RNA–Protein interactions for RNA: YCL031C

RRP7, Transcript of Essential protein involved in rRNA processing and ribosome biogenesis, yeast

Gene RRP7, Length 894 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP7	YCL031C	YAL064W-B	O13512	126 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	PET494	P07390	489 aa	Predicted RBP	2.7	□□□□□ -1.98
RRP7	YCL031C	ZWF1	P11412	505 aa	Known RBP	2.7	□□□□□ -1.98
RRP7	YCL031C	MET16	P18408	261 aa	Predicted RBP	2.7	□□□□□ -1.98
RRP7	YCL031C	PEX3	P28795	441 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	ALK2	P32789	676 aa	Predicted RBP	2.7	□□□□□ -1.98
RRP7	YCL031C	COT1	P32798	439 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	RIB7	P33312	244 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	CAB3	P36076	571 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	RCY1	P39531	840 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	SWT21	P53873	357 aa	Predicted RBP	2.7	□□□□□ -1.98
RRP7	YCL031C	SFH1	Q06168	426 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	SEC10	Q06245	871 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	CTR3	Q06686	241 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	PRR2	Q12310	699 aa		2.7	□□□□□ -1.98
RRP7	YCL031C	HIS1	P00498	297 aa	Known RBP	2.69	□□□□□ -1.98
RRP7	YCL031C	CDC42	P19073	191 aa		2.69	□□□□□ -1.98
RRP7	YCL031C	YCR025C	P25352	136 aa		2.69	□□□□□ -1.98
RRP7	YCL031C	ERG2	P32352	222 aa		2.69	□□□□□ -1.98
RRP7	YCL031C	CAT2	P32796	670 aa	Known RBP	2.69	□□□□□ -1.98
RRP7	YCL031C	SHC1	P39000	512 aa		2.69	□□□□□ -1.98
RRP7	YCL031C	VBA1	Q04301	562 aa		2.69	□□□□□ -1.98
RRP7	YCL031C	TIM22	Q12328	207 aa		2.69	□□□□□ -1.98
RRP7	YCL031C	YEL009C-A	A0A023PZF2	135 aa		2.68	□□□□□ -1.98
RRP7	YCL031C	POP8	P38208	133 aa		2.68	□□□□□ -1.98
RRP7	YCL031C	HSM3	P38348	480 aa		2.68	□□□□□ -1.98
RRP7	YCL031C	NPT1	P39683	429 aa	Known RBP	2.68	□□□□□ -1.98
RRP7	YCL031C	FMP33	P46998	180 aa		2.68	□□□□□ -1.98
RRP7	YCL031C	KAP114	P53067	1004 aa		2.68	□□□□□ -1.98
RRP7	YCL031C	ATC1	Q04005	294 aa		2.68	□□□□□ -1.98
RRP7	YCL031C	HRT1	Q08273	121 aa		2.68	□□□□□ -1.98
RRP7	YCL031C	BTS1	Q12051	335 aa		2.68	□□□□□ -1.98
RRP7	YCL031C	ATG5	Q12380	294 aa		2.68	□□□□□ -1.98
RRP7	YCL031C	TDH2	P00358	332 aa	Known RBP	2.67	□□□□□ -1.98
RRP7	YCL031C	TDH1	P00360	332 aa	Known RBP	2.67	□□□□□ -1.98
RRP7	YCL031C	MET2	P08465	486 aa		2.67	□□□□□ -1.98
RRP7	YCL031C	MIG1	P27705	504 aa		2.67	□□□□□ -1.98
RRP7	YCL031C	SDH4	P37298	181 aa		2.67	□□□□□ -1.98
RRP7	YCL031C	SPL2	P38839	148 aa		2.67	□□□□□ -1.98
RRP7	YCL031C	SUR2	P38992	349 aa		2.67	□□□□□ -1.98
RRP7	YCL031C	MIG2	P53035	382 aa		2.67	□□□□□ -1.98
RRP7	YCL031C	LSB1	P53281	241 aa		2.67	□□□□□ -1.98
RRP7	YCL031C	ISD11	Q6Q560	94 aa		2.67	□□□□□ -1.98
RRP7	YCL031C	YOS9	Q99220	542 aa		2.67	□□□□□ -1.98
RRP7	YCL031C	NUP157	P40064	1391 aa	Known RBP	2.66	□□□□□ -1.98
RRP7	YCL031C	RPS3	P05750	240 aa	Known RBP	2.66	□□□□□ -1.98
RRP7	YCL031C	YKR032W	P36127	104 aa		2.66	□□□□□ -1.98
RRP7	YCL031C	ALG9	P53868	555 aa	Known RBP	2.66	□□□□□ -1.98
RRP7	YCL031C	ALG11	P53954	548 aa	Known RBP	2.66	□□□□□ -1.98
RRP7	YCL031C	SDC1	Q03323	175 aa		2.66	□□□□□ -1.98
RRP7	YCL031C	RPL4A	P10664	362 aa	Known RBP	2.65	□□□□□ -1.99
RRP7	YCL031C	DAL82	P21705	255 aa		2.65	□□□□□ -1.99
RRP7	YCL031C	RRT12	P25381	491 aa		2.65	□□□□□ -1.99
RRP7	YCL031C	ATG15	P25641	520 aa		2.65	□□□□□ -1.99
RRP7	YCL031C	BMH1	P29311	267 aa	Known RBP	2.65	□□□□□ -1.99
RRP7	YCL031C	YUH1	P35127	236 aa		2.65	□□□□□ -1.99
RRP7	YCL031C	OST3	P48439	350 aa		2.65	□□□□□ -1.99
RRP7	YCL031C	RPL4B	P49626	362 aa	Known RBP	2.65	□□□□□ -1.99
RRP7	YCL031C	TCB3	Q03640	1545 aa	Known RBP	2.64	□□□□□ -1.99
RRP7	YCL031C	HIS3	P06633	220 aa		2.64	□□□□□ -1.99
RRP7	YCL031C	POF1	P25576	258 aa		2.64	□□□□□ -1.99
RRP7	YCL031C	UTR5	P32630	166 aa		2.64	□□□□□ -1.99
RRP7	YCL031C	SPT8	P38915	602 aa		2.64	□□□□□ -1.99
RRP7	YCL031C	SCC4	P40090	624 aa		2.64	□□□□□ -1.99
RRP7	YCL031C	RPL10	P41805	221 aa	Known RBP	2.64	□□□□□ -1.99
RRP7	YCL031C	YJR012C	P47087	207 aa		2.64	□□□□□ -1.99
RRP7	YCL031C	SLX9	P53251	210 aa	Predicted RBP	2.64	□□□□□ -1.99
RRP7	YCL031C	MNT4	P53745	580 aa		2.64	□□□□□ -1.99
RRP7	YCL031C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
RRP7	YCL031C	FEX1	Q08913	375 aa		2.64	□□□□□ -1.99
RRP7	YCL031C	FEX2	Q08991	375 aa		2.64	□□□□□ -1.99
RRP7	YCL031C	SMT3	Q12306	101 aa	Known RBP	2.64	□□□□□ -1.99
RRP7	YCL031C	SME1	Q12330	94 aa	Predicted RBP	2.64	□□□□□ -1.99
RRP7	YCL031C	DDI1	P40087	428 aa		2.63	□□□□□ -1.99
RRP7	YCL031C	COA1	P40452	197 aa		2.63	□□□□□ -1.99
RRP7	YCL031C	YJL118W	P47022	219 aa		2.63	□□□□□ -1.99
RRP7	YCL031C	YDR209C	Q03480	137 aa		2.63	□□□□□ -1.99
RRP7	YCL031C	ADH6	Q04894	360 aa	Known RBP	2.63	□□□□□ -1.99
RRP7	YCL031C	PEX10	Q05568	337 aa		2.63	□□□□□ -1.99
RRP7	YCL031C	KAP95	Q06142	861 aa	Known RBP	2.63	□□□□□ -1.99
RRP7	YCL031C	KRE1	P17260	313 aa		2.62	□□□□□ -1.99
RRP7	YCL031C	CSG2	P35206	410 aa		2.62	□□□□□ -1.99
RRP7	YCL031C	HMT1	P38074	348 aa		2.62	□□□□□ -1.99
RRP7	YCL031C	YBL081W	P38180	368 aa	Known RBP	2.62	□□□□□ -1.99
RRP7	YCL031C	YJR141W	P47172	347 aa	Predicted RBP	2.62	□□□□□ -1.99
RRP7	YCL031C	FMP41	P53889	259 aa	Known RBP	2.62	□□□□□ -1.99
RRP7	YCL031C	IGO1	P53897	168 aa		2.62	□□□□□ -1.99
RRP7	YCL031C	YNL095C	P53932	642 aa		2.62	□□□□□ -1.99
RRP7	YCL031C	YOL107W	Q12239	342 aa		2.62	□□□□□ -1.99
RRP7	YCL031C	VPS3	P23643	1011 aa		2.61	□□□□□ -1.99
RRP7	YCL031C	DRE2	P36152	348 aa		2.61	□□□□□ -1.99
RRP7	YCL031C	NBP35	P52920	328 aa		2.61	□□□□□ -1.99
RRP7	YCL031C	NIF3	P53081	288 aa		2.61	□□□□□ -1.99
RRP7	YCL031C	SYF2	P53277	215 aa	Predicted RBP	2.61	□□□□□ -1.99
RRP7	YCL031C	OST6	Q03723	332 aa		2.61	□□□□□ -1.99
RRP7	YCL031C	LOA1	Q06508	300 aa		2.61	□□□□□ -1.99
RRP7	YCL031C	SLD7	Q08457	257 aa		2.61	□□□□□ -1.99
RRP7	YCL031C	RRP36	Q12481	300 aa	Predicted RBP	2.61	□□□□□ -1.99
RRP7	YCL031C	AI5_BETA	Q9ZZX0	354 aa		2.61	□□□□□ -1.99
RRP7	YCL031C	RSR1	P13856	272 aa		2.6	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms