RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	YOR283W	Q12040	230 aa	Known RBP	4.78	□□□□□ -1.64
GEP3	YOR205C	FAS1	P07149	2051 aa	Known RBP	4.78	□□□□□ -1.64
GEP3	YOR205C	CBP6	P07253	162 aa	Predicted RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	GCD1	P09032	578 aa	Predicted RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	ERG9	P29704	444 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	KRE6	P32486	720 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	SOF1	P33750	489 aa	Known RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	MOH1	P38191	138 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	SDS24	P38314	527 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	HPA3	P39979	161 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	MSY1	P48527	492 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	HSV2	P50079	448 aa	Predicted RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	ARO8	P53090	500 aa	Known RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	AIM36	Q03798	255 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	RSM24	Q03976	319 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	PEX30	Q06169	523 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	ASR1	Q06834	288 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	GRE1	Q08969	168 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
GEP3	YOR205C	PRB1	P09232	635 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	HYM1	P32464	399 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	RCN1	P36054	211 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	CHS7	P38843	316 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	MSS4	P38994	779 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	YIL169C	P40442	995 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	PHB1	P40961	287 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	ADO1	P47143	340 aa	Known RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	LYS20	P48570	428 aa	Known RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	PXR1	P53335	271 aa	Predicted RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	NRK1	P53915	240 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	RSM28	Q03430	361 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	HRI1	Q05905	244 aa	Known RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	NMA1	Q06178	401 aa	Known RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	TPO3	Q06451	622 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	MCH4	Q08268	501 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	ATG41	Q12048	136 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	LYS21	Q12122	440 aa	Known RBP	4.77	□□□□□ -1.65
GEP3	YOR205C	TY1A-BL	Q12266	440 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	YDL180W	Q12301	547 aa		4.77	□□□□□ -1.65
GEP3	YOR205C	CSF1	Q12150	2958 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	FLO9	P39712	1322 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	GPM1	P00950	247 aa	Known RBP	4.76	□□□□□ -1.65
GEP3	YOR205C	PHO4	P07270	312 aa	Known RBP	4.76	□□□□□ -1.65
GEP3	YOR205C	CDC34	P14682	295 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	CNE1	P27825	502 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	PRE4	P30657	266 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
GEP3	YOR205C	YBR096W	P38256	230 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	SSH1	P38353	490 aa	Known RBP	4.76	□□□□□ -1.65
GEP3	YOR205C	HTD2	P38790	280 aa	Known RBP	4.76	□□□□□ -1.65
GEP3	YOR205C	SMB1	P40018	196 aa	Known RBP	4.76	□□□□□ -1.65
GEP3	YOR205C	BNA6	P43619	295 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	PRY1	P47032	299 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	LOH1	P47055	219 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	YJL016W	P47072	561 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	MSE1	P48525	536 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	YGL260W	P53056	76 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	TPN1	P53099	579 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	ELA1	P53861	379 aa	Predicted RBP	4.76	□□□□□ -1.65
GEP3	YOR205C	LSM7	P53905	115 aa	Known RBP	4.76	□□□□□ -1.65
GEP3	YOR205C	AAH1	P53909	347 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	CTF19	Q02732	369 aa		4.76	□□□□□ -1.65
GEP3	YOR205C	HFA1	P32874	2273 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	GCN3	P14741	305 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	ERG24	P32462	438 aa	Known RBP	4.75	□□□□□ -1.65
GEP3	YOR205C	MRPL39	P36533	70 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	FRM2	P37261	193 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	MGE1	P38523	228 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	PTH1	P38876	190 aa	Known RBP	4.75	□□□□□ -1.65
GEP3	YOR205C	YEL057C	P39983	233 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	SCW4	P53334	386 aa	Known RBP	4.75	□□□□□ -1.65
GEP3	YOR205C	GIM3	P53900	129 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	RSM23	Q01163	450 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	MRP51	Q02950	344 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	YMR265C	Q03508	461 aa	Known RBP	4.75	□□□□□ -1.65
GEP3	YOR205C	PLB2	Q03674	706 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	YDR387C	Q04162	555 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	COQ11	Q05892	277 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	GAS2	Q06135	555 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	MRPL35	Q06678	367 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	TGS1	Q12052	315 aa		4.75	□□□□□ -1.65
GEP3	YOR205C	HTZ1	Q12692	134 aa	Known RBP	4.75	□□□□□ -1.65
GEP3	YOR205C	RPS16A	P0CX51	143 aa	Known RBP	4.74	□□□□□ -1.65
GEP3	YOR205C	RPS16B	P0CX52	143 aa	Known RBP	4.74	□□□□□ -1.65
GEP3	YOR205C	MATALPHA1	P0CY06	175 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	HMLALPHA1	P0CY07	175 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	SED4	P25365	1065 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	SNC2	P33328	115 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	ERJ5	P43613	295 aa	Predicted RBP	4.74	□□□□□ -1.65
GEP3	YOR205C	AIM25	P47140	327 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	MRPL19	P53875	158 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	SRP1	Q02821	542 aa	Known RBP	4.74	□□□□□ -1.65
GEP3	YOR205C	SRL2	Q12020	392 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	TMS1	Q12116	473 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	SCM3	Q12334	223 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	ORT1	Q12375	292 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	IRA2	P19158	3079 aa		4.74	□□□□□ -1.65
GEP3	YOR205C	CYC1	P00044	109 aa	Predicted RBP	4.73	□□□□□ -1.65
GEP3	YOR205C	CDC36	P06100	191 aa	Predicted RBP	4.73	□□□□□ -1.65
GEP3	YOR205C	HXT2	P23585	541 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms