RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP2	YLR335W	OGG1	P53397	376 aa	Predicted RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	MTQ2	Q03920	221 aa	Predicted RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	RVB1	Q03940	463 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	LRS4	Q04087	347 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	YPR172W	Q06608	200 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	MMT2	Q08970	484 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	FCF2	Q12035	217 aa	Predicted RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	DFG16	Q99234	619 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	GAL1	P04385	528 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	HIP1	P06775	603 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	SCL1	P21243	252 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	PBN1	P25580	416 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	TIM12	P32830	109 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	SUI1	P32911	108 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	PPZ2	P33329	710 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	ALG3	P38179	458 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	ECM34	P38728	170 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	OSW5	P40219	148 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	SMK1	P41808	388 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	QRI1	P43123	477 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	YJR111C	P47148	283 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	NIF3	P53081	288 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	TYW3	P53177	273 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	ERG26	P53199	349 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	YGR042W	P53227	271 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	SCW4	P53334	386 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	APJ1	P53940	528 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	ERV25	P54837	211 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	ACT1	P60010	375 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	APM1	Q00776	475 aa	Predicted RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	PEX25	Q02969	394 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	FIT1	Q04433	528 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	RBS1	Q05672	457 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	BER1	Q06688	274 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	RDR1	Q08904	546 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	LEU9	Q12166	604 aa	Known RBP	4.04	□□□□□ -1.76
NUP2	YLR335W	Q0142	Q9ZZW4	58 aa		4.04	□□□□□ -1.76
NUP2	YLR335W	YML003W	P0CF16	290 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	URA6	P15700	204 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	YPK2	P18961	677 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	MGR1	P25573	417 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	BUB3	P26449	341 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	VAM7	P32912	316 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	PAN3	P36102	679 aa	Predicted RBP	4.03	□□□□□ -1.76
NUP2	YLR335W	SPC25	P40014	221 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	RPL10	P41805	221 aa	Known RBP	4.03	□□□□□ -1.76
NUP2	YLR335W	GPI14	P47088	403 aa	Known RBP	4.03	□□□□□ -1.76
NUP2	YLR335W	TIM21	P53220	239 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	SMA2	Q04658	369 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	DGK1	Q12382	290 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	TOM1	Q03280	3268 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	AI1	P03875	834 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	GPI12	P23797	304 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	SRB5	P32585	307 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	MSN4	P33749	630 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	GPI16	P38875	610 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	YIL060W	P40519	144 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	FAF1	P40546	346 aa	Predicted RBP	4.03	□□□□□ -1.76
NUP2	YLR335W	OTU1	P43558	301 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	CIN2	P46670	268 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	SSN8	P47821	323 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	LYS20	P48570	428 aa	Known RBP	4.03	□□□□□ -1.76
NUP2	YLR335W	YNR062C	P53748	327 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	HAS1	Q03532	505 aa	Known RBP	4.03	□□□□□ -1.76
NUP2	YLR335W	RPC11	Q04307	110 aa	Predicted RBP	4.03	□□□□□ -1.76
NUP2	YLR335W	NMA1	Q06178	401 aa	Known RBP	4.03	□□□□□ -1.76
NUP2	YLR335W	ORT1	Q12375	292 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	YLR111W	Q12528	110 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	SET6	Q12529	373 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	PET20	Q99373	253 aa		4.03	□□□□□ -1.76
NUP2	YLR335W	YLR358C	O13565	187 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	FUS1	P11710	512 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	NUP1	P20676	1076 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	PRE2	P30656	287 aa	Known RBP	4.02	□□□□□ -1.77
NUP2	YLR335W	TRS65	P32893	560 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	MDL1	P33310	695 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	SNC2	P33328	115 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	SPT10	P35208	640 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	VPS51	P36116	164 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	MRPL4	P36517	319 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	AVT5	P38176	459 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	ATG8	P38182	117 aa	RIP-Chip data	4.02	□□□□□ -1.77	not detected
NUP2	YLR335W	YPT31	P38555	223 aa	Known RBP	4.02	□□□□□ -1.77
NUP2	YLR335W	PEX28	P38848	579 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	SKN7	P38889	622 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	YNL195C	P40168	261 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	YHC3	P47040	408 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	SOL1	P50278	321 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	YGL117W	P53133	265 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	YGR012W	P53206	393 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	AAH1	P53909	347 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	YLR152C	P54072	576 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	RHO3	Q00245	231 aa	Known RBP	4.02	□□□□□ -1.77
NUP2	YLR335W	REC102	Q02721	264 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	HNT1	Q04344	158 aa	Known RBP	4.02	□□□□□ -1.77
NUP2	YLR335W	CRR1	Q05790	422 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	SYM1	Q06563	197 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	YOR365C	Q08844	703 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	ODC2	Q99297	307 aa		4.02	□□□□□ -1.77
NUP2	YLR335W	ADH3	P07246	375 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms