RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C HIS6P40545 261 aa6.11□□□□□ -1.43
PUP2YGR253C YJL016WP47072 561 aa6.11□□□□□ -1.43
PUP2YGR253C NQM1P53228 333 aaPredicted RBP6.11□□□□□ -1.43
PUP2YGR253C OST6Q03723 332 aa6.11□□□□□ -1.43
PUP2YGR253C DLT1Q04216 342 aa6.11□□□□□ -1.43
PUP2YGR253C VIK1Q12045 647 aa6.11□□□□□ -1.43
PUP2YGR253C MES1P00958 751 aaKnown RBP6.1□□□□□ -1.43
PUP2YGR253C MRT4P33201 236 aaKnown RBP6.1□□□□□ -1.43
PUP2YGR253C TAT1P38085 619 aa6.1□□□□□ -1.43
PUP2YGR253C ICS2P38284 255 aa6.1□□□□□ -1.43
PUP2YGR253C GDT1P38301 280 aaPredicted RBP6.1□□□□□ -1.43
PUP2YGR253C LNP1P38878 278 aa6.1□□□□□ -1.43
PUP2YGR253C CIN4P39110 191 aa6.1□□□□□ -1.43
PUP2YGR253C SLM1P40485 686 aa6.1□□□□□ -1.43
PUP2YGR253C TIR3P40552 269 aa6.1□□□□□ -1.43
PUP2YGR253C PXR1P53335 271 aaPredicted RBP6.1□□□□□ -1.43
PUP2YGR253C ARG5,6Q01217 863 aa6.1□□□□□ -1.43
PUP2YGR253C PHO80P20052 293 aa6.09□□□□□ -1.43
PUP2YGR253C MRPS28P21771 286 aa6.09□□□□□ -1.43
PUP2YGR253C APE2P32454 952 aaKnown RBP6.09□□□□□ -1.43
PUP2YGR253C IES6P32617 166 aa6.09□□□□□ -1.43
PUP2YGR253C MRPL6P32904 214 aa6.09□□□□□ -1.43
PUP2YGR253C AAD14P42884 376 aa6.09□□□□□ -1.43
PUP2YGR253C RET2P43621 546 aa6.09□□□□□ -1.43
PUP2YGR253C CTK2P46962 323 aa6.09□□□□□ -1.43
PUP2YGR253C COS10P52924 374 aa6.09□□□□□ -1.43
PUP2YGR253C SUT1P53032 299 aaKnown RBP6.09□□□□□ -1.43
PUP2YGR253C YMR226CQ05016 267 aaKnown RBP6.09□□□□□ -1.43
PUP2YGR253C MRX8Q05473 314 aa6.09□□□□□ -1.43
PUP2YGR253C YPR098CQ06089 161 aa6.09□□□□□ -1.43
PUP2YGR253C DTD1Q07648 150 aaKnown RBP6.09□□□□□ -1.43
PUP2YGR253C YDL009CQ12210 107 aa6.09□□□□□ -1.43
PUP2YGR253C NAM2P11325 894 aa6.08□□□□□ -1.44
PUP2YGR253C ARC40P38328 384 aaKnown RBP6.08□□□□□ -1.44
PUP2YGR253C PUG1P40100 303 aa6.08□□□□□ -1.44
PUP2YGR253C ATF1P40353 525 aa6.08□□□□□ -1.44
PUP2YGR253C DIM1P41819 318 aaKnown RBP6.08□□□□□ -1.44
PUP2YGR253C NSA1P53136 463 aaPredicted RBP6.08□□□□□ -1.44
PUP2YGR253C MTL1P53214 551 aa6.08□□□□□ -1.44
PUP2YGR253C SAM50P53969 484 aa6.08□□□□□ -1.44
PUP2YGR253C YPL108WQ02872 168 aaPredicted RBP6.08□□□□□ -1.44
PUP2YGR253C YDR114CQ04597 100 aa6.08□□□□□ -1.44
PUP2YGR253C AIM6Q07716 390 aa6.08□□□□□ -1.44
PUP2YGR253C YOX1P34161 385 aa6.07□□□□□ -1.44
PUP2YGR253C TIF3P34167 436 aaKnown RBP6.07□□□□□ -1.44
PUP2YGR253C IPT1P38954 527 aa6.07□□□□□ -1.44
PUP2YGR253C RRG9P40156 214 aa6.07□□□□□ -1.44
PUP2YGR253C YDL186WP48568 277 aa6.07□□□□□ -1.44
PUP2YGR253C VOA1P53262 265 aa6.07□□□□□ -1.44
PUP2YGR253C YNR048WP53740 393 aa6.07□□□□□ -1.44
PUP2YGR253C RNH201P53942 307 aa6.07□□□□□ -1.44
PUP2YGR253C YDR239CQ03780 787 aa6.07□□□□□ -1.44
PUP2YGR253C SRL1Q08673 210 aa6.07□□□□□ -1.44
PUP2YGR253C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
PUP2YGR253C RAX2Q12465 1220 aa6.07□□□□□ -1.44
PUP2YGR253C TDH2P00358 332 aaKnown RBP6.06□□□□□ -1.44
PUP2YGR253C RPL24AP04449 155 aaKnown RBP6.06□□□□□ -1.44
PUP2YGR253C KIN28P06242 306 aa6.06□□□□□ -1.44
PUP2YGR253C ACH1P32316 526 aa6.06□□□□□ -1.44
PUP2YGR253C REC114P32841 428 aa6.06□□□□□ -1.44
PUP2YGR253C FRM2P37261 193 aa6.06□□□□□ -1.44
PUP2YGR253C AHP1P38013 176 aaKnown RBP6.06□□□□□ -1.44
PUP2YGR253C YPK3P38070 525 aa6.06□□□□□ -1.44
PUP2YGR253C TCM62P38228 572 aaKnown RBP6.06□□□□□ -1.44
PUP2YGR253C RMD6P39975 231 aa6.06□□□□□ -1.44
PUP2YGR253C AGP3P43548 558 aa6.06□□□□□ -1.44
PUP2YGR253C WSC2P53832 503 aa6.06□□□□□ -1.44
PUP2YGR253C HHT1P61830 136 aa6.06□□□□□ -1.44
PUP2YGR253C YDR248CQ03786 193 aa6.06□□□□□ -1.44
PUP2YGR253C UTP15Q04305 513 aaKnown RBP6.06□□□□□ -1.44
PUP2YGR253C YOR378WQ08902 515 aa6.06□□□□□ -1.44
PUP2YGR253C RIB3Q99258 208 aa6.06□□□□□ -1.44
PUP2YGR253C SNF4P12904 322 aa6.05□□□□□ -1.44
PUP2YGR253C GAR1P28007 205 aaKnown RBP6.05□□□□□ -1.44
PUP2YGR253C THO1P40040 218 aaKnown RBP6.05□□□□□ -1.44
PUP2YGR253C UFD1P53044 361 aa6.05□□□□□ -1.44
PUP2YGR253C RFU1Q08003 200 aa6.05□□□□□ -1.44
PUP2YGR253C GSH2Q08220 491 aa6.05□□□□□ -1.44
PUP2YGR253C RKM1Q08961 583 aaPredicted RBP6.05□□□□□ -1.44
PUP2YGR253C FCY22Q12119 530 aa6.05□□□□□ -1.44
PUP2YGR253C YOR029WQ12243 111 aa6.05□□□□□ -1.44
PUP2YGR253C ISA2Q12425 185 aa6.05□□□□□ -1.44
PUP2YGR253C LSO1Q3E827 93 aa6.05□□□□□ -1.44
PUP2YGR253C YGR035W-AQ45U48 73 aa6.05□□□□□ -1.44
PUP2YGR253C YMR105W-AQ8TGS8 64 aa6.05□□□□□ -1.44
PUP2YGR253C TPK3P05986 398 aa6.04□□□□□ -1.44
PUP2YGR253C GCD1P09032 578 aaPredicted RBP6.04□□□□□ -1.44
PUP2YGR253C RPL30P14120 105 aaKnown RBP6.04□□□□□ -1.44
PUP2YGR253C SAM35P14693 329 aa6.04□□□□□ -1.44
PUP2YGR253C FUN19P28003 413 aaPredicted RBP6.04□□□□□ -1.44
PUP2YGR253C OAC1P32332 324 aa6.04□□□□□ -1.44
PUP2YGR253C SSE2P32590 693 aaKnown RBP6.04□□□□□ -1.44
PUP2YGR253C YNK1P36010 153 aaKnown RBP6.04□□□□□ -1.44
PUP2YGR253C PEX32P38292 413 aa6.04□□□□□ -1.44
PUP2YGR253C SWP82P43554 623 aa6.04□□□□□ -1.44
PUP2YGR253C CIN2P46670 268 aa6.04□□□□□ -1.44
PUP2YGR253C GON7P46984 123 aa6.04□□□□□ -1.44
PUP2YGR253C SAY1P53324 424 aa6.04□□□□□ -1.44
PUP2YGR253C PRP3Q03338 469 aaPredicted RBP6.04□□□□□ -1.44
PUP2YGR253C YMR315WQ04869 349 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms