RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W UBA3Q99344 299 aa2.86□□□□□ -1.95
SSU72YNL222W AI5_BETAQ9ZZX0 354 aa2.86□□□□□ -1.95
SSU72YNL222W RPO41P13433 1351 aaKnown RBP2.86□□□□□ -1.95
SSU72YNL222W YPK9Q12697 1472 aa2.85□□□□□ -1.95
SSU72YNL222W STE2D6VTK4 431 aa2.85□□□□□ -1.95
SSU72YNL222W YGL041W-AP0C5N3 154 aa2.85□□□□□ -1.95
SSU72YNL222W MATALPHA1P0CY06 175 aa2.85□□□□□ -1.95
SSU72YNL222W HMLALPHA1P0CY07 175 aa2.85□□□□□ -1.95
SSU72YNL222W NSP1P14907 823 aaKnown RBP2.85□□□□□ -1.95
SSU72YNL222W POL30P15873 258 aaKnown RBP2.85□□□□□ -1.95
SSU72YNL222W CIN8P27895 1000 aa2.85□□□□□ -1.95
SSU72YNL222W TCA17P32613 152 aa2.85□□□□□ -1.95
SSU72YNL222W SRP102P36057 244 aaPredicted RBP2.85□□□□□ -1.95
SSU72YNL222W FRM2P37261 193 aa2.85□□□□□ -1.95
SSU72YNL222W FIG1P38224 298 aa2.85□□□□□ -1.95
SSU72YNL222W YPT35P38815 214 aaKnown RBP2.85□□□□□ -1.95
SSU72YNL222W GGC1P38988 300 aa2.85□□□□□ -1.95
SSU72YNL222W YER121WP40076 114 aa2.85□□□□□ -1.95
SSU72YNL222W YIR035CP40579 254 aa2.85□□□□□ -1.95
SSU72YNL222W MOB2P43563 287 aa2.85□□□□□ -1.95
SSU72YNL222W EFM3P47163 339 aa2.85□□□□□ -1.95
SSU72YNL222W CCC1P47818 322 aa2.85□□□□□ -1.95
SSU72YNL222W PAC10P48363 199 aa2.85□□□□□ -1.95
SSU72YNL222W NAS6P50086 228 aa2.85□□□□□ -1.95
SSU72YNL222W YGL204CP53089 101 aa2.85□□□□□ -1.95
SSU72YNL222W VOA1P53262 265 aa2.85□□□□□ -1.95
SSU72YNL222W DBP6P53734 629 aaKnown RBP2.85□□□□□ -1.95
SSU72YNL222W CUS2P53830 285 aaPredicted RBP2.85□□□□□ -1.95
SSU72YNL222W CTF19Q02732 369 aa2.85□□□□□ -1.95
SSU72YNL222W SCS7Q03529 384 aa2.85□□□□□ -1.95
SSU72YNL222W TRM82Q03774 444 aa2.85□□□□□ -1.95
SSU72YNL222W CSI1Q04368 295 aa2.85□□□□□ -1.95
SSU72YNL222W YLR297WQ05899 129 aa2.85□□□□□ -1.95
SSU72YNL222W CUR1Q06469 252 aa2.85□□□□□ -1.95
SSU72YNL222W RFU1Q08003 200 aa2.85□□□□□ -1.95
SSU72YNL222W YOL075CQ08234 1294 aa2.85□□□□□ -1.95
SSU72YNL222W FYV7Q12247 151 aa2.85□□□□□ -1.95
SSU72YNL222W Q0144Q9ZZW2 109 aa2.85□□□□□ -1.95
SSU72YNL222W MON2P48563 1636 aaPredicted RBP2.85□□□□□ -1.95
SSU72YNL222W SRB8P25648 1427 aa2.85□□□□□ -1.95
SSU72YNL222W MET5P47169 1442 aa2.85□□□□□ -1.95
SSU72YNL222W RPL25P04456 142 aaKnown RBP2.84□□□□□ -1.95
SSU72YNL222W COS2P0CX12 379 aa2.84□□□□□ -1.95
SSU72YNL222W COS3P0CX13 379 aa2.84□□□□□ -1.95
SSU72YNL222W RPL4AP10664 362 aaKnown RBP2.84□□□□□ -1.95
SSU72YNL222W SCH9P11792 824 aaKnown RBP2.84□□□□□ -1.95
SSU72YNL222W GCN3P14741 305 aa2.84□□□□□ -1.95
SSU72YNL222W RBK1P25332 333 aa2.84□□□□□ -1.95
SSU72YNL222W SUI1P32911 108 aaKnown RBP2.84□□□□□ -1.95
SSU72YNL222W AST1P35183 429 aa2.84□□□□□ -1.95
SSU72YNL222W CLG1P35190 452 aa2.84□□□□□ -1.95
SSU72YNL222W YKL070WP36087 169 aa2.84□□□□□ -1.95
SSU72YNL222W MAL32P38158 584 aa2.84□□□□□ -1.95
SSU72YNL222W HEK2P38199 381 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SSU72YNL222W AME1P38313 324 aa2.84□□□□□ -1.95
SSU72YNL222W YHR045WP38775 560 aa2.84□□□□□ -1.95
SSU72YNL222W TRR2P38816 342 aa2.84□□□□□ -1.95
SSU72YNL222W TDA11P38854 504 aa2.84□□□□□ -1.95
SSU72YNL222W MNN9P39107 395 aaKnown RBP2.84□□□□□ -1.95
SSU72YNL222W SEC72P39742 193 aaKnown RBP2.84□□□□□ -1.95
SSU72YNL222W RGI1P40043 161 aaPredicted RBP2.84□□□□□ -1.95
SSU72YNL222W FMC1P40491 155 aa2.84□□□□□ -1.95
SSU72YNL222W COS4P43542 379 aa2.84□□□□□ -1.95
SSU72YNL222W AGP3P43548 558 aa2.84□□□□□ -1.95
SSU72YNL222W YFH7P43591 353 aa2.84□□□□□ -1.95
SSU72YNL222W RPL4BP49626 362 aaKnown RBP2.84□□□□□ -1.95
SSU72YNL222W NBP35P52920 328 aa2.84□□□□□ -1.95
SSU72YNL222W CUE3P53137 624 aaKnown RBP2.84□□□□□ -1.95
SSU72YNL222W MAL12P53341 584 aa2.84□□□□□ -1.95
SSU72YNL222W ZRG17P53735 605 aa2.84□□□□□ -1.95
SSU72YNL222W NOP13P53883 403 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SSU72YNL222W SUR7P54003 302 aa2.84□□□□□ -1.95
SSU72YNL222W TMA20P89886 181 aaPredicted RBP2.84□□□□□ -1.95
SSU72YNL222W NHP10Q03435 203 aa2.84□□□□□ -1.95
SSU72YNL222W BNA7Q04066 261 aa2.84□□□□□ -1.95
SSU72YNL222W PEX12Q04370 399 aa2.84□□□□□ -1.95
SSU72YNL222W YDR222WQ04925 415 aa2.84□□□□□ -1.95
SSU72YNL222W FAR10Q06001 478 aa2.84□□□□□ -1.95
SSU72YNL222W CTS2Q06350 511 aa2.84□□□□□ -1.95
SSU72YNL222W GPN3Q06543 272 aa2.84□□□□□ -1.95
SSU72YNL222W YFH1Q07540 174 aa2.84□□□□□ -1.95
SSU72YNL222W GRE1Q08969 168 aa2.84□□□□□ -1.95
SSU72YNL222W CDC8P00572 216 aa2.83□□□□□ -1.96
SSU72YNL222W RAD1P06777 1100 aa2.83□□□□□ -1.96
SSU72YNL222W RPS16AP0CX51 143 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W RPS16BP0CX52 143 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W BGL2P15703 313 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W PET9P18239 318 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W SNF6P18888 332 aa2.83□□□□□ -1.96
SSU72YNL222W RNA15P25299 296 aaPredicted RBP2.83□□□□□ -1.96
SSU72YNL222W RSA4P25382 515 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W CAM1P29547 415 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W GCG1P32656 232 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W RCK2P38623 610 aa2.83□□□□□ -1.96
SSU72YNL222W CYC2P38909 366 aa2.83□□□□□ -1.96
SSU72YNL222W LCP5P40079 357 aaPredicted RBP2.83□□□□□ -1.96
SSU72YNL222W RFC4P40339 323 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W CDC40P40968 455 aaPredicted RBP2.83□□□□□ -1.96
SSU72YNL222W LSM8P47093 109 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W JHD2P47156 728 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms