RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	ACS2	P52910	683 aa	Known RBP	5.65	□□□□□ -1.5
VMA3	YEL027W	DOC1	P53068	250 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	SLI1	P53304	468 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	PEX10	Q05568	337 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	PEX30	Q06169	523 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	NMA1	Q06178	401 aa	Known RBP	5.65	□□□□□ -1.5
VMA3	YEL027W	PEX27	Q08580	376 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	FRE3	Q08905	711 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	TGS1	Q12052	315 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	TIR4	Q12218	487 aa	Predicted RBP	5.65	□□□□□ -1.5
VMA3	YEL027W	SEC16	P48415	2195 aa	Known RBP	5.65	□□□□□ -1.51
VMA3	YEL027W	COX5B	P00425	151 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	RPS18A	P0CX55	146 aa	Known RBP	5.64	□□□□□ -1.51
VMA3	YEL027W	RPS18B	P0CX56	146 aa	Predicted RBP	5.64	□□□□□ -1.51
VMA3	YEL027W	MATALPHA1	P0CY06	175 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	HMLALPHA1	P0CY07	175 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	HOM6	P31116	359 aa	Known RBP	5.64	□□□□□ -1.51
VMA3	YEL027W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
VMA3	YEL027W	YHL037C	P38733	133 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	YHK8	P38776	514 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	GPP1	P41277	250 aa	Known RBP	5.64	□□□□□ -1.51
VMA3	YEL027W	BNA6	P43619	295 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	LYS20	P48570	428 aa	Known RBP	5.64	□□□□□ -1.51
VMA3	YEL027W	NIT3	P49954	291 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	CWC23	P52868	283 aa	Predicted RBP	5.64	□□□□□ -1.51
VMA3	YEL027W	RSM23	Q01163	450 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	RPL6A	Q02326	176 aa	Known RBP	5.64	□□□□□ -1.51
VMA3	YEL027W	RCE1	Q03530	315 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	YPR196W	Q06595	470 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	MRPL35	Q06678	367 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	SSK1	Q07084	712 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	LYS21	Q12122	440 aa	Known RBP	5.64	□□□□□ -1.51
VMA3	YEL027W	NCE102	Q12207	173 aa	RIP-Chip data	5.64	□□□□□ -1.51	not detected
VMA3	YEL027W	MCT1	Q12283	360 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	IZH2	Q12442	317 aa		5.64	□□□□□ -1.51
VMA3	YEL027W	ADK1	P07170	222 aa	Known RBP	5.63	□□□□□ -1.51
VMA3	YEL027W	DBP2	P24783	546 aa	Known RBP	5.63	□□□□□ -1.51
VMA3	YEL027W	ERG24	P32462	438 aa	Known RBP	5.63	□□□□□ -1.51
VMA3	YEL027W	UTP30	P36144	274 aa	Known RBP	5.63	□□□□□ -1.51
VMA3	YEL027W	YBR242W	P38331	238 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	SSH1	P38353	490 aa	Known RBP	5.63	□□□□□ -1.51
VMA3	YEL027W	IPI1	P38803	334 aa	Predicted RBP	5.63	□□□□□ -1.51
VMA3	YEL027W	AVT7	P40501	490 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	IRC18	P47056	224 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	MRH4	P53166	561 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	POP6	P53218	158 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	TNA1	P53322	534 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	INN1	P53901	409 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	AAH1	P53909	347 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	NRK1	P53915	240 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	YMR130W	Q04223	302 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	API2	Q04413	109 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	RGC1	Q06108	1083 aa	Known RBP	5.63	□□□□□ -1.51
VMA3	YEL027W	MRL1	Q06815	381 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	THI72	Q08579	599 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	RTN2	Q12443	393 aa		5.63	□□□□□ -1.51
VMA3	YEL027W	MES1	P00958	751 aa	Known RBP	5.62	□□□□□ -1.51
VMA3	YEL027W	RPL35A	P0CX84	120 aa	Known RBP	5.62	□□□□□ -1.51
VMA3	YEL027W	RPL35B	P0CX85	120 aa	Known RBP	5.62	□□□□□ -1.51
VMA3	YEL027W	PDA1	P16387	420 aa	Known RBP	5.62	□□□□□ -1.51
VMA3	YEL027W	PCL1	P24867	279 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	ERG4	P25340	473 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	RPS0A	P32905	252 aa	Known RBP	5.62	□□□□□ -1.51
VMA3	YEL027W	SNC2	P33328	115 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	MKS1	P34072	584 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	TAT1	P38085	619 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	PRS3	P38689	320 aa	Known RBP	5.62	□□□□□ -1.51
VMA3	YEL027W	MIT1	P40002	666 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	YFL051C	P43552	160 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	ERJ5	P43613	295 aa	Predicted RBP	5.62	□□□□□ -1.51
VMA3	YEL027W	DIE2	P50076	525 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	YIP4	P53093	235 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	ERV29	P53337	310 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	YPL199C	Q08954	240 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	ATG41	Q12048	136 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	YOR097C	Q12274	175 aa	Predicted RBP	5.62	□□□□□ -1.51
VMA3	YEL027W	ORT1	Q12375	292 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	ISA2	Q12425	185 aa		5.62	□□□□□ -1.51
VMA3	YEL027W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
VMA3	YEL027W	GPM1	P00950	247 aa	Known RBP	5.61	□□□□□ -1.51
VMA3	YEL027W	PHO4	P07270	312 aa	Known RBP	5.61	□□□□□ -1.51
VMA3	YEL027W	CNE1	P27825	502 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	SPT14	P32363	452 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	MRPS5	P33759	307 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	MSS4	P38994	779 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	SMB1	P40018	196 aa	Known RBP	5.61	□□□□□ -1.51
VMA3	YEL027W	YER084W	P40057	128 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	QDR1	P40475	563 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	MOB2	P43563	287 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	CTK2	P46962	323 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	YJL016W	P47072	561 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	SCW4	P53334	386 aa	Known RBP	5.61	□□□□□ -1.51
VMA3	YEL027W	HHT1	P61830	136 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	HAS1	Q03532	505 aa	Known RBP	5.61	□□□□□ -1.51
VMA3	YEL027W	ASR1	Q06834	288 aa		5.61	□□□□□ -1.51
VMA3	YEL027W	YOR283W	Q12040	230 aa	Known RBP	5.61	□□□□□ -1.51
VMA3	YEL027W	YLR358C	O13565	187 aa		5.6	□□□□□ -1.51
VMA3	YEL027W	DSF1	P0CX08	502 aa		5.6	□□□□□ -1.51
VMA3	YEL027W	YNR073C	P0CX09	502 aa		5.6	□□□□□ -1.51
VMA3	YEL027W	CAP2	P13517	287 aa		5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 79.4 ms