RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W ATG4P53867 494 aa3.12□□□□□ -1.91
BCD1YHR040W LSM7P53905 115 aaKnown RBP3.12□□□□□ -1.91
BCD1YHR040W MSC1Q03104 513 aa3.12□□□□□ -1.91
BCD1YHR040W OST6Q03723 332 aa3.12□□□□□ -1.91
BCD1YHR040W ECM18Q04623 453 aa3.12□□□□□ -1.91
BCD1YHR040W BUR2Q05949 395 aa3.12□□□□□ -1.91
BCD1YHR040W ORM2Q06144 216 aa3.12□□□□□ -1.91
BCD1YHR040W YPR127WQ06494 345 aa3.12□□□□□ -1.91
BCD1YHR040W SKI7Q08491 747 aaPredicted RBP3.12□□□□□ -1.91
BCD1YHR040W PEX27Q08580 376 aa3.12□□□□□ -1.91
BCD1YHR040W YOR289WQ12012 251 aaPredicted RBP3.12□□□□□ -1.91
BCD1YHR040W YDL211CQ12121 372 aa3.12□□□□□ -1.91
BCD1YHR040W YPR022CQ12139 1133 aa3.12□□□□□ -1.91
BCD1YHR040W RTR2Q12378 196 aa3.12□□□□□ -1.91
BCD1YHR040W MEX67Q99257 599 aaKnown RBP3.12□□□□□ -1.91
BCD1YHR040W GAL4P04386 881 aa3.11□□□□□ -1.91
BCD1YHR040W COX9P07255 59 aa3.11□□□□□ -1.91
BCD1YHR040W MRP1P10662 321 aaKnown RBP3.11□□□□□ -1.91
BCD1YHR040W STF2P16965 84 aa3.11□□□□□ -1.91
BCD1YHR040W NUP1P20676 1076 aa3.11□□□□□ -1.91
BCD1YHR040W ATG22P25568 528 aa3.11□□□□□ -1.91
BCD1YHR040W FUN26P31381 517 aa3.11□□□□□ -1.91
BCD1YHR040W ARC19P33204 171 aaKnown RBP3.11□□□□□ -1.91
BCD1YHR040W ZRT3P34240 503 aa3.11□□□□□ -1.91
BCD1YHR040W CLG1P35190 452 aa3.11□□□□□ -1.91
BCD1YHR040W SRX1P36077 127 aa3.11□□□□□ -1.91
BCD1YHR040W YKL071WP36086 256 aa3.11□□□□□ -1.91
BCD1YHR040W FMP46P36141 133 aaKnown RBP3.11□□□□□ -1.91
BCD1YHR040W RPL32P38061 130 aaKnown RBP3.11□□□□□ -1.91
BCD1YHR040W DTR1P38125 572 aa3.11□□□□□ -1.91
BCD1YHR040W PAU24P38155 120 aa3.11□□□□□ -1.91
BCD1YHR040W YBR137WP38276 179 aa3.11□□□□□ -1.91
BCD1YHR040W PHO90P39535 881 aa3.11□□□□□ -1.91
BCD1YHR040W MIT1P40002 666 aa3.11□□□□□ -1.91
BCD1YHR040W SMB1P40018 196 aaKnown RBP3.11□□□□□ -1.91
BCD1YHR040W TIF34P40217 347 aaKnown RBP3.11□□□□□ -1.91
BCD1YHR040W POP1P41812 875 aa3.11□□□□□ -1.91
BCD1YHR040W MNN5P46982 586 aa3.11□□□□□ -1.91
BCD1YHR040W SFH5P47008 294 aa3.11□□□□□ -1.91
BCD1YHR040W LOH1P47055 219 aa3.11□□□□□ -1.91
BCD1YHR040W SNX4P47057 423 aa3.11□□□□□ -1.91
BCD1YHR040W IBA57P47158 497 aa3.11□□□□□ -1.91
BCD1YHR040W PMT5P52867 743 aa3.11□□□□□ -1.91
BCD1YHR040W YGL235WP53071 178 aa3.11□□□□□ -1.91
BCD1YHR040W ORM1P53224 222 aa3.11□□□□□ -1.91
BCD1YHR040W SWS2P53937 143 aa3.11□□□□□ -1.91
BCD1YHR040W SMX3P54999 86 aaPredicted RBP3.11□□□□□ -1.91
BCD1YHR040W MRPS16Q02608 121 aa3.11□□□□□ -1.91
BCD1YHR040W YDR541CQ03049 344 aa3.11□□□□□ -1.91
BCD1YHR040W DML1Q03652 475 aa3.11□□□□□ -1.91
BCD1YHR040W TRS23Q03784 219 aa3.11□□□□□ -1.91
BCD1YHR040W YML096WQ04489 525 aa3.11□□□□□ -1.91
BCD1YHR040W DIC1Q06143 298 aa3.11□□□□□ -1.91
BCD1YHR040W ARV1Q06541 321 aa3.11□□□□□ -1.91
BCD1YHR040W SSK1Q07084 712 aa3.11□□□□□ -1.91
BCD1YHR040W CYK3Q07533 885 aa3.11□□□□□ -1.91
BCD1YHR040W YLR030WQ07967 263 aa3.11□□□□□ -1.91
BCD1YHR040W BRX1Q08235 291 aaKnown RBP3.11□□□□□ -1.91
BCD1YHR040W HNT3Q08702 217 aa3.11□□□□□ -1.91
BCD1YHR040W RRG7Q08774 242 aaPredicted RBP3.11□□□□□ -1.91
BCD1YHR040W MMT2Q08970 484 aa3.11□□□□□ -1.91
BCD1YHR040W YOR283WQ12040 230 aaKnown RBP3.11□□□□□ -1.91
BCD1YHR040W BTS1Q12051 335 aa3.11□□□□□ -1.91
BCD1YHR040W SPC3Q12133 184 aa3.11□□□□□ -1.91
BCD1YHR040W PRM4Q12498 284 aa3.11□□□□□ -1.91
BCD1YHR040W YOS9Q99220 542 aa3.11□□□□□ -1.91
BCD1YHR040W FSH3Q99369 266 aa3.11□□□□□ -1.91
BCD1YHR040W RIP1P08067 215 aa3.1□□□□□ -1.91
BCD1YHR040W MET2P08465 486 aa3.1□□□□□ -1.91
BCD1YHR040W PET54P10834 293 aa3.1□□□□□ -1.91
BCD1YHR040W CDC23P16522 626 aa3.1□□□□□ -1.91
BCD1YHR040W FUN19P28003 413 aaPredicted RBP3.1□□□□□ -1.91
BCD1YHR040W ERG9P29704 444 aa3.1□□□□□ -1.91
BCD1YHR040W PAU2P32612 120 aa3.1□□□□□ -1.91
BCD1YHR040W TRS65P32893 560 aa3.1□□□□□ -1.91
BCD1YHR040W PDR3P33200 976 aa3.1□□□□□ -1.91
BCD1YHR040W MSN4P33749 630 aa3.1□□□□□ -1.91
BCD1YHR040W MRPL15P36523 253 aa3.1□□□□□ -1.91
BCD1YHR040W CHK1P38147 527 aa3.1□□□□□ -1.91
BCD1YHR040W VMA22P38784 181 aa3.1□□□□□ -1.91
BCD1YHR040W PFS1P38872 237 aa3.1□□□□□ -1.91
BCD1YHR040W FET3P38993 636 aa3.1□□□□□ -1.91
BCD1YHR040W VPS52P39904 641 aa3.1□□□□□ -1.91
BCD1YHR040W HPA3P39979 161 aa3.1□□□□□ -1.91
BCD1YHR040W YKE4P40544 346 aa3.1□□□□□ -1.91
BCD1YHR040W HXT9P40885 567 aa3.1□□□□□ -1.91
BCD1YHR040W CIN1P40987 1014 aa3.1□□□□□ -1.91
BCD1YHR040W PMT6P42934 759 aa3.1□□□□□ -1.91
BCD1YHR040W ALB1P47019 175 aaPredicted RBP3.1□□□□□ -1.91
BCD1YHR040W AIM25P47140 327 aa3.1□□□□□ -1.91
BCD1YHR040W CCC1P47818 322 aa3.1□□□□□ -1.91
BCD1YHR040W MRH4P53166 561 aa3.1□□□□□ -1.91
BCD1YHR040W CDH1P53197 566 aa3.1□□□□□ -1.91
BCD1YHR040W VOA1P53262 265 aa3.1□□□□□ -1.91
BCD1YHR040W MTM1P53320 366 aa3.1□□□□□ -1.91
BCD1YHR040W PGA1P53896 198 aa3.1□□□□□ -1.91
BCD1YHR040W OCA2P53949 197 aa3.1□□□□□ -1.91
BCD1YHR040W YLR460CP54007 376 aa3.1□□□□□ -1.91
BCD1YHR040W ERG13P54839 491 aaKnown RBP3.1□□□□□ -1.91
BCD1YHR040W SCS7Q03529 384 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms