RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	YAL064W-B	O13512	126 aa		6.28	□□□□□ -1.4
CDC7	YDL017W	MSW1	P04803	379 aa		6.28	□□□□□ -1.4
CDC7	YDL017W	SGA1	P08019	549 aa		6.28	□□□□□ -1.4
CDC7	YDL017W	URA6	P15700	204 aa		6.28	□□□□□ -1.4
CDC7	YDL017W	DBP2	P24783	546 aa	Known RBP	6.28	□□□□□ -1.4
CDC7	YDL017W	CAM1	P29547	415 aa	Known RBP	6.28	□□□□□ -1.4
CDC7	YDL017W	MCM10	P32354	571 aa		6.28	□□□□□ -1.4
CDC7	YDL017W	FRM2	P37261	193 aa		6.28	□□□□□ -1.4
CDC7	YDL017W	ERJ5	P43613	295 aa	Predicted RBP	6.28	□□□□□ -1.4
CDC7	YDL017W	LSM1	P47017	172 aa	Known RBP	6.28	□□□□□ -1.4
CDC7	YDL017W	GTF1	P53260	183 aa	Predicted RBP	6.28	□□□□□ -1.4
CDC7	YDL017W	GIM3	P53900	129 aa		6.28	□□□□□ -1.4
CDC7	YDL017W	ARG5,6	Q01217	863 aa		6.28	□□□□□ -1.4
CDC7	YDL017W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
CDC7	YDL017W	GRE1	Q08969	168 aa		6.28	□□□□□ -1.4
CDC7	YDL017W	HFA1	P32874	2273 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	SCEI	P03882	235 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	PHO2	P07269	559 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	HXT2	P23585	541 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	YCR061W	P25639	631 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	MTC7	P32633	139 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	COS9	P36034	407 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	PUG1	P40100	303 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	SWM2	P40342	146 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	DUG1	P43616	481 aa	Known RBP	6.27	□□□□□ -1.41
CDC7	YDL017W	LOH1	P47055	219 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	PGU1	P47180	361 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	NIT3	P49954	291 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	JAC1	P53193	184 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	SLI1	P53304	468 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	AAH1	P53909	347 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	TIM11	P81449	96 aa	Predicted RBP	6.27	□□□□□ -1.41
CDC7	YDL017W	ATG21	Q02887	496 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	YPL039W	Q03080	316 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	CGI121	Q03705	181 aa	Known RBP	6.27	□□□□□ -1.41
CDC7	YDL017W	TRS23	Q03784	219 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	GIS1	Q03833	894 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	VBA4	Q04602	768 aa	Known RBP	6.27	□□□□□ -1.41
CDC7	YDL017W	CTS2	Q06350	511 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	YOR376W	Q08900	122 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	FEX1	Q08913	375 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	NIP7	Q08962	181 aa	Known RBP	6.27	□□□□□ -1.41
CDC7	YDL017W	YRM1	Q12340	786 aa		6.27	□□□□□ -1.41
CDC7	YDL017W	YHR214C-D	P0CX93	97 aa		6.26	□□□□□ -1.41
CDC7	YDL017W	HNM1	P19807	563 aa		6.26	□□□□□ -1.41
CDC7	YDL017W	ADH7	P25377	361 aa		6.26	□□□□□ -1.41
CDC7	YDL017W	UMP1	P38293	148 aa		6.26	□□□□□ -1.41
CDC7	YDL017W	QDR1	P40475	563 aa		6.26	□□□□□ -1.41
CDC7	YDL017W	CIN2	P46670	268 aa		6.26	□□□□□ -1.41
CDC7	YDL017W	NIT2	P47016	307 aa		6.26	□□□□□ -1.41
CDC7	YDL017W	OCA1	P50946	238 aa	Predicted RBP	6.26	□□□□□ -1.41
CDC7	YDL017W	PDR16	P53860	351 aa	Known RBP	6.26	□□□□□ -1.41
CDC7	YDL017W	ISU1	Q03020	165 aa		6.26	□□□□□ -1.41
CDC7	YDL017W	YHR214C-E	Q8TGK0	99 aa		6.26	□□□□□ -1.41
CDC7	YDL017W	AAC1	P04710	309 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	CDC34	P14682	295 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	DAL82	P21705	255 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	MAG1	P22134	296 aa	Known RBP	6.25	□□□□□ -1.41
CDC7	YDL017W	CPR4	P25334	318 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	ARO4	P32449	370 aa	Known RBP	6.25	□□□□□ -1.41
CDC7	YDL017W	SUA5	P32579	426 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	FMT1	P32785	401 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	NAT2	P37293	288 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	ARO9	P38840	513 aa	Predicted RBP	6.25	□□□□□ -1.41
CDC7	YDL017W	SHO1	P40073	367 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	SLZ1	P40167	298 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	LYS5	P50113	272 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	UBC12	P52491	188 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	OKP1	P53298	406 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	BSC5	P53755	489 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	SMX3	P54999	86 aa	Predicted RBP	6.25	□□□□□ -1.41
CDC7	YDL017W	YMR265C	Q03508	461 aa	Known RBP	6.25	□□□□□ -1.41
CDC7	YDL017W	YDR102C	Q03864	110 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	HNT1	Q04344	158 aa	Known RBP	6.25	□□□□□ -1.41
CDC7	YDL017W	AKR2	Q12013	749 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	AEP3	Q12089	606 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	MCT1	Q12283	360 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	ATP14	Q12349	124 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	RRI1	Q12468	440 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	PRM4	Q12498	284 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	BRR2	P32639	2163 aa	Known RBP	6.25	□□□□□ -1.41
CDC7	YDL017W	NUM1	Q00402	2748 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	YBR085C-A	O43137	85 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	PAN3	P36102	679 aa	Predicted RBP	6.25	□□□□□ -1.41
CDC7	YDL017W	PRE3	P38624	215 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
CDC7	YDL017W	YMR144W	P40214	342 aa	Known RBP	6.25	□□□□□ -1.41
CDC7	YDL017W	REE1	P40893	198 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	MSY1	P48527	492 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	SYM1	Q06563	197 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	SRL2	Q12020	392 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	TGS1	Q12052	315 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	YOR032W-A	Q8TGS1	66 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	PET20	Q99373	253 aa		6.25	□□□□□ -1.41
CDC7	YDL017W	SPO7	P18410	259 aa		6.24	□□□□□ -1.41
CDC7	YDL017W	PCL1	P24867	279 aa		6.24	□□□□□ -1.41
CDC7	YDL017W	VMA5	P31412	392 aa	Known RBP	6.24	□□□□□ -1.41
CDC7	YDL017W	OM14	P38325	134 aa		6.24	□□□□□ -1.41
CDC7	YDL017W	IDP2	P41939	412 aa		6.24	□□□□□ -1.41
CDC7	YDL017W	TAD2	P47058	250 aa		6.24	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 109.5 ms