RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	YGR296C-B	P0CX96	160 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YPL283W-B	P0CX97	160 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YPR204C-A	P0CX98	160 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YFL068W	P0CX99	160 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YLL066W-A	P0CY00	160 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YLL067W-A	P0CY01	160 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	SNF6	P18888	332 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	BUD5	P25300	642 aa	Predicted RBP	3.11	□□□□□ -1.91
SGN1	YIR001C	STE50	P25344	346 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	TCA17	P32613	152 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	RPC34	P32910	317 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	SUR1	P33300	382 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	LTV1	P34078	463 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YKR015C	P36111	568 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	RIB1	P38066	345 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	GPI18	P38211	433 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	PHO90	P39535	881 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	RBG1	P39729	369 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	GZF3	P42944	551 aa	Known RBP	3.11	□□□□□ -1.91
SGN1	YIR001C	RET2	P43621	546 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YJL016W	P47072	561 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	GET1	P53192	235 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	RRN9	P53437	365 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	APJ1	P53940	528 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	RSM23	Q01163	450 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YPL108W	Q02872	168 aa	Predicted RBP	3.11	□□□□□ -1.91
SGN1	YIR001C	YDC1	Q02896	317 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	BCP1	Q06338	283 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	SWA2	Q06677	668 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	MCH4	Q08268	501 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	USV1	Q12132	391 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YDL009C	Q12210	107 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	DPM1	P14020	267 aa	Known RBP	3.1	□□□□□ -1.91
SGN1	YIR001C	STE18	P18852	110 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	MEK1	P24719	497 aa	Predicted RBP	3.1	□□□□□ -1.91
SGN1	YIR001C	PCL1	P24867	279 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	CLB4	P24871	460 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	RRP7	P25368	297 aa	Predicted RBP	3.1	□□□□□ -1.91
SGN1	YIR001C	IES6	P32617	166 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	MCH2	P36032	473 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	SRP102	P36057	244 aa	Predicted RBP	3.1	□□□□□ -1.91
SGN1	YIR001C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	RIP-Chip
SGN1	YIR001C	PAC2	P39937	518 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	SLM1	P40485	686 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	STB1	P42845	420 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	MIG2	P53035	382 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	YGR151C	P53287	111 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	SUB1	P54000	292 aa	Known RBP	3.1	□□□□□ -1.91
SGN1	YIR001C	NUP49	Q02199	472 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	AIM36	Q03798	255 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	MRPL51	Q06090	140 aa	Predicted RBP	3.1	□□□□□ -1.91
SGN1	YIR001C	RAX2	Q12465	1220 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	ADF1	Q2V2Q1	113 aa		3.1	□□□□□ -1.91
SGN1	YIR001C	TDH2	P00358	332 aa	Known RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
SGN1	YIR001C	RPS8A	P0CX39	200 aa	Known RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	RPS8B	P0CX40	200 aa	Known RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	NAM2	P11325	894 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	FRS1	P15624	595 aa	Known RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	FEN2	P25621	512 aa	Known RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	DEG1	P31115	442 aa	Known RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	TFC1	P32367	649 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	PRP19	P32523	503 aa	Known RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	PRY2	P36110	329 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	SKG1	P36169	355 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	FZO1	P38297	855 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	PSD1	P39006	500 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	OST1	P41543	476 aa	Known RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	SFH5	P47008	294 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	NSA1	P53136	463 aa	Predicted RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	NQM1	P53228	333 aa	Predicted RBP	3.09	□□□□□ -1.91
SGN1	YIR001C	YNL095C	P53932	642 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	ASI3	P53983	676 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	GTB1	Q04924	702 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	SPC2	Q04969	178 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	YDL086W	Q07505	273 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	NFI1	Q12216	726 aa		3.09	□□□□□ -1.91
SGN1	YIR001C	DYN1	P36022	4092 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	YAK1	P14680	807 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	ACH1	P32316	526 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	YNK1	P36010	153 aa	Known RBP	3.08	□□□□□ -1.92
SGN1	YIR001C	SPC34	P36131	295 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	TCM62	P38228	572 aa	Known RBP	3.08	□□□□□ -1.92
SGN1	YIR001C	RTC2	P38279	296 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	PEX32	P38292	413 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	YHR035W	P38769	630 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	TIR3	P40552	269 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	UFD1	P53044	361 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	PXR1	P53335	271 aa	Predicted RBP	3.08	□□□□□ -1.92
SGN1	YIR001C	WSC2	P53832	503 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	SPR6	Q01684	191 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	ABZ2	Q03266	374 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	PRP3	Q03338	469 aa	Predicted RBP	3.08	□□□□□ -1.92
SGN1	YIR001C	SPC19	Q03954	165 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	YPR098C	Q06089	161 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	GSH2	Q08220	491 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	SNX3	Q08826	162 aa	Known RBP	3.08	□□□□□ -1.92
SGN1	YIR001C	FCY22	Q12119	530 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	SIA1	Q12212	622 aa		3.08	□□□□□ -1.92
SGN1	YIR001C	MES1	P00958	751 aa	Known RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms