54999	86 aa	Predicted RBP	11.11	□□□□□ -0.63
BDF1	YLR399C	CPR4	P25334	318 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	OAR1	P35731	278 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	ELF1	P36053	145 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	YML083C	Q04526	418 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	CTR3	Q06686	241 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	YDL211C	Q12121	372 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	YOR015W	Q12169	119 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	FYV7	Q12247	151 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	ADK2	P26364	225 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	RFA2	P26754	273 aa	Known RBP	11.1	□□□□□ -0.63
BDF1	YLR399C	GIP2	P40036	548 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	BXI1	P48558	297 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	UFD1	P53044	361 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	YIP4	P53093	235 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	PDR16	P53860	351 aa	Known RBP	11.1	□□□□□ -0.63
BDF1	YLR399C	STD1	Q02794	444 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	SYM1	Q06563	197 aa		11.1	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms