RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	SSK22	P25390	1331 aa	Predicted RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	HIS1	P00498	297 aa	Known RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	ATP6	P00854	259 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	RAD3	P06839	778 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	DBP3	P20447	523 aa	Known RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	DAL82	P21705	255 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	VPS3	P23643	1011 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	DPB2	P24482	689 aa	Predicted RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	CSM1	P25651	190 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	PEX3	P28795	441 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	CAM1	P29547	415 aa	Known RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	SUA5	P32579	426 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	GDH2	P33327	1092 aa	Known RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	CSG2	P35206	410 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	ARN2	P38724	620 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	RCY1	P39531	840 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	DSN1	P40568	576 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	AGP3	P43548	558 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	LIA1	P47120	325 aa	Known RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	TIM21	P53220	239 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	SLX9	P53251	210 aa	Predicted RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	DBP6	P53734	629 aa	Known RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	TRM44	Q02648	567 aa	Known RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	YML108W	Q03759	105 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	ADH6	Q04894	360 aa	Known RBP	0.73	□□□□□ -2.29
SWF1	YDR126W	DPP1	Q05521	289 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	CUR1	Q06469	252 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	APC9	Q12107	265 aa		0.73	□□□□□ -2.29
SWF1	YDR126W	YMR316C-A	I2HB70	103 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	YAL064W-B	O13512	126 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	MET16	P18408	261 aa	Predicted RBP	0.72	□□□□□ -2.29
SWF1	YDR126W	YSR3	P23501	404 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	PPH21	P23594	369 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	GPI12	P23797	304 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	MEK1	P24719	497 aa	Predicted RBP	0.72	□□□□□ -2.29
SWF1	YDR126W	SRB4	P32569	687 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	YUH1	P35127	236 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	YKL070W	P36087	169 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	YKR045C	P36138	183 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	MRPL37	P36532	105 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	FZO1	P38297	855 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	FET3	P38993	636 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	NPT1	P39683	429 aa	Known RBP	0.72	□□□□□ -2.29
SWF1	YDR126W	DDI1	P40087	428 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	SNX4	P47057	423 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	NUP57	P48837	541 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	PNC1	P53184	216 aa	Known RBP	0.72	□□□□□ -2.29
SWF1	YDR126W	CPD1	P53314	239 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	ALG11	P53954	548 aa	Known RBP	0.72	□□□□□ -2.29
SWF1	YDR126W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
SWF1	YDR126W	NUP49	Q02199	472 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	SPP2	Q02521	185 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	RRN5	Q02983	363 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	KRE28	Q04431	385 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	SEC10	Q06245	871 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	CTR3	Q06686	241 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	BTS1	Q12051	335 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	YOR114W	Q12219	294 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	RUD3	Q12234	484 aa	Known RBP	0.72	□□□□□ -2.29
SWF1	YDR126W	SME1	Q12330	94 aa	Predicted RBP	0.72	□□□□□ -2.29
SWF1	YDR126W	SNU23	Q12368	194 aa	Predicted RBP	0.72	□□□□□ -2.29
SWF1	YDR126W	MRPL23	Q12487	163 aa	Predicted RBP	0.72	□□□□□ -2.29
SWF1	YDR126W	YOS9	Q99220	542 aa		0.72	□□□□□ -2.29
SWF1	YDR126W	RPL4A	P10664	362 aa	Known RBP	0.71	□□□□□ -2.3
SWF1	YDR126W	POX1	P13711	748 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	RSR1	P13856	272 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	FRS2	P15625	503 aa	Known RBP	0.71	□□□□□ -2.3
SWF1	YDR126W	RNA15	P25299	296 aa	Predicted RBP	0.71	□□□□□ -2.3
SWF1	YDR126W	RIB7	P33312	244 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	HSM3	P38348	480 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	TCD1	P38756	429 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	TEM1	P38987	245 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	YHB1	P39676	399 aa	Known RBP	0.71	□□□□□ -2.3
SWF1	YDR126W	FMC1	P40491	155 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	GCN20	P43535	752 aa	Known RBP	0.71	□□□□□ -2.3
SWF1	YDR126W	CIS3	P47001	227 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	YJR012C	P47087	207 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	RPL4B	P49626	362 aa	Known RBP	0.71	□□□□□ -2.3
SWF1	YDR126W	NUP84	P52891	726 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	VPS60	Q03390	229 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	YDR209C	Q03480	137 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	KAP95	Q06142	861 aa	Known RBP	0.71	□□□□□ -2.3
SWF1	YDR126W	YLR173W	Q06247	608 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	ATG17	Q06410	417 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	CSM4	Q08955	156 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	POM33	Q12164	279 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	SNF8	Q12483	233 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	FMP16	Q12497	93 aa		0.71	□□□□□ -2.3
SWF1	YDR126W	UBR2	Q07963	1872 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	PET494	P07390	489 aa	Predicted RBP	0.7	□□□□□ -2.3
SWF1	YDR126W	CCA1	P21269	546 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	CWP1	P28319	239 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	NTG1	P31378	399 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	SSO1	P32867	290 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	SPT4	P32914	102 aa	Predicted RBP	0.7	□□□□□ -2.3
SWF1	YDR126W	MRPL39	P36533	70 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	PRS4	P38063	326 aa	Predicted RBP	0.7	□□□□□ -2.3
SWF1	YDR126W	HMT1	P38074	348 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	MRX3	P38172	270 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	SSH1	P38353	490 aa	Known RBP	0.7	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms