RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C CUR1Q06469 252 aa2.88□□□□□ -1.95
RPN1YHR027C THP1Q08231 455 aa2.88□□□□□ -1.95
RPN1YHR027C GPB1Q08886 897 aa2.88□□□□□ -1.95
RPN1YHR027C YOL114CQ12322 202 aa2.88□□□□□ -1.95
RPN1YHR027C YDR262WQ12331 272 aa2.88□□□□□ -1.95
RPN1YHR027C FRE6Q12473 712 aa2.88□□□□□ -1.95
RPN1YHR027C AIM45Q12480 344 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C SRF1Q12516 437 aa2.88□□□□□ -1.95
RPN1YHR027C MSW1P04803 379 aa2.88□□□□□ -1.95
RPN1YHR027C ILV5P06168 395 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C RPS25BP0C0T4 108 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C HSP26P15992 214 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
RPN1YHR027C SNF5P18480 905 aa2.88□□□□□ -1.95
RPN1YHR027C ARE1P25628 610 aa2.88□□□□□ -1.95
RPN1YHR027C RIB5P38145 238 aa2.88□□□□□ -1.95
RPN1YHR027C HTD2P38790 280 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C YHR122WP38829 231 aa2.88□□□□□ -1.95
RPN1YHR027C FKH2P41813 862 aa2.88□□□□□ -1.95
RPN1YHR027C RMD8P43620 662 aa2.88□□□□□ -1.95
RPN1YHR027C YJL163CP46996 555 aa2.88□□□□□ -1.95
RPN1YHR027C BUL1P48524 976 aa2.88□□□□□ -1.95
RPN1YHR027C IGO1P53897 168 aa2.88□□□□□ -1.95
RPN1YHR027C MSC2Q03455 724 aa2.88□□□□□ -1.95
RPN1YHR027C IPK1Q06667 281 aa2.88□□□□□ -1.95
RPN1YHR027C BER1Q06688 274 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C HEM25Q07534 307 aa2.88□□□□□ -1.95
RPN1YHR027C GRE1Q08969 168 aa2.88□□□□□ -1.95
RPN1YHR027C YDR056CQ12025 205 aa2.88□□□□□ -1.95
RPN1YHR027C RKI1Q12189 258 aa2.88□□□□□ -1.95
RPN1YHR027C PDH1Q12428 516 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C RPS25AQ3E792 108 aaPredicted RBP2.88□□□□□ -1.95
RPN1YHR027C COX6P00427 148 aa2.88□□□□□ -1.95
RPN1YHR027C GDH1P07262 454 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C YML003WP0CF16 290 aa2.88□□□□□ -1.95
RPN1YHR027C SAM1P10659 382 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C SCH9P11792 824 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C PDA1P16387 420 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C YCR090CP25654 182 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C PMI40P29952 429 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C OAC1P32332 324 aa2.88□□□□□ -1.95
RPN1YHR027C UTR5P32630 166 aa2.88□□□□□ -1.95
RPN1YHR027C MRPL11P36521 249 aaPredicted RBP2.88□□□□□ -1.95
RPN1YHR027C MGE1P38523 228 aa2.88□□□□□ -1.95
RPN1YHR027C YHL044WP38727 235 aa2.88□□□□□ -1.95
RPN1YHR027C YHR177WP38867 453 aa2.88□□□□□ -1.95
RPN1YHR027C PRP39P39682 629 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C YIL060WP40519 144 aa2.88□□□□□ -1.95
RPN1YHR027C SET4P42948 560 aa2.88□□□□□ -1.95
RPN1YHR027C SAM37P50110 327 aa2.88□□□□□ -1.95
RPN1YHR027C ACT1P60010 375 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C RRP45Q05636 305 aaKnown RBP2.88□□□□□ -1.95
RPN1YHR027C BSP1Q06604 576 aa2.88□□□□□ -1.95
RPN1YHR027C PAU23Q07987 124 aa2.88□□□□□ -1.95
RPN1YHR027C NAT5Q08689 176 aa2.88□□□□□ -1.95
RPN1YHR027C SRL2Q12020 392 aa2.88□□□□□ -1.95
RPN1YHR027C SLM3Q12093 417 aa2.88□□□□□ -1.95
RPN1YHR027C YLL056CQ12177 298 aa2.88□□□□□ -1.95
RPN1YHR027C PRR2Q12310 699 aa2.88□□□□□ -1.95
RPN1YHR027C PAU17Q12370 124 aa2.88□□□□□ -1.95
RPN1YHR027C PMD1P32634 1753 aa2.87□□□□□ -1.95
RPN1YHR027C BGL2P15703 313 aaKnown RBP2.87□□□□□ -1.95
RPN1YHR027C DAL82P21705 255 aa2.87□□□□□ -1.95
RPN1YHR027C RBK1P25332 333 aa2.87□□□□□ -1.95
RPN1YHR027C IMG2P25642 146 aaPredicted RBP2.87□□□□□ -1.95
RPN1YHR027C YCR099CP25657 155 aa2.87□□□□□ -1.95
RPN1YHR027C PMU1P36069 295 aa2.87□□□□□ -1.95
RPN1YHR027C LDB7P38210 180 aa2.87□□□□□ -1.95
RPN1YHR027C RTC2P38279 296 aa2.87□□□□□ -1.95
RPN1YHR027C TSL1P38427 1098 aaKnown RBP2.87□□□□□ -1.95
RPN1YHR027C GPI16P38875 610 aa2.87□□□□□ -1.95
RPN1YHR027C CHL4P38907 458 aa2.87□□□□□ -1.95
RPN1YHR027C PUG1P40100 303 aa2.87□□□□□ -1.95
RPN1YHR027C EMC5P40540 141 aa2.87□□□□□ -1.95
RPN1YHR027C MGA1P53050 456 aa2.87□□□□□ -1.95
RPN1YHR027C DUO1P53168 247 aaKnown RBP2.87□□□□□ -1.95
RPN1YHR027C YGR066CP53242 292 aa2.87□□□□□ -1.95
RPN1YHR027C HST3P53687 447 aa2.87□□□□□ -1.95
RPN1YHR027C ASI3P53983 676 aa2.87□□□□□ -1.95
RPN1YHR027C CDC55Q00362 526 aa2.87□□□□□ -1.95
RPN1YHR027C CDC14Q00684 551 aa2.87□□□□□ -1.95
RPN1YHR027C YPL077CQ02831 240 aa2.87□□□□□ -1.95
RPN1YHR027C BNA5Q05979 453 aa2.87□□□□□ -1.95
RPN1YHR027C PUN1Q06991 263 aa2.87□□□□□ -1.95
RPN1YHR027C YOR059CQ08448 450 aaKnown RBP2.87□□□□□ -1.95
RPN1YHR027C TMS1Q12116 473 aa2.87□□□□□ -1.95
RPN1YHR027C RDI1Q12434 202 aa2.87□□□□□ -1.95
RPN1YHR027C YGR161W-CQ3E744 92 aa2.87□□□□□ -1.95
RPN1YHR027C SAL1D6W196 494 aa2.87□□□□□ -1.95
RPN1YHR027C HIS1P00498 297 aaKnown RBP2.87□□□□□ -1.95
RPN1YHR027C PHO2P07269 559 aa2.87□□□□□ -1.95
RPN1YHR027C RIP1P08067 215 aa2.87□□□□□ -1.95
RPN1YHR027C PAU19P0CE85 124 aa2.87□□□□□ -1.95
RPN1YHR027C PAU21P0CE86 164 aa2.87□□□□□ -1.95
RPN1YHR027C PAU22P0CE87 164 aa2.87□□□□□ -1.95
RPN1YHR027C RPB5P20434 215 aa2.87□□□□□ -1.95
RPN1YHR027C PAU3P25610 124 aa2.87□□□□□ -1.95
RPN1YHR027C POT1P27796 417 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
RPN1YHR027C AAR2P32357 355 aaPredicted RBP2.87□□□□□ -1.95
RPN1YHR027C YMC2P38087 329 aa2.87□□□□□ -1.95
RPN1YHR027C BNA4P38169 460 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms