RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeastyeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAL004WYAL004W CDC13P32797 924 aaKnown RBP3.25□□□□□ -1.89
YAL004WYAL004W MRPL6P32904 214 aa3.25□□□□□ -1.89
YAL004WYAL004W ATO2P32907 282 aa3.25□□□□□ -1.89
YAL004WYAL004W NUF2P33895 451 aa3.25□□□□□ -1.89
YAL004WYAL004W ECM15P35195 104 aa3.25□□□□□ -1.89
YAL004WYAL004W YKL063CP35725 167 aa3.25□□□□□ -1.89
YAL004WYAL004W YBR285WP38354 144 aa3.25□□□□□ -1.89
YAL004WYAL004W EFM1P38732 585 aa3.25□□□□□ -1.89
YAL004WYAL004W NPT1P39683 429 aaKnown RBP3.25□□□□□ -1.89
YAL004WYAL004W ICE2P40499 491 aa3.25□□□□□ -1.89
YAL004WYAL004W YKE4P40544 346 aa3.25□□□□□ -1.89
YAL004WYAL004W RPL10P41805 221 aaKnown RBP3.25□□□□□ -1.89
YAL004WYAL004W COS4P43542 379 aa3.25□□□□□ -1.89
YAL004WYAL004W AIM23P47015 356 aa3.25□□□□□ -1.89
YAL004WYAL004W ADO1P47143 340 aaKnown RBP3.25□□□□□ -1.89
YAL004WYAL004W FLC3P53121 802 aa3.25□□□□□ -1.89
YAL004WYAL004W YGL117WP53133 265 aa3.25□□□□□ -1.89
YAL004WYAL004W ASI1P54074 624 aa3.25□□□□□ -1.89
YAL004WYAL004W MSS11Q03825 758 aa3.25□□□□□ -1.89
YAL004WYAL004W TRM12Q04235 462 aa3.25□□□□□ -1.89
YAL004WYAL004W YMR034CQ05131 434 aaPredicted RBP3.25□□□□□ -1.89
YAL004WYAL004W SSK1Q07084 712 aa3.25□□□□□ -1.89
YAL004WYAL004W MFG1Q07684 458 aa3.25□□□□□ -1.89
YAL004WYAL004W SGT1Q08446 395 aa3.25□□□□□ -1.89
YAL004WYAL004W SKI7Q08491 747 aaPredicted RBP3.25□□□□□ -1.89
YAL004WYAL004W TMS1Q12116 473 aa3.25□□□□□ -1.89
YAL004WYAL004W YOR342CQ12182 319 aa3.25□□□□□ -1.89
YAL004WYAL004W TPT1Q12272 230 aaKnown RBP3.25□□□□□ -1.89
YAL004WYAL004W JLP1Q12358 412 aa3.25□□□□□ -1.89
YAL004WYAL004W YPR096CO13587 100 aa3.24□□□□□ -1.89
YAL004WYAL004W RPL28P02406 149 aaKnown RBP3.24□□□□□ -1.89
YAL004WYAL004W YAR066WP0CX18 203 aa3.24□□□□□ -1.89
YAL004WYAL004W YHR214WP0CX19 203 aa3.24□□□□□ -1.89
YAL004WYAL004W NAM2P11325 894 aa3.24□□□□□ -1.89
YAL004WYAL004W FPR1P20081 114 aaKnown RBP3.24□□□□□ -1.89
YAL004WYAL004W CCA1P21269 546 aa3.24□□□□□ -1.89
YAL004WYAL004W CHA1P25379 360 aaKnown RBP3.24□□□□□ -1.89
YAL004WYAL004W SNC1P31109 117 aa3.24□□□□□ -1.89
YAL004WYAL004W YNK1P36010 153 aaKnown RBP3.24□□□□□ -1.89
YAL004WYAL004W MRPL17P36528 281 aa3.24□□□□□ -1.89
YAL004WYAL004W BMT2P38278 337 aa3.24□□□□□ -1.89
YAL004WYAL004W CUE1P38428 203 aa3.24□□□□□ -1.89
YAL004WYAL004W YHR035WP38769 630 aa3.24□□□□□ -1.89
YAL004WYAL004W LYS1P38998 373 aaRIP-Chip data3.24□□□□□ -1.89not detected
YAL004WYAL004W YER184CP39961 794 aa3.24□□□□□ -1.89
YAL004WYAL004W TES1P41903 349 aaKnown RBP3.24□□□□□ -1.89
YAL004WYAL004W JHD2P47156 728 aaPredicted RBP3.24□□□□□ -1.89
YAL004WYAL004W YJR141WP47172 347 aaPredicted RBP3.24□□□□□ -1.89
YAL004WYAL004W TIS11P47977 285 aa3.24□□□□□ -1.89
YAL004WYAL004W NIF3P53081 288 aa3.24□□□□□ -1.89
YAL004WYAL004W CPR8P53728 308 aa3.24□□□□□ -1.89
YAL004WYAL004W IDP3P53982 420 aaKnown RBP3.24□□□□□ -1.89
YAL004WYAL004W TMA20P89886 181 aaPredicted RBP3.24□□□□□ -1.89
YAL004WYAL004W RHO4Q00246 291 aa3.24□□□□□ -1.89
YAL004WYAL004W SPR6Q01684 191 aa3.24□□□□□ -1.89
YAL004WYAL004W PIR1Q03178 341 aa3.24□□□□□ -1.89
YAL004WYAL004W RIF2Q06208 395 aa3.24□□□□□ -1.89
YAL004WYAL004W CTR3Q06686 241 aa3.24□□□□□ -1.89
YAL004WYAL004W YDL114WQ07530 308 aa3.24□□□□□ -1.89
YAL004WYAL004W MCH4Q08268 501 aa3.24□□□□□ -1.89
YAL004WYAL004W RRP42Q12277 265 aaPredicted RBP3.24□□□□□ -1.89
YAL004WYAL004W RKM5Q12367 367 aa3.24□□□□□ -1.89
YAL004WYAL004W MHT1Q12525 324 aa3.24□□□□□ -1.89
YAL004WYAL004W MEX67Q99257 599 aaKnown RBP3.24□□□□□ -1.89
YAL004WYAL004W TOM1Q03280 3268 aa3.23□□□□□ -1.89
YAL004WYAL004W RPL7AP05737 244 aaKnown RBP3.23□□□□□ -1.89
YAL004WYAL004W PUT1P09368 476 aa3.23□□□□□ -1.89
YAL004WYAL004W RPL31AP0C2H8 113 aaKnown RBP3.23□□□□□ -1.89
YAL004WYAL004W MDM10P18409 493 aa3.23□□□□□ -1.89
YAL004WYAL004W EPT1P22140 391 aa3.23□□□□□ -1.89
YAL004WYAL004W GIT1P25346 518 aa3.23□□□□□ -1.89
YAL004WYAL004W LSB5P25369 354 aa3.23□□□□□ -1.89
YAL004WYAL004W BUB3P26449 341 aa3.23□□□□□ -1.89
YAL004WYAL004W TRR1P29509 319 aaKnown RBP3.23□□□□□ -1.89
YAL004WYAL004W MKK1P32490 508 aa3.23□□□□□ -1.89
YAL004WYAL004W FLO10P36170 1169 aa3.23□□□□□ -1.89
YAL004WYAL004W YCR087C-AP37263 153 aa3.23□□□□□ -1.89
YAL004WYAL004W YCR041WP37265 110 aa3.23□□□□□ -1.89
YAL004WYAL004W DHH1P39517 506 aaKnown RBP3.23□□□□□ -1.89
YAL004WYAL004W PRE6P40303 254 aaKnown RBP3.23□□□□□ -1.89
YAL004WYAL004W PAN6P40459 309 aa3.23□□□□□ -1.89
YAL004WYAL004W PSA1P41940 361 aaKnown RBP3.23□□□□□ -1.89
YAL004WYAL004W KEG1P43614 200 aa3.23□□□□□ -1.89
YAL004WYAL004W YFR057WP43625 151 aa3.23□□□□□ -1.89
YAL004WYAL004W YJR012CP47087 207 aa3.23□□□□□ -1.89
YAL004WYAL004W YIP1P53039 248 aa3.23□□□□□ -1.89
YAL004WYAL004W YGR042WP53227 271 aa3.23□□□□□ -1.89
YAL004WYAL004W GOR1P53839 350 aa3.23□□□□□ -1.89
YAL004WYAL004W IGO1P53897 168 aa3.23□□□□□ -1.89
YAL004WYAL004W SMX3P54999 86 aaPredicted RBP3.23□□□□□ -1.89
YAL004WYAL004W SWP1Q02795 286 aa3.23□□□□□ -1.89
YAL004WYAL004W BET5Q03630 159 aa3.23□□□□□ -1.89
YAL004WYAL004W SEC13Q04491 297 aaKnown RBP3.23□□□□□ -1.89
YAL004WYAL004W FMP42Q04991 504 aa3.23□□□□□ -1.89
YAL004WYAL004W YDL218WQ07629 317 aa3.23□□□□□ -1.89
YAL004WYAL004W YOL131WQ08270 108 aa3.23□□□□□ -1.89
YAL004WYAL004W SRL2Q12020 392 aa3.23□□□□□ -1.89
YAL004WYAL004W RPL7BQ12213 244 aaKnown RBP3.23□□□□□ -1.89
YAL004WYAL004W RGT2Q12300 763 aa3.23□□□□□ -1.89
YAL004WYAL004W WTM1Q12363 437 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 132.5 ms