RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 APE2P32454 952 aaKnown RBP2.76□□□□□ -1.97
snR42snR42 PRP19P32523 503 aaKnown RBP2.76□□□□□ -1.97
snR42snR42 RPC34P32910 317 aa2.76□□□□□ -1.97
snR42snR42 DTR1P38125 572 aa2.76□□□□□ -1.97
snR42snR42 YBR138CP38277 524 aa2.76□□□□□ -1.97
snR42snR42 ECM14P38836 430 aa2.76□□□□□ -1.97
snR42snR42 MLH1P38920 769 aa2.76□□□□□ -1.97
snR42snR42 YER184CP39961 794 aa2.76□□□□□ -1.97
snR42snR42 SIT1P39980 628 aa2.76□□□□□ -1.97
snR42snR42 SPO73P40031 143 aa2.76□□□□□ -1.97
snR42snR42 SWP82P43554 623 aa2.76□□□□□ -1.97
snR42snR42 SSY5P47002 699 aa2.76□□□□□ -1.97
snR42snR42 SFH5P47008 294 aa2.76□□□□□ -1.97
snR42snR42 HMS2P47175 358 aa2.76□□□□□ -1.97
snR42snR42 RMD9P53140 646 aaKnown RBP2.76□□□□□ -1.97
snR42snR42 TEX1P53851 422 aaKnown RBP2.76□□□□□ -1.97
snR42snR42 ASI2P53895 289 aa2.76□□□□□ -1.97
snR42snR42 SKO1Q02100 647 aa2.76□□□□□ -1.97
snR42snR42 SNZ1Q03148 297 aa2.76□□□□□ -1.97
snR42snR42 RSM28Q03430 361 aa2.76□□□□□ -1.97
snR42snR42 BNA7Q04066 261 aa2.76□□□□□ -1.97
snR42snR42 YDR387CQ04162 555 aa2.76□□□□□ -1.97
snR42snR42 MLC2Q06580 163 aa2.76□□□□□ -1.97
snR42snR42 YDL114WQ07530 308 aa2.76□□□□□ -1.97
snR42snR42 LOT6Q07923 191 aa2.76□□□□□ -1.97
snR42snR42 FIT3Q08907 204 aa2.76□□□□□ -1.97
snR42snR42 SRL2Q12020 392 aa2.76□□□□□ -1.97
snR42snR42 MCT1Q12283 360 aa2.76□□□□□ -1.97
snR42snR42 YAK1P14680 807 aa2.75□□□□□ -1.97
snR42snR42 STE18P18852 110 aa2.75□□□□□ -1.97
snR42snR42 RFA1P22336 621 aaKnown RBP2.75□□□□□ -1.97
snR42snR42 STE50P25344 346 aa2.75□□□□□ -1.97
snR42snR42 MRPL6P32904 214 aa2.75□□□□□ -1.97
snR42snR42 CLB6P32943 380 aa2.75□□□□□ -1.97
snR42snR42 YKR015CP36111 568 aa2.75□□□□□ -1.97
snR42snR42 YBR063CP38083 404 aa2.75□□□□□ -1.97
snR42snR42 SIC1P38634 284 aa2.75□□□□□ -1.97
snR42snR42 CHL4P38907 458 aa2.75□□□□□ -1.97
snR42snR42 ALP1P38971 573 aa2.75□□□□□ -1.97
snR42snR42 YIL029CP40538 142 aa2.75□□□□□ -1.97
snR42snR42 YIL012WP40551 113 aa2.75□□□□□ -1.97
snR42snR42 TIR3P40552 269 aa2.75□□□□□ -1.97
snR42snR42 PFS2P42841 465 aaKnown RBP2.75□□□□□ -1.97
snR42snR42 STB1P42845 420 aa2.75□□□□□ -1.97
snR42snR42 IRC5P43610 853 aa2.75□□□□□ -1.97
snR42snR42 YJL016WP47072 561 aa2.75□□□□□ -1.97
snR42snR42 VOA1P53262 265 aa2.75□□□□□ -1.97
snR42snR42 MTM1P53320 366 aa2.75□□□□□ -1.97
snR42snR42 LAP3Q01532 483 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
snR42snR42 DIG2Q03373 323 aaKnown RBP2.75□□□□□ -1.97
snR42snR42 YDR239CQ03780 787 aa2.75□□□□□ -1.97
snR42snR42 TAZ1Q06510 381 aa2.75□□□□□ -1.97
snR42snR42 SYC1Q08553 188 aaPredicted RBP2.75□□□□□ -1.97
snR42snR42 YOR378WQ08902 515 aa2.75□□□□□ -1.97
snR42snR42 IZH2Q12442 317 aa2.75□□□□□ -1.97
snR42snR42 RRI1Q12468 440 aa2.75□□□□□ -1.97
snR42snR42 Q0297Q9ZZV8 51 aa2.75□□□□□ -1.97
snR42snR42 UTP20P35194 2493 aaKnown RBP2.74□□□□□ -1.97
snR42snR42 TPK3P05986 398 aa2.74□□□□□ -1.97
snR42snR42 KIN28P06242 306 aa2.74□□□□□ -1.97
snR42snR42 RPS23AP0CX29 145 aaKnown RBP2.74□□□□□ -1.97
snR42snR42 RPS23BP0CX30 145 aa2.74□□□□□ -1.97
snR42snR42 MEK1P24719 497 aaPredicted RBP2.74□□□□□ -1.97
snR42snR42 BOS1P25385 244 aa2.74□□□□□ -1.97
snR42snR42 DAL80P26343 269 aa2.74□□□□□ -1.97
snR42snR42 PTP2P29461 750 aa2.74□□□□□ -1.97
snR42snR42 AFR1P33304 620 aa2.74□□□□□ -1.97
snR42snR42 SRP102P36057 244 aaPredicted RBP2.74□□□□□ -1.97
snR42snR42 APL3P38065 1025 aa2.74□□□□□ -1.97
snR42snR42 SLM4P38247 162 aa2.74□□□□□ -1.97
snR42snR42 YBR096WP38256 230 aa2.74□□□□□ -1.97
snR42snR42 ARO9P38840 513 aaPredicted RBP2.74□□□□□ -1.97
snR42snR42 RRG9P40156 214 aa2.74□□□□□ -1.97
snR42snR42 EGT2P42835 1041 aa2.74□□□□□ -1.97
snR42snR42 AGP3P43548 558 aa2.74□□□□□ -1.97
snR42snR42 RET2P43621 546 aa2.74□□□□□ -1.97
snR42snR42 FMP33P46998 180 aa2.74□□□□□ -1.97
snR42snR42 COS10P52924 374 aa2.74□□□□□ -1.97
snR42snR42 PXR1P53335 271 aaPredicted RBP2.74□□□□□ -1.97
snR42snR42 MNT4P53745 580 aa2.74□□□□□ -1.97
snR42snR42 PGA1P53896 198 aa2.74□□□□□ -1.97
snR42snR42 ASI3P53983 676 aa2.74□□□□□ -1.97
snR42snR42 MOT3P54785 490 aaKnown RBP2.74□□□□□ -1.97
snR42snR42 SED1Q01589 338 aa2.74□□□□□ -1.97
snR42snR42 NUP49Q02199 472 aa2.74□□□□□ -1.97
snR42snR42 NRG1Q03125 231 aa2.74□□□□□ -1.97
snR42snR42 YMD8Q03697 442 aa2.74□□□□□ -1.97
snR42snR42 FIN1Q03898 291 aa2.74□□□□□ -1.97
snR42snR42 GPI17Q04080 534 aa2.74□□□□□ -1.97
snR42snR42 YMR315WQ04869 349 aaKnown RBP2.74□□□□□ -1.97
snR42snR42 MRPL51Q06090 140 aaPredicted RBP2.74□□□□□ -1.97
snR42snR42 YTH1Q06102 208 aaPredicted RBP2.74□□□□□ -1.97
snR42snR42 PCL9Q12477 304 aa2.74□□□□□ -1.97
snR42snR42 RIB3Q99258 208 aa2.74□□□□□ -1.97
snR42snR42 BPH1P25356 2167 aa2.73□□□□□ -1.97
snR42snR42 OPI3P05375 206 aa2.73□□□□□ -1.97
snR42snR42 PDE2P06776 526 aa2.73□□□□□ -1.97
snR42snR42 DSF1P0CX08 502 aa2.73□□□□□ -1.97
snR42snR42 YNR073CP0CX09 502 aa2.73□□□□□ -1.97
snR42snR42 PHO80P20052 293 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms