RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W PHO2P07269 559 aa7.51□□□□□ -1.21
AMF1YOR378W RPS18AP0CX55 146 aaKnown RBP7.51□□□□□ -1.21
AMF1YOR378W RPS18BP0CX56 146 aaPredicted RBP7.51□□□□□ -1.21
AMF1YOR378W PTC6P25646 442 aa7.51□□□□□ -1.21
AMF1YOR378W HOM6P31116 359 aaKnown RBP7.51□□□□□ -1.21
AMF1YOR378W IPI1P38803 334 aaPredicted RBP7.51□□□□□ -1.21
AMF1YOR378W TIR3P40552 269 aa7.51□□□□□ -1.21
AMF1YOR378W AAD14P42884 376 aa7.51□□□□□ -1.21
AMF1YOR378W YJR120WP47157 116 aa7.51□□□□□ -1.21
AMF1YOR378W YLR152CP54072 576 aa7.51□□□□□ -1.21
AMF1YOR378W RGC1Q06108 1083 aaKnown RBP7.51□□□□□ -1.21
AMF1YOR378W YLR352WQ06479 807 aa7.51□□□□□ -1.21
AMF1YOR378W MRPL35Q06678 367 aa7.51□□□□□ -1.21
AMF1YOR378W YPL272CQ08984 517 aa7.51□□□□□ -1.21
AMF1YOR378W RTN2Q12443 393 aa7.51□□□□□ -1.21
AMF1YOR378W IPP1P00817 287 aaKnown RBP7.5□□□□□ -1.21
AMF1YOR378W RPS16AP0CX51 143 aaKnown RBP7.5□□□□□ -1.21
AMF1YOR378W RPS16BP0CX52 143 aaKnown RBP7.5□□□□□ -1.21
AMF1YOR378W ITR1P30605 584 aa7.5□□□□□ -1.21
AMF1YOR378W MIT1P40002 666 aa7.5□□□□□ -1.21
AMF1YOR378W YJL055WP47044 245 aa7.5□□□□□ -1.21
AMF1YOR378W LYS20P48570 428 aaKnown RBP7.5□□□□□ -1.21
AMF1YOR378W HSV2P50079 448 aaPredicted RBP7.5□□□□□ -1.21
AMF1YOR378W YNL165WP53891 406 aa7.5□□□□□ -1.21
AMF1YOR378W MRP51Q02950 344 aa7.5□□□□□ -1.21
AMF1YOR378W YMR265CQ03508 461 aaKnown RBP7.5□□□□□ -1.21
AMF1YOR378W NMA1Q06178 401 aaKnown RBP7.5□□□□□ -1.21
AMF1YOR378W RCN2Q12044 265 aa7.5□□□□□ -1.21
AMF1YOR378W LYS21Q12122 440 aaKnown RBP7.5□□□□□ -1.21
AMF1YOR378W SPT14P32363 452 aa7.49□□□□□ -1.21
AMF1YOR378W FRM2P37261 193 aa7.49□□□□□ -1.21
AMF1YOR378W YBR096WP38256 230 aa7.49□□□□□ -1.21
AMF1YOR378W PUG1P40100 303 aa7.49□□□□□ -1.21
AMF1YOR378W DLS1P40366 167 aa7.49□□□□□ -1.21
AMF1YOR378W BNA6P43619 295 aa7.49□□□□□ -1.21
AMF1YOR378W LOH1P47055 219 aa7.49□□□□□ -1.21
AMF1YOR378W IRC18P47056 224 aa7.49□□□□□ -1.21
AMF1YOR378W SLI1P53304 468 aa7.49□□□□□ -1.21
AMF1YOR378W ERV29P53337 310 aa7.49□□□□□ -1.21
AMF1YOR378W ELA1P53861 379 aaPredicted RBP7.49□□□□□ -1.21
AMF1YOR378W DIG2Q03373 323 aaKnown RBP7.49□□□□□ -1.21
AMF1YOR378W PLB2Q03674 706 aa7.49□□□□□ -1.21
AMF1YOR378W YDR387CQ04162 555 aa7.49□□□□□ -1.21
AMF1YOR378W PEX30Q06169 523 aa7.49□□□□□ -1.21
AMF1YOR378W SSK1Q07084 712 aa7.49□□□□□ -1.21
AMF1YOR378W YPL199CQ08954 240 aa7.49□□□□□ -1.21
AMF1YOR378W ATG41Q12048 136 aa7.49□□□□□ -1.21
AMF1YOR378W PRP8P33334 2413 aaKnown RBP7.49□□□□□ -1.21
AMF1YOR378W SEC16P48415 2195 aaKnown RBP7.48□□□□□ -1.21
AMF1YOR378W NAM2P11325 894 aa7.48□□□□□ -1.21
AMF1YOR378W SED4P25365 1065 aa7.48□□□□□ -1.21
AMF1YOR378W ERG24P32462 438 aaKnown RBP7.48□□□□□ -1.21
AMF1YOR378W RCN1P36054 211 aa7.48□□□□□ -1.21
AMF1YOR378W YMR262WP38430 313 aa7.48□□□□□ -1.21
AMF1YOR378W XBP1P40489 647 aa7.48□□□□□ -1.21
AMF1YOR378W SCY1P53009 804 aa7.48□□□□□ -1.21
AMF1YOR378W YMR130WQ04223 302 aa7.48□□□□□ -1.21
AMF1YOR378W YOR283WQ12040 230 aaKnown RBP7.48□□□□□ -1.21
AMF1YOR378W TGS1Q12052 315 aa7.48□□□□□ -1.21
AMF1YOR378W MATALPHA1P0CY06 175 aa7.47□□□□□ -1.21
AMF1YOR378W HMLALPHA1P0CY07 175 aa7.47□□□□□ -1.21
AMF1YOR378W ERG4P25340 473 aa7.47□□□□□ -1.21
AMF1YOR378W MSS4P38994 779 aa7.47□□□□□ -1.21
AMF1YOR378W PXR1P53335 271 aaPredicted RBP7.47□□□□□ -1.21
AMF1YOR378W YAP6Q03935 383 aa7.47□□□□□ -1.21
AMF1YOR378W PEX10Q05568 337 aa7.47□□□□□ -1.21
AMF1YOR378W TPO3Q06451 622 aa7.47□□□□□ -1.21
AMF1YOR378W ASR1Q06834 288 aa7.47□□□□□ -1.21
AMF1YOR378W RAF1Q06891 181 aa7.47□□□□□ -1.21
AMF1YOR378W YBR056W-AI2HB52 66 aa7.47□□□□□ -1.21
AMF1YOR378W CAP2P13517 287 aa7.47□□□□□ -1.21
AMF1YOR378W PDA1P16387 420 aaKnown RBP7.47□□□□□ -1.21
AMF1YOR378W MKS1P34072 584 aa7.47□□□□□ -1.21
AMF1YOR378W SSH1P38353 490 aaKnown RBP7.47□□□□□ -1.21
AMF1YOR378W NIT3P49954 291 aa7.47□□□□□ -1.21
AMF1YOR378W AAH1P53909 347 aa7.47□□□□□ -1.21
AMF1YOR378W NRK1P53915 240 aa7.47□□□□□ -1.21
AMF1YOR378W RSM23Q01163 450 aa7.47□□□□□ -1.21
AMF1YOR378W MCT1Q12283 360 aa7.47□□□□□ -1.21
AMF1YOR378W COX17Q12287 69 aa7.47□□□□□ -1.21
AMF1YOR378W ORT1Q12375 292 aa7.47□□□□□ -1.21
AMF1YOR378W CDC36P06100 191 aaPredicted RBP7.46□□□□□ -1.22
AMF1YOR378W CNE1P27825 502 aa7.46□□□□□ -1.22
AMF1YOR378W PRE4P30657 266 aa7.46□□□□□ -1.22
AMF1YOR378W PPG1P32838 368 aa7.46□□□□□ -1.22
AMF1YOR378W SNC2P33328 115 aa7.46□□□□□ -1.22
AMF1YOR378W MTC6P38849 526 aa7.46□□□□□ -1.22
AMF1YOR378W ERJ5P43613 295 aaPredicted RBP7.46□□□□□ -1.22
AMF1YOR378W YIP4P53093 235 aa7.46□□□□□ -1.22
AMF1YOR378W POP6P53218 158 aa7.46□□□□□ -1.22
AMF1YOR378W YKR005CQ02203 525 aa7.46□□□□□ -1.22
AMF1YOR378W FRE3Q08905 711 aa7.46□□□□□ -1.22
AMF1YOR378W IZH2Q12442 317 aa7.46□□□□□ -1.22
AMF1YOR378W COX5BP00425 151 aa7.45□□□□□ -1.22
AMF1YOR378W PHO4P07270 312 aaKnown RBP7.45□□□□□ -1.22
AMF1YOR378W PCL1P24867 279 aa7.45□□□□□ -1.22
AMF1YOR378W KRE6P32486 720 aa7.45□□□□□ -1.22
AMF1YOR378W CLG1P35190 452 aa7.45□□□□□ -1.22
AMF1YOR378W GPI16P38875 610 aa7.45□□□□□ -1.22
AMF1YOR378W HPA3P39979 161 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms