RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W MSS11Q03825 758 aa5.74□□□□□ -1.49
LDB16YCL005W COX20Q04935 205 aa5.74□□□□□ -1.49
LDB16YCL005W RBS1Q05672 457 aaKnown RBP5.74□□□□□ -1.49
LDB16YCL005W TSR2Q06672 205 aaKnown RBP5.74□□□□□ -1.49
LDB16YCL005W LUC7Q07508 261 aaPredicted RBP5.74□□□□□ -1.49
LDB16YCL005W YOR376WQ08900 122 aa5.74□□□□□ -1.49
LDB16YCL005W TIR4Q12218 487 aaPredicted RBP5.74□□□□□ -1.49
LDB16YCL005W YOR343CQ12484 108 aa5.74□□□□□ -1.49
LDB16YCL005W RPS18AP0CX55 146 aaKnown RBP5.73□□□□□ -1.49
LDB16YCL005W RPS18BP0CX56 146 aaPredicted RBP5.73□□□□□ -1.49
LDB16YCL005W STE4P18851 423 aa5.73□□□□□ -1.49
LDB16YCL005W PAU2P32612 120 aa5.73□□□□□ -1.49
LDB16YCL005W WBP1P33767 430 aaKnown RBP5.73□□□□□ -1.49
LDB16YCL005W ANR2P36090 516 aaPredicted RBP5.73□□□□□ -1.49
LDB16YCL005W SRL3P36167 246 aa5.73□□□□□ -1.49
LDB16YCL005W OCA1P50946 238 aaPredicted RBP5.73□□□□□ -1.49
LDB16YCL005W BRR6P53062 197 aa5.73□□□□□ -1.49
LDB16YCL005W ERV29P53337 310 aa5.73□□□□□ -1.49
LDB16YCL005W PFA5Q03289 374 aa5.73□□□□□ -1.49
LDB16YCL005W HLR1Q04429 423 aa5.73□□□□□ -1.49
LDB16YCL005W MDM30Q05930 598 aa5.73□□□□□ -1.49
LDB16YCL005W YOR283WQ12040 230 aaKnown RBP5.73□□□□□ -1.49
LDB16YCL005W YRA1Q12159 226 aaKnown RBP5.73□□□□□ -1.49
LDB16YCL005W DIF1O13577 133 aa5.72□□□□□ -1.49
LDB16YCL005W HIS3P06633 220 aa5.72□□□□□ -1.49
LDB16YCL005W DBF2P22204 572 aa5.72□□□□□ -1.49
LDB16YCL005W CPR2P23285 205 aa5.72□□□□□ -1.49
LDB16YCL005W ITR1P30605 584 aa5.72□□□□□ -1.49
LDB16YCL005W SFK1P35735 353 aa5.72□□□□□ -1.49
LDB16YCL005W PEX32P38292 413 aa5.72□□□□□ -1.49
LDB16YCL005W URM1P40554 99 aaPredicted RBP5.72□□□□□ -1.49
LDB16YCL005W POP1P41812 875 aa5.72□□□□□ -1.49
LDB16YCL005W RPE1P46969 238 aa5.72□□□□□ -1.49
LDB16YCL005W CCC1P47818 322 aa5.72□□□□□ -1.49
LDB16YCL005W DOC1P53068 250 aa5.72□□□□□ -1.49
LDB16YCL005W TPN1P53099 579 aa5.72□□□□□ -1.49
LDB16YCL005W APM1Q00776 475 aaPredicted RBP5.72□□□□□ -1.49
LDB16YCL005W RSM28Q03430 361 aa5.72□□□□□ -1.49
LDB16YCL005W SCS7Q03529 384 aa5.72□□□□□ -1.49
LDB16YCL005W MRX8Q05473 314 aa5.72□□□□□ -1.49
LDB16YCL005W TPO3Q06451 622 aa5.72□□□□□ -1.49
LDB16YCL005W MRPL35Q06678 367 aa5.72□□□□□ -1.49
LDB16YCL005W FRE7Q12333 620 aa5.72□□□□□ -1.49
LDB16YCL005W YOR032W-AQ8TGS1 66 aa5.72□□□□□ -1.49
LDB16YCL005W SOD2P00447 233 aa5.71□□□□□ -1.5
LDB16YCL005W RPS13P05756 151 aaKnown RBP5.71□□□□□ -1.5
LDB16YCL005W YHR214C-DP0CX93 97 aa5.71□□□□□ -1.5
LDB16YCL005W SCO1P23833 295 aa5.71□□□□□ -1.5
LDB16YCL005W HYM1P32464 399 aa5.71□□□□□ -1.5
LDB16YCL005W KRE6P32486 720 aa5.71□□□□□ -1.5
LDB16YCL005W RPD3P32561 433 aa5.71□□□□□ -1.5
LDB16YCL005W SPT10P35208 640 aa5.71□□□□□ -1.5
LDB16YCL005W RCN1P36054 211 aa5.71□□□□□ -1.5
LDB16YCL005W SRP102P36057 244 aaPredicted RBP5.71□□□□□ -1.5
LDB16YCL005W GRE3P38715 327 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
LDB16YCL005W HPA3P39979 161 aa5.71□□□□□ -1.5
LDB16YCL005W YER010CP40011 234 aa5.71□□□□□ -1.5
LDB16YCL005W PKP1P40530 394 aa5.71□□□□□ -1.5
LDB16YCL005W BNA6P43619 295 aa5.71□□□□□ -1.5
LDB16YCL005W NIT2P47016 307 aa5.71□□□□□ -1.5
LDB16YCL005W YGL204CP53089 101 aa5.71□□□□□ -1.5
LDB16YCL005W LSM7P53905 115 aaKnown RBP5.71□□□□□ -1.5
LDB16YCL005W YPL039WQ03080 316 aa5.71□□□□□ -1.5
LDB16YCL005W BNA7Q04066 261 aa5.71□□□□□ -1.5
LDB16YCL005W LRS4Q04087 347 aaKnown RBP5.71□□□□□ -1.5
LDB16YCL005W YMR130WQ04223 302 aa5.71□□□□□ -1.5
LDB16YCL005W YPR147CQ06522 304 aaKnown RBP5.71□□□□□ -1.5
LDB16YCL005W RDL2Q08742 149 aaKnown RBP5.71□□□□□ -1.5
LDB16YCL005W ATG41Q12048 136 aa5.71□□□□□ -1.5
LDB16YCL005W RTC5Q12108 567 aaKnown RBP5.71□□□□□ -1.5
LDB16YCL005W SCM3Q12334 223 aa5.71□□□□□ -1.5
LDB16YCL005W IRA2P19158 3079 aa5.71□□□□□ -1.5
LDB16YCL005W YAL064W-BO13512 126 aa5.7□□□□□ -1.5
LDB16YCL005W MSW1P04803 379 aa5.7□□□□□ -1.5
LDB16YCL005W OPI3P05375 206 aa5.7□□□□□ -1.5
LDB16YCL005W ADK1P07170 222 aaKnown RBP5.7□□□□□ -1.5
LDB16YCL005W PDA1P16387 420 aaKnown RBP5.7□□□□□ -1.5
LDB16YCL005W ERG8P24521 451 aa5.7□□□□□ -1.5
LDB16YCL005W SED4P25365 1065 aa5.7□□□□□ -1.5
LDB16YCL005W RPC34P32910 317 aa5.7□□□□□ -1.5
LDB16YCL005W LEU5P38702 357 aa5.7□□□□□ -1.5
LDB16YCL005W PTH1P38876 190 aaKnown RBP5.7□□□□□ -1.5
LDB16YCL005W MSS4P38994 779 aa5.7□□□□□ -1.5
LDB16YCL005W YKE4P40544 346 aa5.7□□□□□ -1.5
LDB16YCL005W REE1P40893 198 aa5.7□□□□□ -1.5
LDB16YCL005W DPB11P47027 764 aaPredicted RBP5.7□□□□□ -1.5
LDB16YCL005W YJR120WP47157 116 aa5.7□□□□□ -1.5
LDB16YCL005W PGU1P47180 361 aa5.7□□□□□ -1.5
LDB16YCL005W YGR126WP53274 230 aa5.7□□□□□ -1.5
LDB16YCL005W MTM1P53320 366 aa5.7□□□□□ -1.5
LDB16YCL005W ATG21Q02887 496 aa5.7□□□□□ -1.5
LDB16YCL005W NUP53Q03790 475 aa5.7□□□□□ -1.5
LDB16YCL005W NNT1Q05874 261 aa5.7□□□□□ -1.5
LDB16YCL005W NMA1Q06178 401 aaKnown RBP5.7□□□□□ -1.5
LDB16YCL005W SSK1Q07084 712 aa5.7□□□□□ -1.5
LDB16YCL005W MIM1Q08176 113 aa5.7□□□□□ -1.5
LDB16YCL005W SYC1Q08553 188 aaPredicted RBP5.7□□□□□ -1.5
LDB16YCL005W SWM1Q12379 170 aa5.7□□□□□ -1.5
LDB16YCL005W YBR182C-AQ8TGU6 64 aa5.7□□□□□ -1.5
LDB16YCL005W SEC16P48415 2195 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms