RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C FDH1Q08911 376 aa2.97□□□□□ -1.93
YIR040CYIR040C YOR012WQ12351 137 aa2.97□□□□□ -1.93
YIR040CYIR040C GTT2Q12390 233 aa2.97□□□□□ -1.93
YIR040CYIR040C YPR1Q12458 312 aa2.97□□□□□ -1.93
YIR040CYIR040C RMD5Q12508 421 aa2.97□□□□□ -1.93
YIR040CYIR040C YDL085C-AQ3E7B7 68 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C YCL012CQ8J0M4 134 aa2.97□□□□□ -1.93
YIR040CYIR040C IZH4Q99393 312 aa2.97□□□□□ -1.93
YIR040CYIR040C HIS1P00498 297 aaKnown RBP2.96□□□□□ -1.94
YIR040CYIR040C RPL28P02406 149 aaKnown RBP2.96□□□□□ -1.94
YIR040CYIR040C YLL053CP0CD98 152 aa2.96□□□□□ -1.94
YIR040CYIR040C RPL18AP0CX49 186 aaKnown RBP2.96□□□□□ -1.94
YIR040CYIR040C RPL18BP0CX50 186 aaKnown RBP2.96□□□□□ -1.94
YIR040CYIR040C CTA1P15202 515 aa2.96□□□□□ -1.94
YIR040CYIR040C CPT1P17898 393 aa2.96□□□□□ -1.94
YIR040CYIR040C NUP1P20676 1076 aa2.96□□□□□ -1.94
YIR040CYIR040C SCO1P23833 295 aa2.96□□□□□ -1.94
YIR040CYIR040C GAC1P28006 793 aa2.96□□□□□ -1.94
YIR040CYIR040C ARO7P32178 256 aa2.96□□□□□ -1.94
YIR040CYIR040C RIM1P32445 135 aaKnown RBP2.96□□□□□ -1.94
YIR040CYIR040C NRP1P32770 719 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
YIR040CYIR040C THI2P38141 450 aa2.96□□□□□ -1.94
YIR040CYIR040C QDR3P38227 689 aa2.96□□□□□ -1.94
YIR040CYIR040C RTC2P38279 296 aa2.96□□□□□ -1.94
YIR040CYIR040C IPI1P38803 334 aaPredicted RBP2.96□□□□□ -1.94
YIR040CYIR040C PHO90P39535 881 aa2.96□□□□□ -1.94
YIR040CYIR040C YJL193WP39542 402 aa2.96□□□□□ -1.94
YIR040CYIR040C FAU1P40099 211 aa2.96□□□□□ -1.94
YIR040CYIR040C SEC24P40482 926 aaKnown RBP2.96□□□□□ -1.94
YIR040CYIR040C BMT5P40493 336 aa2.96□□□□□ -1.94
YIR040CYIR040C YIL012WP40551 113 aa2.96□□□□□ -1.94
YIR040CYIR040C YIR035CP40579 254 aa2.96□□□□□ -1.94
YIR040CYIR040C GSM1P42950 618 aa2.96□□□□□ -1.94
YIR040CYIR040C YFR057WP43625 151 aa2.96□□□□□ -1.94
YIR040CYIR040C ZAP1P47043 880 aa2.96□□□□□ -1.94
YIR040CYIR040C YIP4P53093 235 aa2.96□□□□□ -1.94
YIR040CYIR040C STR3P53101 465 aaKnown RBP2.96□□□□□ -1.94
YIR040CYIR040C YIP5P53108 310 aa2.96□□□□□ -1.94
YIR040CYIR040C FLC3P53121 802 aa2.96□□□□□ -1.94
YIR040CYIR040C CDH1P53197 566 aa2.96□□□□□ -1.94
YIR040CYIR040C FMP48P53233 369 aa2.96□□□□□ -1.94
YIR040CYIR040C MPA43P53583 542 aaPredicted RBP2.96□□□□□ -1.94
YIR040CYIR040C SHR3Q02774 210 aa2.96□□□□□ -1.94
YIR040CYIR040C STD1Q02794 444 aa2.96□□□□□ -1.94
YIR040CYIR040C NAT4Q04751 285 aa2.96□□□□□ -1.94
YIR040CYIR040C HOF1Q05080 669 aa2.96□□□□□ -1.94
YIR040CYIR040C SEI1Q06058 285 aa2.96□□□□□ -1.94
YIR040CYIR040C YLR446WQ06204 433 aa2.96□□□□□ -1.94
YIR040CYIR040C MRI1Q06489 411 aaKnown RBP2.96□□□□□ -1.94
YIR040CYIR040C HNT3Q08702 217 aa2.96□□□□□ -1.94
YIR040CYIR040C USB1Q12208 290 aaKnown RBP2.96□□□□□ -1.94
YIR040CYIR040C SIA1Q12212 622 aa2.96□□□□□ -1.94
YIR040CYIR040C PRP46Q12417 451 aaPredicted RBP2.96□□□□□ -1.94
YIR040CYIR040C YNL162W-AQ3E7A8 72 aa2.96□□□□□ -1.94
YIR040CYIR040C STU1P38198 1513 aa2.95□□□□□ -1.94
YIR040CYIR040C YDR157WA0A023PZE8 133 aa2.95□□□□□ -1.94
YIR040CYIR040C ATP5P09457 212 aa2.95□□□□□ -1.94
YIR040CYIR040C YML003WP0CF16 290 aa2.95□□□□□ -1.94
YIR040CYIR040C YEL076C-AP0CX16 216 aa2.95□□□□□ -1.94
YIR040CYIR040C YLR464WP0CX17 216 aa2.95□□□□□ -1.94
YIR040CYIR040C FCY2P17064 533 aa2.95□□□□□ -1.94
YIR040CYIR040C GPI12P23797 304 aa2.95□□□□□ -1.94
YIR040CYIR040C LSB5P25369 354 aa2.95□□□□□ -1.94
YIR040CYIR040C MRP49P32388 137 aa2.95□□□□□ -1.94
YIR040CYIR040C SNC2P33328 115 aa2.95□□□□□ -1.94
YIR040CYIR040C YOR062CP36025 268 aa2.95□□□□□ -1.94
YIR040CYIR040C PRY2P36110 329 aa2.95□□□□□ -1.94
YIR040CYIR040C IST2P38250 946 aa2.95□□□□□ -1.94
YIR040CYIR040C GOS1P38736 223 aa2.95□□□□□ -1.94
YIR040CYIR040C DOG1P38774 246 aa2.95□□□□□ -1.94
YIR040CYIR040C YEL076CP39971 216 aa2.95□□□□□ -1.94
YIR040CYIR040C AZF1P41696 914 aa2.95□□□□□ -1.94
YIR040CYIR040C IRC18P47056 224 aa2.95□□□□□ -1.94
YIR040CYIR040C MMS2P53152 137 aa2.95□□□□□ -1.94
YIR040CYIR040C LST7P53237 242 aa2.95□□□□□ -1.94
YIR040CYIR040C CPR8P53728 308 aa2.95□□□□□ -1.94
YIR040CYIR040C TIM8P57744 87 aa2.95□□□□□ -1.94
YIR040CYIR040C AIM11P87275 137 aa2.95□□□□□ -1.94
YIR040CYIR040C YDR209CQ03480 137 aa2.95□□□□□ -1.94
YIR040CYIR040C AIM36Q03798 255 aa2.95□□□□□ -1.94
YIR040CYIR040C SMP3Q04174 516 aa2.95□□□□□ -1.94
YIR040CYIR040C ARR3Q06598 404 aa2.95□□□□□ -1.94
YIR040CYIR040C AFT2Q08957 416 aa2.95□□□□□ -1.94
YIR040CYIR040C KTI11Q3E840 82 aa2.95□□□□□ -1.94
YIR040CYIR040C YBR298C-AQ8TGK4 73 aa2.95□□□□□ -1.94
YIR040CYIR040C RSF2P46974 1380 aa2.95□□□□□ -1.94
YIR040CYIR040C COX5BP00425 151 aa2.94□□□□□ -1.94
YIR040CYIR040C CAR1P00812 333 aaKnown RBP2.94□□□□□ -1.94
YIR040CYIR040C RAD6P06104 172 aa2.94□□□□□ -1.94
YIR040CYIR040C HAP3P13434 144 aa2.94□□□□□ -1.94
YIR040CYIR040C MCK1P21965 375 aaKnown RBP2.94□□□□□ -1.94
YIR040CYIR040C TKL1P23254 680 aaKnown RBP2.94□□□□□ -1.94
YIR040CYIR040C HYP2P23301 157 aaKnown RBP2.94□□□□□ -1.94
YIR040CYIR040C YIH1P25637 258 aa2.94□□□□□ -1.94
YIR040CYIR040C COQ3P27680 312 aa2.94□□□□□ -1.94
YIR040CYIR040C CNE1P27825 502 aa2.94□□□□□ -1.94
YIR040CYIR040C SRB6P32570 121 aa2.94□□□□□ -1.94
YIR040CYIR040C TIR2P33890 251 aa2.94□□□□□ -1.94
YIR040CYIR040C SRY1P36007 326 aa2.94□□□□□ -1.94
YIR040CYIR040C SHE2P36068 246 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms