RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W CBP6P07253 162 aaPredicted RBP4.83□□□□□ -1.64
SHE10YGL228W PTC6P25646 442 aa4.83□□□□□ -1.64
SHE10YGL228W HOM6P31116 359 aaKnown RBP4.83□□□□□ -1.64
SHE10YGL228W SDS24P38314 527 aa4.83□□□□□ -1.64
SHE10YGL228W CCC1P47818 322 aa4.83□□□□□ -1.64
SHE10YGL228W RPA14P50106 137 aa4.83□□□□□ -1.64
SHE10YGL228W YGL204CP53089 101 aa4.83□□□□□ -1.64
SHE10YGL228W YIP4P53093 235 aa4.83□□□□□ -1.64
SHE10YGL228W PCP1P53259 346 aa4.83□□□□□ -1.64
SHE10YGL228W YMR265CQ03508 461 aaKnown RBP4.83□□□□□ -1.64
SHE10YGL228W TDA1Q03533 586 aa4.83□□□□□ -1.64
SHE10YGL228W GAS2Q06135 555 aa4.83□□□□□ -1.64
SHE10YGL228W YLR352WQ06479 807 aa4.83□□□□□ -1.64
SHE10YGL228W HEM25Q07534 307 aa4.83□□□□□ -1.64
SHE10YGL228W YPL272CQ08984 517 aa4.83□□□□□ -1.64
SHE10YGL228W RTN2Q12443 393 aa4.83□□□□□ -1.64
SHE10YGL228W SFG1Q12507 346 aa4.83□□□□□ -1.64
SHE10YGL228W QCR7P00128 127 aa4.82□□□□□ -1.64
SHE10YGL228W MSW1P04803 379 aa4.82□□□□□ -1.64
SHE10YGL228W RPB10P22139 70 aa4.82□□□□□ -1.64
SHE10YGL228W SED4P25365 1065 aa4.82□□□□□ -1.64
SHE10YGL228W PRE4P30657 266 aa4.82□□□□□ -1.64
SHE10YGL228W RPS0AP32905 252 aaKnown RBP4.82□□□□□ -1.64
SHE10YGL228W MKS1P34072 584 aa4.82□□□□□ -1.64
SHE10YGL228W SFK1P35735 353 aa4.82□□□□□ -1.64
SHE10YGL228W CCZ1P38273 704 aa4.82□□□□□ -1.64
SHE10YGL228W MGE1P38523 228 aa4.82□□□□□ -1.64
SHE10YGL228W MTC6P38849 526 aa4.82□□□□□ -1.64
SHE10YGL228W MSS4P38994 779 aa4.82□□□□□ -1.64
SHE10YGL228W IRC18P47056 224 aa4.82□□□□□ -1.64
SHE10YGL228W HSV2P50079 448 aaPredicted RBP4.82□□□□□ -1.64
SHE10YGL228W YKR005CQ02203 525 aa4.82□□□□□ -1.64
SHE10YGL228W TPO3Q06451 622 aa4.82□□□□□ -1.64
SHE10YGL228W SGA1P08019 549 aa4.81□□□□□ -1.64
SHE10YGL228W PRB1P09232 635 aa4.81□□□□□ -1.64
SHE10YGL228W SPO7P18410 259 aa4.81□□□□□ -1.64
SHE10YGL228W PUP1P25043 261 aa4.81□□□□□ -1.64
SHE10YGL228W RIB7P33312 244 aa4.81□□□□□ -1.64
SHE10YGL228W HTD2P38790 280 aaKnown RBP4.81□□□□□ -1.64
SHE10YGL228W CIN2P46670 268 aa4.81□□□□□ -1.64
SHE10YGL228W DPB11P47027 764 aaPredicted RBP4.81□□□□□ -1.64
SHE10YGL228W SOK2P53438 785 aaPredicted RBP4.81□□□□□ -1.64
SHE10YGL228W SAM50P53969 484 aa4.81□□□□□ -1.64
SHE10YGL228W SUR7P54003 302 aa4.81□□□□□ -1.64
SHE10YGL228W YLR152CP54072 576 aa4.81□□□□□ -1.64
SHE10YGL228W PEX10Q05568 337 aa4.81□□□□□ -1.64
SHE10YGL228W HRI1Q05905 244 aaKnown RBP4.81□□□□□ -1.64
SHE10YGL228W YOR283WQ12040 230 aaKnown RBP4.81□□□□□ -1.64
SHE10YGL228W PRP8P33334 2413 aaKnown RBP4.81□□□□□ -1.64
SHE10YGL228W CNE1P27825 502 aa4.8□□□□□ -1.64
SHE10YGL228W PPG1P32838 368 aa4.8□□□□□ -1.64
SHE10YGL228W HPA3P39979 161 aa4.8□□□□□ -1.64
SHE10YGL228W SLZ1P40167 298 aa4.8□□□□□ -1.64
SHE10YGL228W ATF1P40353 525 aa4.8□□□□□ -1.64
SHE10YGL228W AIM20P40451 204 aa4.8□□□□□ -1.64
SHE10YGL228W BUD25P85052 153 aa4.8□□□□□ -1.64
SHE10YGL228W RSM28Q03430 361 aa4.8□□□□□ -1.64
SHE10YGL228W RGC1Q06108 1083 aaKnown RBP4.8□□□□□ -1.64
SHE10YGL228W INP53Q12271 1107 aa4.8□□□□□ -1.64
SHE10YGL228W YDL180WQ12301 547 aa4.8□□□□□ -1.64
SHE10YGL228W ORT1Q12375 292 aa4.8□□□□□ -1.64
SHE10YGL228W COX5BP00425 151 aa4.8□□□□□ -1.64
SHE10YGL228W RPS16AP0CX51 143 aaKnown RBP4.8□□□□□ -1.64
SHE10YGL228W RPS16BP0CX52 143 aaKnown RBP4.8□□□□□ -1.64
SHE10YGL228W CAP2P13517 287 aa4.8□□□□□ -1.64
SHE10YGL228W PDA1P16387 420 aaKnown RBP4.8□□□□□ -1.64
SHE10YGL228W ATG15P25641 520 aa4.8□□□□□ -1.64
SHE10YGL228W MTC7P32633 139 aa4.8□□□□□ -1.64
SHE10YGL228W FRM2P37261 193 aa4.8□□□□□ -1.64
SHE10YGL228W RPN14P53196 417 aa4.8□□□□□ -1.64
SHE10YGL228W FMP48P53233 369 aa4.8□□□□□ -1.64
SHE10YGL228W PXR1P53335 271 aaPredicted RBP4.8□□□□□ -1.64
SHE10YGL228W LUC7Q07508 261 aaPredicted RBP4.8□□□□□ -1.64
SHE10YGL228W YDL218WQ07629 317 aa4.8□□□□□ -1.64
SHE10YGL228W RTC5Q12108 567 aaKnown RBP4.8□□□□□ -1.64
SHE10YGL228W MCT1Q12283 360 aa4.8□□□□□ -1.64
SHE10YGL228W CYC1P00044 109 aaPredicted RBP4.79□□□□□ -1.64
SHE10YGL228W MES1P00958 751 aaKnown RBP4.79□□□□□ -1.64
SHE10YGL228W SCEIP03882 235 aa4.79□□□□□ -1.64
SHE10YGL228W FUR4P05316 633 aaKnown RBP4.79□□□□□ -1.64
SHE10YGL228W ITR1P30605 584 aa4.79□□□□□ -1.64
SHE10YGL228W MRPL39P36533 70 aa4.79□□□□□ -1.64
SHE10YGL228W SSH1P38353 490 aaKnown RBP4.79□□□□□ -1.64
SHE10YGL228W RTT105P40063 208 aa4.79□□□□□ -1.64
SHE10YGL228W PUG1P40100 303 aa4.79□□□□□ -1.64
SHE10YGL228W DLS1P40366 167 aa4.79□□□□□ -1.64
SHE10YGL228W YKE4P40544 346 aa4.79□□□□□ -1.64
SHE10YGL228W AAD14P42884 376 aa4.79□□□□□ -1.64
SHE10YGL228W LOH1P47055 219 aa4.79□□□□□ -1.64
SHE10YGL228W MSE1P48525 536 aa4.79□□□□□ -1.64
SHE10YGL228W NIT3P49954 291 aa4.79□□□□□ -1.64
SHE10YGL228W ARO8P53090 500 aaKnown RBP4.79□□□□□ -1.64
SHE10YGL228W YNL165WP53891 406 aa4.79□□□□□ -1.64
SHE10YGL228W AAH1P53909 347 aa4.79□□□□□ -1.64
SHE10YGL228W YPL199CQ08954 240 aa4.79□□□□□ -1.64
SHE10YGL228W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64 RIP-Chip
SHE10YGL228W MRPS5P33759 307 aa4.78□□□□□ -1.64
SHE10YGL228W TAT1P38085 619 aa4.78□□□□□ -1.64
SHE10YGL228W YHR122WP38829 231 aa4.78□□□□□ -1.64
SHE10YGL228W BUD8P41698 603 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms