RNA–Protein interactions for RNA: YBR012W-A

YBR012W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBR012W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR012W-AYBR012W-A MRPS28P21771 286 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A MRPL25P23369 157 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A DAL80P26343 269 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A CAM1P29547 415 aaKnown RBP1.33□□□□□ -2.2
YBR012W-AYBR012W-A BMH2P34730 273 aaKnown RBP1.33□□□□□ -2.2
YBR012W-AYBR012W-A HSM3P38348 480 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A LOC1P43586 204 aaPredicted RBP1.33□□□□□ -2.2
YBR012W-AYBR012W-A GON7P46984 123 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A BAT2P47176 376 aaKnown RBP1.33□□□□□ -2.2
YBR012W-AYBR012W-A VMA10P48836 114 aaKnown RBP1.33□□□□□ -2.2
YBR012W-AYBR012W-A CGR1P53188 120 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A FYV6P53913 173 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A ARP5P53946 755 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A SLM2P53955 656 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A SDC1Q03323 175 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A VBA1Q04301 562 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A RNH1Q04740 348 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A SSQ1Q05931 657 aaPredicted RBP1.33□□□□□ -2.2
YBR012W-AYBR012W-A ARV1Q06541 321 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A YLR413WQ06689 675 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A YOR268CQ08734 132 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A RIO1Q12196 484 aaKnown RBP1.33□□□□□ -2.2
YBR012W-AYBR012W-A SWI1P09547 1314 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A IKI3Q06706 1349 aaKnown RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A RPP0P05317 312 aaKnown RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A DPM1P14020 267 aaKnown RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A VPS3P23643 1011 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A SEC14P24280 304 aaKnown RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A CDC10P25342 322 aaKnown RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A RPC19P28000 142 aaKnown RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A NTG1P31378 399 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A CLB6P32943 380 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A CPR5P35176 225 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A OPY1P38271 328 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A SIP3P38717 1229 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A RCY1P39531 840 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A DAN1P47178 298 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A NIF3P53081 288 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A GIM3P53900 129 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A EGD1Q02642 157 aaKnown RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A YML108WQ03759 105 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A ARO80Q04052 950 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A SMD2Q06217 110 aaKnown RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A BCP1Q06338 283 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A TY3A-GQ12173 290 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A RRP36Q12481 300 aaPredicted RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A TY3A-IQ99219 290 aa1.32□□□□□ -2.2
YBR012W-AYBR012W-A TOP2P06786 1428 aaKnown RBP1.32□□□□□ -2.2
YBR012W-AYBR012W-A COS2P0CX12 379 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A COS3P0CX13 379 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A MER1P16523 270 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A DBP3P20447 523 aaKnown RBP1.31□□□□□ -2.2
YBR012W-AYBR012W-A YCR016WP25617 290 aaKnown RBP1.31□□□□□ -2.2
YBR012W-AYBR012W-A BMH1P29311 267 aaKnown RBP1.31□□□□□ -2.2
YBR012W-AYBR012W-A MEI4P29467 408 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A UBC6P33296 250 aaPredicted RBP1.31□□□□□ -2.2
YBR012W-AYBR012W-A YKL070WP36087 169 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A YER034WP40022 185 aaKnown RBP1.31□□□□□ -2.2
YBR012W-AYBR012W-A MEP1P40260 492 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A FMP33P46998 180 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A ALB1P47019 175 aaPredicted RBP1.31□□□□□ -2.2
YBR012W-AYBR012W-A ILM1P47155 203 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A RAD17P48581 401 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A NUP84P52891 726 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A LAP3Q01532 483 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
YBR012W-AYBR012W-A PLP1Q04004 230 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A RRP17Q04031 235 aaPredicted RBP1.31□□□□□ -2.2
YBR012W-AYBR012W-A KRE28Q04431 385 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A MYO5Q04439 1219 aaKnown RBP1.31□□□□□ -2.2
YBR012W-AYBR012W-A MMS1Q06211 1407 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A SEC10Q06245 871 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A ATG17Q06410 417 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A FMP16Q12497 93 aa1.31□□□□□ -2.2
YBR012W-AYBR012W-A SSK22P25390 1331 aaPredicted RBP1.31□□□□□ -2.2
YBR012W-AYBR012W-A CFT1Q06632 1357 aaKnown RBP1.3□□□□□ -2.2
YBR012W-AYBR012W-A YAL064W-BO13512 126 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A RPL26AP05743 127 aaKnown RBP1.3□□□□□ -2.2
YBR012W-AYBR012W-A RPL4AP10664 362 aaKnown RBP1.3□□□□□ -2.2
YBR012W-AYBR012W-A NMT1P14743 455 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A DPB2P24482 689 aaPredicted RBP1.3□□□□□ -2.2
YBR012W-AYBR012W-A SRB4P32569 687 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A ECM4P36156 370 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A FES1P38260 290 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A POP7P38291 140 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A YBR242WP38331 238 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A YHL049CP38722 271 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A YJL028WP47062 111 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A APS3P47064 194 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A HAM1P47119 197 aaKnown RBP1.3□□□□□ -2.2
YBR012W-AYBR012W-A RPL4BP49626 362 aaKnown RBP1.3□□□□□ -2.2
YBR012W-AYBR012W-A MDM34P53083 459 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A MND1P53102 219 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A RPL26BP53221 127 aaKnown RBP1.3□□□□□ -2.2
YBR012W-AYBR012W-A RTC4P53850 401 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A RRN5Q02983 363 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A SPC2Q04969 178 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A SPO77Q06134 477 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A YPD1Q07688 167 aa1.3□□□□□ -2.2
YBR012W-AYBR012W-A BRX1Q08235 291 aaKnown RBP1.3□□□□□ -2.2
YBR012W-AYBR012W-A YPL225WQ08971 146 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms