RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C NAS2P40555 220 aa3.15□□□□□ -1.91
SGN1YIR001C SGN1P40561 250 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
SGN1YIR001C TRS85P46944 698 aa3.15□□□□□ -1.91
SGN1YIR001C NOP9P47077 666 aaKnown RBP3.15□□□□□ -1.91
SGN1YIR001C YIP5P53108 310 aa3.15□□□□□ -1.91
SGN1YIR001C YGR168CP53293 376 aa3.15□□□□□ -1.91
SGN1YIR001C YNR064CP53750 290 aa3.15□□□□□ -1.91
SGN1YIR001C YML122CQ03207 126 aa3.15□□□□□ -1.91
SGN1YIR001C BNA7Q04066 261 aa3.15□□□□□ -1.91
SGN1YIR001C GGA1Q06336 557 aa3.15□□□□□ -1.91
SGN1YIR001C SNA4Q07549 140 aa3.15□□□□□ -1.91
SGN1YIR001C UIP4Q08926 304 aa3.15□□□□□ -1.91
SGN1YIR001C MCT1Q12283 360 aa3.15□□□□□ -1.91
SGN1YIR001C YDL007C-AQ2V2Q0 85 aa3.15□□□□□ -1.91
SGN1YIR001C YCL048W-AQ2V2Q2 79 aa3.15□□□□□ -1.91
SGN1YIR001C YOL162WP0CF19 215 aa3.14□□□□□ -1.91
SGN1YIR001C KRR1P25586 316 aaPredicted RBP3.14□□□□□ -1.91
SGN1YIR001C PPA2P28239 310 aa3.14□□□□□ -1.91
SGN1YIR001C DAL3P32459 195 aa3.14□□□□□ -1.91
SGN1YIR001C GSH1P32477 678 aa3.14□□□□□ -1.91
SGN1YIR001C PAD1P33751 242 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
SGN1YIR001C CLG1P35190 452 aa3.14□□□□□ -1.91
SGN1YIR001C ECM8P38246 354 aa3.14□□□□□ -1.91
SGN1YIR001C ICS2P38284 255 aa3.14□□□□□ -1.91
SGN1YIR001C RFC3P38629 340 aa3.14□□□□□ -1.91
SGN1YIR001C ARO9P38840 513 aaPredicted RBP3.14□□□□□ -1.91
SGN1YIR001C CTR2P38865 189 aa3.14□□□□□ -1.91
SGN1YIR001C YHR218WP38899 603 aa3.14□□□□□ -1.91
SGN1YIR001C GET2P40056 285 aa3.14□□□□□ -1.91
SGN1YIR001C PFS2P42841 465 aaKnown RBP3.14□□□□□ -1.91
SGN1YIR001C YDL186WP48568 277 aa3.14□□□□□ -1.91
SGN1YIR001C YNL033WP53964 284 aa3.14□□□□□ -1.91
SGN1YIR001C YNL019CP53975 284 aa3.14□□□□□ -1.91
SGN1YIR001C YMR317WQ04893 1140 aa3.14□□□□□ -1.91
SGN1YIR001C NNT1Q05874 261 aa3.14□□□□□ -1.91
SGN1YIR001C IRC25Q07951 179 aa3.14□□□□□ -1.91
SGN1YIR001C USB1Q12208 290 aaKnown RBP3.14□□□□□ -1.91
SGN1YIR001C WTM1Q12363 437 aaKnown RBP3.14□□□□□ -1.91
SGN1YIR001C RPL39P04650 51 aa3.13□□□□□ -1.91
SGN1YIR001C CMK2P22517 447 aa3.13□□□□□ -1.91
SGN1YIR001C CPR2P23285 205 aa3.13□□□□□ -1.91
SGN1YIR001C IDH1P28834 360 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
SGN1YIR001C PPZ2P33329 710 aa3.13□□□□□ -1.91
SGN1YIR001C SRO77P38163 1010 aa3.13□□□□□ -1.91
SGN1YIR001C VBA2P38358 474 aaKnown RBP3.13□□□□□ -1.91
SGN1YIR001C TRM5P38793 499 aa3.13□□□□□ -1.91
SGN1YIR001C MPM1P40364 252 aa3.13□□□□□ -1.91
SGN1YIR001C FLX1P40464 311 aa3.13□□□□□ -1.91
SGN1YIR001C IRC5P43610 853 aa3.13□□□□□ -1.91
SGN1YIR001C YGL101WP53144 215 aa3.13□□□□□ -1.91
SGN1YIR001C USE1P53146 245 aa3.13□□□□□ -1.91
SGN1YIR001C COX18P53239 316 aa3.13□□□□□ -1.91
SGN1YIR001C GPI1P53306 609 aa3.13□□□□□ -1.91
SGN1YIR001C DIG2Q03373 323 aaKnown RBP3.13□□□□□ -1.91
SGN1YIR001C MSS11Q03825 758 aa3.13□□□□□ -1.91
SGN1YIR001C GPI17Q04080 534 aa3.13□□□□□ -1.91
SGN1YIR001C YDR391CQ04170 232 aa3.13□□□□□ -1.91
SGN1YIR001C PEX12Q04370 399 aa3.13□□□□□ -1.91
SGN1YIR001C HFD1Q04458 532 aa3.13□□□□□ -1.91
SGN1YIR001C ATG26Q06321 1198 aa3.13□□□□□ -1.91
SGN1YIR001C GPI11Q06636 219 aa3.13□□□□□ -1.91
SGN1YIR001C PRP11Q07350 266 aaPredicted RBP3.13□□□□□ -1.91
SGN1YIR001C SYC1Q08553 188 aaPredicted RBP3.13□□□□□ -1.91
SGN1YIR001C RRS1Q08746 203 aaKnown RBP3.13□□□□□ -1.91
SGN1YIR001C SPC3Q12133 184 aa3.13□□□□□ -1.91
SGN1YIR001C RRI1Q12468 440 aa3.13□□□□□ -1.91
SGN1YIR001C COX5BP00425 151 aa3.12□□□□□ -1.91
SGN1YIR001C MSS18P08593 268 aa3.12□□□□□ -1.91
SGN1YIR001C DSF1P0CX08 502 aa3.12□□□□□ -1.91
SGN1YIR001C YNR073CP0CX09 502 aa3.12□□□□□ -1.91
SGN1YIR001C MRPS28P21771 286 aa3.12□□□□□ -1.91
SGN1YIR001C CDC10P25342 322 aaKnown RBP3.12□□□□□ -1.91
SGN1YIR001C BOS1P25385 244 aa3.12□□□□□ -1.91
SGN1YIR001C NTG1P31378 399 aa3.12□□□□□ -1.91
SGN1YIR001C YBR063CP38083 404 aa3.12□□□□□ -1.91
SGN1YIR001C FAT1P38225 669 aa3.12□□□□□ -1.91
SGN1YIR001C RPS20P38701 121 aaKnown RBP3.12□□□□□ -1.91
SGN1YIR001C LNP1P38878 278 aa3.12□□□□□ -1.91
SGN1YIR001C MLH1P38920 769 aa3.12□□□□□ -1.91
SGN1YIR001C ALP1P38971 573 aa3.12□□□□□ -1.91
SGN1YIR001C LOH1P47055 219 aa3.12□□□□□ -1.91
SGN1YIR001C GPI8P49018 411 aa3.12□□□□□ -1.91
SGN1YIR001C RMD9P53140 646 aaKnown RBP3.12□□□□□ -1.91
SGN1YIR001C GEP7P53171 287 aa3.12□□□□□ -1.91
SGN1YIR001C IMO32P53219 342 aa3.12□□□□□ -1.91
SGN1YIR001C DSL1P53847 754 aa3.12□□□□□ -1.91
SGN1YIR001C ADH6Q04894 360 aaKnown RBP3.12□□□□□ -1.91
SGN1YIR001C TPO3Q06451 622 aa3.12□□□□□ -1.91
SGN1YIR001C SSK1Q07084 712 aa3.12□□□□□ -1.91
SGN1YIR001C YDL114WQ07530 308 aa3.12□□□□□ -1.91
SGN1YIR001C PSR1Q07800 427 aa3.12□□□□□ -1.91
SGN1YIR001C SRL1Q08673 210 aa3.12□□□□□ -1.91
SGN1YIR001C YLR108CQ12259 485 aa3.12□□□□□ -1.91
SGN1YIR001C POM34Q12445 299 aa3.12□□□□□ -1.91
SGN1YIR001C YNL162W-AQ3E7A8 72 aa3.12□□□□□ -1.91
SGN1YIR001C YGR035W-AQ45U48 73 aa3.12□□□□□ -1.91
SGN1YIR001C SCEIP03882 235 aa3.11□□□□□ -1.91
SGN1YIR001C OPI3P05375 206 aa3.11□□□□□ -1.91
SGN1YIR001C YER190C-BP0CX94 160 aa3.11□□□□□ -1.91
SGN1YIR001C YEL077W-AP0CX95 160 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 202.6 ms