RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C GIS1Q03833 894 aa2.14□□□□□ -2.07
VPS13YLL040C YDR391CQ04170 232 aa2.14□□□□□ -2.07
VPS13YLL040C BSC6Q08280 497 aa2.14□□□□□ -2.07
VPS13YLL040C NIP7Q08962 181 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C MEX67Q99257 599 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C OMA1P36163 345 aa2.14□□□□□ -2.07
VPS13YLL040C NSA1P53136 463 aaPredicted RBP2.14□□□□□ -2.07
VPS13YLL040C DBP6P53734 629 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C INN1P53901 409 aa2.14□□□□□ -2.07
VPS13YLL040C YLR257WQ06146 321 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C ATG33Q06485 197 aa2.14□□□□□ -2.07
VPS13YLL040C AKR2Q12013 749 aa2.14□□□□□ -2.07
VPS13YLL040C YOR032W-AQ8TGS1 66 aa2.14□□□□□ -2.07
VPS13YLL040C EHD3P28817 500 aa2.13□□□□□ -2.07
VPS13YLL040C TIM12P32830 109 aa2.13□□□□□ -2.07
VPS13YLL040C SLC1P33333 303 aa2.13□□□□□ -2.07
VPS13YLL040C GLY1P37303 387 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C SKN7P38889 622 aa2.13□□□□□ -2.07
VPS13YLL040C TIR3P40552 269 aa2.13□□□□□ -2.07
VPS13YLL040C FRE4P53746 719 aa2.13□□□□□ -2.07
VPS13YLL040C YDR262WQ12331 272 aa2.13□□□□□ -2.07
VPS13YLL040C CDC21P06785 304 aa2.13□□□□□ -2.07
VPS13YLL040C CBP6P07253 162 aaPredicted RBP2.13□□□□□ -2.07
VPS13YLL040C NAR1P23503 491 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C MIA40P36046 403 aa2.13□□□□□ -2.07
VPS13YLL040C CHK1P38147 527 aa2.13□□□□□ -2.07
VPS13YLL040C URA8P38627 578 aaPredicted RBP2.13□□□□□ -2.07
VPS13YLL040C PRS3P38689 320 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C MOB1P40484 314 aa2.13□□□□□ -2.07
VPS13YLL040C CSL4P53859 292 aaPredicted RBP2.13□□□□□ -2.07
VPS13YLL040C YNL165WP53891 406 aa2.13□□□□□ -2.07
VPS13YLL040C CDA2Q06703 312 aa2.13□□□□□ -2.07
VPS13YLL040C PML1Q07930 204 aaPredicted RBP2.13□□□□□ -2.07
VPS13YLL040C YLR099W-AQ3E798 87 aa2.13□□□□□ -2.07
VPS13YLL040C ARO7P32178 256 aa2.13□□□□□ -2.07
VPS13YLL040C MRPL15P36523 253 aa2.13□□□□□ -2.07
VPS13YLL040C RPA34P47006 233 aaPredicted RBP2.13□□□□□ -2.07
VPS13YLL040C IBA57P47158 497 aa2.13□□□□□ -2.07
VPS13YLL040C MRPL19P53875 158 aa2.13□□□□□ -2.07
VPS13YLL040C GPI15P53961 229 aa2.13□□□□□ -2.07
VPS13YLL040C SAM50P53969 484 aa2.13□□□□□ -2.07
VPS13YLL040C SOD2P00447 233 aa2.13□□□□□ -2.07
VPS13YLL040C SNC2P33328 115 aa2.13□□□□□ -2.07
VPS13YLL040C TCM62P38228 572 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C PCL5P38794 229 aa2.13□□□□□ -2.07
VPS13YLL040C SLS1P42900 643 aa2.13□□□□□ -2.07
VPS13YLL040C MOG1P47123 218 aa2.13□□□□□ -2.07
VPS13YLL040C VHT1P53241 593 aa2.13□□□□□ -2.07
VPS13YLL040C YFH1Q07540 174 aa2.13□□□□□ -2.07
VPS13YLL040C YDL085C-AQ3E7B7 68 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C YCP4P25349 247 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C PET18P25362 215 aa2.13□□□□□ -2.07
VPS13YLL040C ADK2P26364 225 aa2.13□□□□□ -2.07
VPS13YLL040C SRP102P36057 244 aaPredicted RBP2.13□□□□□ -2.07
VPS13YLL040C TRM7P38238 310 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C SAM37P50110 327 aa2.13□□□□□ -2.07
VPS13YLL040C YMR082CQ04276 118 aa2.13□□□□□ -2.07
VPS13YLL040C ORT1Q12375 292 aa2.13□□□□□ -2.07
VPS13YLL040C CDC9P04819 755 aa2.13□□□□□ -2.07
VPS13YLL040C MRPL44P19956 98 aa2.13□□□□□ -2.07
VPS13YLL040C GAR1P28007 205 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C CDS1P38221 457 aa2.13□□□□□ -2.07
VPS13YLL040C NPY1P53164 384 aa2.13□□□□□ -2.07
VPS13YLL040C MEP3P53390 489 aa2.13□□□□□ -2.07
VPS13YLL040C CTS2Q06350 511 aa2.13□□□□□ -2.07
VPS13YLL040C YPL264CQ08980 353 aa2.13□□□□□ -2.07
VPS13YLL040C SPC3Q12133 184 aa2.13□□□□□ -2.07
VPS13YLL040C TFC7Q12415 435 aa2.13□□□□□ -2.07
VPS13YLL040C IZH2Q12442 317 aa2.13□□□□□ -2.07
VPS13YLL040C FUR4P05316 633 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C YML003WP0CF16 290 aa2.13□□□□□ -2.07
VPS13YLL040C ATG8P38182 117 aaRIP-Chip data2.13□□□□□ -2.07not detected
VPS13YLL040C INM1P38710 295 aa2.13□□□□□ -2.07
VPS13YLL040C NCE101Q02820 53 aa2.13□□□□□ -2.07
VPS13YLL040C AGE1Q04412 482 aa2.13□□□□□ -2.07
VPS13YLL040C MRX9Q07349 420 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C BMT6Q12291 365 aa2.13□□□□□ -2.07
VPS13YLL040C CKA1P15790 372 aa2.13□□□□□ -2.07
VPS13YLL040C CDC12P32468 407 aaKnown RBP2.13□□□□□ -2.07
VPS13YLL040C RRN10P38204 145 aa2.13□□□□□ -2.07
VPS13YLL040C YBR197CP38306 217 aa2.13□□□□□ -2.07
VPS13YLL040C YGL262WP53054 175 aa2.13□□□□□ -2.07
VPS13YLL040C MTQ1P53944 314 aa2.13□□□□□ -2.07
VPS13YLL040C YLR036CQ07986 203 aa2.13□□□□□ -2.07
VPS13YLL040C PCC1Q3E833 88 aa2.13□□□□□ -2.07
VPS13YLL040C MRPL33P20084 86 aa2.12□□□□□ -2.07
VPS13YLL040C VPS62P53285 467 aa2.12□□□□□ -2.07
VPS13YLL040C LYS21Q12122 440 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C TY1A-BRQ12217 440 aa2.12□□□□□ -2.07
VPS13YLL040C NPR1P22211 790 aa2.12□□□□□ -2.07
VPS13YLL040C RNA14P25298 677 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C FAF1P40546 346 aaPredicted RBP2.12□□□□□ -2.07
VPS13YLL040C YFL054CP43549 646 aa2.12□□□□□ -2.07
VPS13YLL040C SFB2P53953 876 aa2.12□□□□□ -2.07
VPS13YLL040C ARG5,6Q01217 863 aa2.12□□□□□ -2.07
VPS13YLL040C BER1Q06688 274 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C MCH1Q07376 486 aa2.12□□□□□ -2.07
VPS13YLL040C YLR365WQ7LIF2 110 aa2.12□□□□□ -2.07
VPS13YLL040C CDC28P00546 298 aaKnown RBP2.12□□□□□ -2.07
VPS13YLL040C GAL4P04386 881 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms