RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C ITR1P30605 584 aa7.37□□□□□ -1.23
SRP54YPR088C ERG24P32462 438 aaKnown RBP7.37□□□□□ -1.23
SRP54YPR088C RPS26AP39938 119 aaKnown RBP7.37□□□□□ -1.23
SRP54YPR088C RPS26BP39939 119 aaKnown RBP7.37□□□□□ -1.23
SRP54YPR088C PHB1P40961 287 aa7.37□□□□□ -1.23
SRP54YPR088C NUP42P49686 430 aaKnown RBP7.37□□□□□ -1.23
SRP54YPR088C TPN1P53099 579 aa7.37□□□□□ -1.23
SRP54YPR088C YLR152CP54072 576 aa7.37□□□□□ -1.23
SRP54YPR088C YMR130WQ04223 302 aa7.37□□□□□ -1.23
SRP54YPR088C RTC5Q12108 567 aaKnown RBP7.37□□□□□ -1.23
SRP54YPR088C RRI1Q12468 440 aa7.37□□□□□ -1.23
SRP54YPR088C TEL1P38110 2787 aa7.36□□□□□ -1.23
SRP54YPR088C RPL7AP05737 244 aaKnown RBP7.36□□□□□ -1.23
SRP54YPR088C PRE4P30657 266 aa7.36□□□□□ -1.23
SRP54YPR088C MGE1P38523 228 aa7.36□□□□□ -1.23
SRP54YPR088C DPB11P47027 764 aaPredicted RBP7.36□□□□□ -1.23
SRP54YPR088C SAM50P53969 484 aa7.36□□□□□ -1.23
SRP54YPR088C PEX30Q06169 523 aa7.36□□□□□ -1.23
SRP54YPR088C RPL7BQ12213 244 aaKnown RBP7.36□□□□□ -1.23
SRP54YPR088C TOR1P35169 2470 aa7.35□□□□□ -1.23
SRP54YPR088C CYC1P00044 109 aaPredicted RBP7.35□□□□□ -1.23
SRP54YPR088C MATALPHA1P0CY06 175 aa7.35□□□□□ -1.23
SRP54YPR088C HMLALPHA1P0CY07 175 aa7.35□□□□□ -1.23
SRP54YPR088C ERG4P25340 473 aa7.35□□□□□ -1.23
SRP54YPR088C ERG9P29704 444 aa7.35□□□□□ -1.23
SRP54YPR088C KRE6P32486 720 aa7.35□□□□□ -1.23
SRP54YPR088C HPA3P39979 161 aa7.35□□□□□ -1.23
SRP54YPR088C YEL057CP39983 233 aa7.35□□□□□ -1.23
SRP54YPR088C TIR3P40552 269 aa7.35□□□□□ -1.23
SRP54YPR088C AAD14P42884 376 aa7.35□□□□□ -1.23
SRP54YPR088C ADO1P47143 340 aaKnown RBP7.35□□□□□ -1.23
SRP54YPR088C MSE1P48525 536 aa7.35□□□□□ -1.23
SRP54YPR088C PCP1P53259 346 aa7.35□□□□□ -1.23
SRP54YPR088C SOK2P53438 785 aaPredicted RBP7.35□□□□□ -1.23
SRP54YPR088C SUR7P54003 302 aa7.35□□□□□ -1.23
SRP54YPR088C HRI1Q05905 244 aaKnown RBP7.35□□□□□ -1.23
SRP54YPR088C ASR1Q06834 288 aa7.35□□□□□ -1.23
SRP54YPR088C PHO4P07270 312 aaKnown RBP7.34□□□□□ -1.23
SRP54YPR088C PDA1P16387 420 aaKnown RBP7.34□□□□□ -1.23
SRP54YPR088C ADH7P25377 361 aa7.34□□□□□ -1.23
SRP54YPR088C CNE1P27825 502 aa7.34□□□□□ -1.23
SRP54YPR088C RCN1P36054 211 aa7.34□□□□□ -1.23
SRP54YPR088C FRM2P37261 193 aa7.34□□□□□ -1.23
SRP54YPR088C HTD2P38790 280 aaKnown RBP7.34□□□□□ -1.23
SRP54YPR088C DLS1P40366 167 aa7.34□□□□□ -1.23
SRP54YPR088C GAS2Q06135 555 aa7.34□□□□□ -1.23
SRP54YPR088C PHO92Q06390 306 aa7.34□□□□□ -1.23
SRP54YPR088C TMS1Q12116 473 aa7.34□□□□□ -1.23
SRP54YPR088C SEC16P48415 2195 aaKnown RBP7.34□□□□□ -1.23
SRP54YPR088C MKS1P34072 584 aa7.34□□□□□ -1.24
SRP54YPR088C SMB1P40018 196 aaKnown RBP7.34□□□□□ -1.24
SRP54YPR088C PUG1P40100 303 aa7.34□□□□□ -1.24
SRP54YPR088C LOH1P47055 219 aa7.34□□□□□ -1.24
SRP54YPR088C YIP4P53093 235 aa7.34□□□□□ -1.24
SRP54YPR088C SLI1P53304 468 aa7.34□□□□□ -1.24
SRP54YPR088C MRPL19P53875 158 aa7.34□□□□□ -1.24
SRP54YPR088C YNL165WP53891 406 aa7.34□□□□□ -1.24
SRP54YPR088C LSM7P53905 115 aaKnown RBP7.34□□□□□ -1.24
SRP54YPR088C COQ11Q05892 277 aa7.34□□□□□ -1.24
SRP54YPR088C ORT1Q12375 292 aa7.34□□□□□ -1.24
SRP54YPR088C GCN1P33892 2672 aaKnown RBP7.33□□□□□ -1.24
SRP54YPR088C GPM1P00950 247 aaKnown RBP7.33□□□□□ -1.24
SRP54YPR088C PRB1P09232 635 aa7.33□□□□□ -1.24
SRP54YPR088C PET54P10834 293 aa7.33□□□□□ -1.24
SRP54YPR088C BUD23P25627 275 aaPredicted RBP7.33□□□□□ -1.24
SRP54YPR088C HYM1P32464 399 aa7.33□□□□□ -1.24
SRP54YPR088C MRPL39P36533 70 aa7.33□□□□□ -1.24
SRP54YPR088C YKE4P40544 346 aa7.33□□□□□ -1.24
SRP54YPR088C POP6P53218 158 aa7.33□□□□□ -1.24
SRP54YPR088C PXR1P53335 271 aaPredicted RBP7.33□□□□□ -1.24
SRP54YPR088C TGS1Q12052 315 aa7.33□□□□□ -1.24
SRP54YPR088C INP53Q12271 1107 aa7.33□□□□□ -1.24
SRP54YPR088C YDL180WQ12301 547 aa7.33□□□□□ -1.24
SRP54YPR088C RPS16AP0CX51 143 aaKnown RBP7.32□□□□□ -1.24
SRP54YPR088C RPS16BP0CX52 143 aaKnown RBP7.32□□□□□ -1.24
SRP54YPR088C NAM2P11325 894 aa7.32□□□□□ -1.24
SRP54YPR088C SNC2P33328 115 aa7.32□□□□□ -1.24
SRP54YPR088C YBR096WP38256 230 aa7.32□□□□□ -1.24
SRP54YPR088C SSH1P38353 490 aaKnown RBP7.32□□□□□ -1.24
SRP54YPR088C RPN14P53196 417 aa7.32□□□□□ -1.24
SRP54YPR088C YNR040WP53736 256 aa7.32□□□□□ -1.24
SRP54YPR088C AAH1P53909 347 aa7.32□□□□□ -1.24
SRP54YPR088C DIG2Q03373 323 aaKnown RBP7.32□□□□□ -1.24
SRP54YPR088C YDR387CQ04162 555 aa7.32□□□□□ -1.24
SRP54YPR088C KEI1Q06346 221 aa7.32□□□□□ -1.24
SRP54YPR088C FRE3Q08905 711 aa7.32□□□□□ -1.24
SRP54YPR088C SED4P25365 1065 aa7.31□□□□□ -1.24
SRP54YPR088C SYS1P41544 203 aa7.31□□□□□ -1.24
SRP54YPR088C ERJ5P43613 295 aaPredicted RBP7.31□□□□□ -1.24
SRP54YPR088C HSV2P50079 448 aaPredicted RBP7.31□□□□□ -1.24
SRP54YPR088C YGL260WP53056 76 aa7.31□□□□□ -1.24
SRP54YPR088C VHT1P53241 593 aa7.31□□□□□ -1.24
SRP54YPR088C SCW4P53334 386 aaKnown RBP7.31□□□□□ -1.24
SRP54YPR088C NRK1P53915 240 aa7.31□□□□□ -1.24
SRP54YPR088C MRP51Q02950 344 aa7.31□□□□□ -1.24
SRP54YPR088C HEM25Q07534 307 aa7.31□□□□□ -1.24
SRP54YPR088C CDC36P06100 191 aaPredicted RBP7.3□□□□□ -1.24
SRP54YPR088C PCL1P24867 279 aa7.3□□□□□ -1.24
SRP54YPR088C PUP1P25043 261 aa7.3□□□□□ -1.24
SRP54YPR088C SCY1P53009 804 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms