RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	NAS2	P40555	220 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
SGN1	YIR001C	TRS85	P46944	698 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	NOP9	P47077	666 aa	Known RBP	3.15	□□□□□ -1.91
SGN1	YIR001C	YIP5	P53108	310 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YGR168C	P53293	376 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YNR064C	P53750	290 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YML122C	Q03207	126 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	BNA7	Q04066	261 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	GGA1	Q06336	557 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	SNA4	Q07549	140 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	UIP4	Q08926	304 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	MCT1	Q12283	360 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YDL007C-A	Q2V2Q0	85 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YCL048W-A	Q2V2Q2	79 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YOL162W	P0CF19	215 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	KRR1	P25586	316 aa	Predicted RBP	3.14	□□□□□ -1.91
SGN1	YIR001C	PPA2	P28239	310 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	DAL3	P32459	195 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	GSH1	P32477	678 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
SGN1	YIR001C	CLG1	P35190	452 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	ECM8	P38246	354 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	ICS2	P38284	255 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	RFC3	P38629	340 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	ARO9	P38840	513 aa	Predicted RBP	3.14	□□□□□ -1.91
SGN1	YIR001C	CTR2	P38865	189 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	YHR218W	P38899	603 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	GET2	P40056	285 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	PFS2	P42841	465 aa	Known RBP	3.14	□□□□□ -1.91
SGN1	YIR001C	YDL186W	P48568	277 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	YNL033W	P53964	284 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	YNL019C	P53975	284 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	YMR317W	Q04893	1140 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	NNT1	Q05874	261 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	IRC25	Q07951	179 aa		3.14	□□□□□ -1.91
SGN1	YIR001C	USB1	Q12208	290 aa	Known RBP	3.14	□□□□□ -1.91
SGN1	YIR001C	WTM1	Q12363	437 aa	Known RBP	3.14	□□□□□ -1.91
SGN1	YIR001C	RPL39	P04650	51 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	CMK2	P22517	447 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	CPR2	P23285	205 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
SGN1	YIR001C	PPZ2	P33329	710 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	SRO77	P38163	1010 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	VBA2	P38358	474 aa	Known RBP	3.13	□□□□□ -1.91
SGN1	YIR001C	TRM5	P38793	499 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	MPM1	P40364	252 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	FLX1	P40464	311 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	IRC5	P43610	853 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	YGL101W	P53144	215 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	USE1	P53146	245 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	COX18	P53239	316 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	GPI1	P53306	609 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	DIG2	Q03373	323 aa	Known RBP	3.13	□□□□□ -1.91
SGN1	YIR001C	MSS11	Q03825	758 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	GPI17	Q04080	534 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	YDR391C	Q04170	232 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	PEX12	Q04370	399 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	HFD1	Q04458	532 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	ATG26	Q06321	1198 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	GPI11	Q06636	219 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	PRP11	Q07350	266 aa	Predicted RBP	3.13	□□□□□ -1.91
SGN1	YIR001C	SYC1	Q08553	188 aa	Predicted RBP	3.13	□□□□□ -1.91
SGN1	YIR001C	RRS1	Q08746	203 aa	Known RBP	3.13	□□□□□ -1.91
SGN1	YIR001C	SPC3	Q12133	184 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	RRI1	Q12468	440 aa		3.13	□□□□□ -1.91
SGN1	YIR001C	COX5B	P00425	151 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	MSS18	P08593	268 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	DSF1	P0CX08	502 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	YNR073C	P0CX09	502 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	MRPS28	P21771	286 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	CDC10	P25342	322 aa	Known RBP	3.12	□□□□□ -1.91
SGN1	YIR001C	BOS1	P25385	244 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	NTG1	P31378	399 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	YBR063C	P38083	404 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	FAT1	P38225	669 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	RPS20	P38701	121 aa	Known RBP	3.12	□□□□□ -1.91
SGN1	YIR001C	LNP1	P38878	278 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	MLH1	P38920	769 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	ALP1	P38971	573 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	LOH1	P47055	219 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	GPI8	P49018	411 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	RMD9	P53140	646 aa	Known RBP	3.12	□□□□□ -1.91
SGN1	YIR001C	GEP7	P53171	287 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	IMO32	P53219	342 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	DSL1	P53847	754 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	ADH6	Q04894	360 aa	Known RBP	3.12	□□□□□ -1.91
SGN1	YIR001C	TPO3	Q06451	622 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	SSK1	Q07084	712 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	YDL114W	Q07530	308 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	PSR1	Q07800	427 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	SRL1	Q08673	210 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	YLR108C	Q12259	485 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	POM34	Q12445	299 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	YNL162W-A	Q3E7A8	72 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	YGR035W-A	Q45U48	73 aa		3.12	□□□□□ -1.91
SGN1	YIR001C	SCEI	P03882	235 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	OPI3	P05375	206 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YER190C-B	P0CX94	160 aa		3.11	□□□□□ -1.91
SGN1	YIR001C	YEL077W-A	P0CX95	160 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms