RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 TOM1L1O75674 476 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 KRT18P05783 430 aaKnown RBP21.96■■□□□ 1.11
TMEM53-205ENST00000372244 KCNC3Q14003 757 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 NAB2Q15742 525 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 DUSP6Q16828 381 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 PLPP4Q5VZY2 271 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 MPZL3Q6UWV2 235 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 ALKAL1Q6UXT8 129 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 DDX12PQ92771 950 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 DNAJC19Q96DA6 116 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 ZBTB45Q96K62 511 aaPredicted RBP21.96■■□□□ 1.11
TMEM53-205ENST00000372244 ZBP1Q9H171 429 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 ENTPD7Q9NQZ7 604 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 PCDHA7Q9UN72 937 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 GDAQ9Y2T3 454 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 MCF2P10911 925 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 GRM5P41594 1212 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 STAT6P42226 847 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 E2F4Q16254 413 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 MARCH5Q9NX47 278 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 TBX20Q9UMR3 447 aa21.96■■□□□ 1.11
TMEM53-205ENST00000372244 H3BQ06 376 aaPredicted RBP21.95■■□□□ 1.1
TMEM53-205ENST00000372244 TBCAO75347 108 aaKnown RBP21.95■■□□□ 1.1
TMEM53-205ENST00000372244 CXCL14O95715 111 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 THP07101 528 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 CTSAP10619 480 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 OR1G1P47890 313 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 GTF2BQ00403 316 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 SMC1AQ14683 1233 aaKnown RBP21.95■■□□□ 1.1
TMEM53-205ENST00000372244 BMS1Q14692 1282 aaKnown RBP21.95■■□□□ 1.1
TMEM53-205ENST00000372244 ZNF568Q3ZCX4 644 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 XKR4Q5GH76 650 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 TMEM184AQ6ZMB5 413 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 DYMQ7RTS9 669 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 PDILTQ8N807 584 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 RPS6KC1Q96S38 1066 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 TCHPQ9BT92 498 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 ST6GALNAC4Q9H4F1 302 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 CLEC1BQ9P126 229 aa21.95■■□□□ 1.1
TMEM53-205ENST00000372244 FSD2A1L4K1 749 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 TBX10O75333 385 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 NR1I2O75469 434 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 GLP2RO95838 553 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 MCL1Q07820 350 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 BECN1Q14457 450 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 PUS10Q3MIT2 529 aaKnown RBP21.94■■□□□ 1.1
TMEM53-205ENST00000372244 EP400NLQ6ZTU2 488 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 ZNF720Q7Z2F6 126 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 ZBTB33Q86T24 672 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 FAM178BQ8IXR5 827 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 RNF168Q8IYW5 571 aaPredicted RBP21.94■■□□□ 1.1
TMEM53-205ENST00000372244 CEP120Q8N960 986 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 VN1R2Q8NFZ6 395 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 ADAMTS19Q8TE59 1207 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 MSLNLQ96KJ4 702 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 COLEC11Q9BWP8 271 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 ZHX3Q9H4I2 956 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 PRG3Q9Y2Y8 225 aaPredicted RBP21.94■■□□□ 1.1
TMEM53-205ENST00000372244 MYH11P35749 1972 aa21.94■■□□□ 1.1
TMEM53-205ENST00000372244 GRXCR2A6NFK2 248 aa21.93■■□□□ 1.1
TMEM53-205ENST00000372244 LILRB3O75022 631 aa21.93■■□□□ 1.1
TMEM53-205ENST00000372244 PIGRP01833 764 aa21.93■■□□□ 1.1
TMEM53-205ENST00000372244 NMT1P30419 496 aaKnown RBP21.93■■□□□ 1.1
TMEM53-205ENST00000372244 ABCD1P33897 745 aa21.93■■□□□ 1.1
TMEM53-205ENST00000372244 TUSC3Q13454 348 aa21.93■■□□□ 1.1
TMEM53-205ENST00000372244 CCDC94Q9BW85 323 aaPredicted RBP21.93■■□□□ 1.1
TMEM53-205ENST00000372244 STRA6Q9BX79 667 aa21.93■■□□□ 1.1
TMEM53-205ENST00000372244 KBTBD4Q9NVX7 518 aa21.93■■□□□ 1.1
TMEM53-205ENST00000372244 SEL1LQ9UBV2 794 aa21.93■■□□□ 1.1
TMEM53-205ENST00000372244 BDP1A6H8Y1 2624 aa21.93■■□□□ 1.1
TMEM53-205ENST00000372244 MYH15Q9Y2K3 1946 aa21.92■■□□□ 1.1
TMEM53-205ENST00000372244 FRMD3A2A2Y4 597 aa21.92■■□□□ 1.1
TMEM53-205ENST00000372244 F8W810 466 aa21.92■■□□□ 1.1
TMEM53-205ENST00000372244 CLDN3O15551 220 aa21.92■■□□□ 1.1
TMEM53-205ENST00000372244 ME1P48163 572 aa21.92■■□□□ 1.1
TMEM53-205ENST00000372244 TAS1R1Q7RTX1 841 aa21.92■■□□□ 1.1
TMEM53-205ENST00000372244 PPP1R10Q96QC0 940 aaKnown RBP21.92■■□□□ 1.1
TMEM53-205ENST00000372244 PAAF1Q9BRP4 392 aa21.92■■□□□ 1.1
TMEM53-205ENST00000372244 HAPLN2Q9GZV7 340 aa21.92■■□□□ 1.1
TMEM53-205ENST00000372244 CUEDC2Q9H467 287 aa21.92■■□□□ 1.1
TMEM53-205ENST00000372244 SMIM28A0A1B0GU29 152 aa21.91■■□□□ 1.1
TMEM53-205ENST00000372244 K7ENM7 598 aa21.91■■□□□ 1.1
TMEM53-205ENST00000372244 MEFVO15553 781 aaPredicted RBP21.91■■□□□ 1.1
TMEM53-205ENST00000372244 SOD2P04179 222 aa21.91■■□□□ 1.1
TMEM53-205ENST00000372244 RBM10P98175 930 aaKnown RBP21.91■■□□□ 1.1
TMEM53-205ENST00000372244 COASYQ13057 564 aa21.91■■□□□ 1.1
TMEM53-205ENST00000372244 NOLC1Q14978 699 aaKnown RBP eCLIP21.91■■□□□ 1.13e-11■□□□□ 9.8
TMEM53-205ENST00000372244 RESP18Q5W5W9 173 aa21.91■■□□□ 1.1
TMEM53-205ENST00000372244 PTCRAQ6ISU1 281 aaPredicted RBP21.91■■□□□ 1.1
TMEM53-205ENST00000372244 IQUBQ8NA54 791 aa21.91■■□□□ 1.1
TMEM53-205ENST00000372244 AUTS2Q8WXX7 1259 aa21.91■■□□□ 1.1
TMEM53-205ENST00000372244 ACAP3Q96P50 834 aa21.91■■□□□ 1.1
TMEM53-205ENST00000372244 TOPORSQ9NS56 1045 aaPredicted RBP21.91■■□□□ 1.1
TMEM53-205ENST00000372244 CLASP2O75122 1294 aaKnown RBP21.9■■□□□ 1.1
TMEM53-205ENST00000372244 GAP43P17677 238 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 NDUFV1P49821 464 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 YARSP54577 528 aaKnown RBP21.9■■□□□ 1.1
TMEM53-205ENST00000372244 OSTNP61366 133 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 PTPN14Q15678 1187 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 ZC2HC1CQ53FD0 456 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms