RNA–Protein interactions for RNA: YBR161W

CSH1, Transcript of Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit, yeastyeast

Gene CSH1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSH1YBR161W VPS60Q03390 229 aa2.59□□□□□ -1.99
CSH1YBR161W ATG5Q12380 294 aa2.59□□□□□ -1.99
CSH1YBR161W BUD4P47136 1447 aa2.59□□□□□ -2
CSH1YBR161W FRS2P15625 503 aaKnown RBP2.58□□□□□ -2
CSH1YBR161W YSR3P23501 404 aa2.58□□□□□ -2
CSH1YBR161W ERG2P32352 222 aa2.58□□□□□ -2
CSH1YBR161W SCC4P40090 624 aa2.58□□□□□ -2
CSH1YBR161W EGD1Q02642 157 aaKnown RBP2.58□□□□□ -2
CSH1YBR161W ECM5Q03214 1411 aa2.58□□□□□ -2
CSH1YBR161W ZWF1P11412 505 aaKnown RBP2.57□□□□□ -2
CSH1YBR161W PEX18P38855 283 aa2.57□□□□□ -2
CSH1YBR161W IBA57P47158 497 aa2.57□□□□□ -2
CSH1YBR161W PEX31P53203 462 aa2.57□□□□□ -2
CSH1YBR161W FMP16Q12497 93 aa2.57□□□□□ -2
CSH1YBR161W THO2P53552 1597 aaKnown RBP2.57□□□□□ -2
CSH1YBR161W HIR3P47171 1648 aa2.57□□□□□ -2
CSH1YBR161W RPS3P05750 240 aaKnown RBP2.56□□□□□ -2
CSH1YBR161W RPC40P07703 335 aaKnown RBP2.56□□□□□ -2
CSH1YBR161W CAM1P29547 415 aaKnown RBP2.56□□□□□ -2
CSH1YBR161W SPL2P38839 148 aa2.56□□□□□ -2
CSH1YBR161W YER188WP40103 239 aa2.56□□□□□ -2
CSH1YBR161W MRX5P47007 382 aa2.56□□□□□ -2
CSH1YBR161W MND1P53102 219 aa2.56□□□□□ -2
CSH1YBR161W YNL095CP53932 642 aa2.56□□□□□ -2
CSH1YBR161W CDD1Q06549 142 aa2.56□□□□□ -2
CSH1YBR161W YEL009C-AA0A023PZF2 135 aa2.55□□□□□ -2
CSH1YBR161W TDH1P00360 332 aaKnown RBP2.55□□□□□ -2
CSH1YBR161W YKL070WP36087 169 aa2.55□□□□□ -2
CSH1YBR161W SUR2P38992 349 aa2.55□□□□□ -2
CSH1YBR161W FMP41P53889 259 aaKnown RBP2.55□□□□□ -2
CSH1YBR161W VBA1Q04301 562 aa2.55□□□□□ -2
CSH1YBR161W MDS3P53094 1487 aa2.54□□□□□ -2
CSH1YBR161W YAL064W-BO13512 126 aa2.54□□□□□ -2
CSH1YBR161W HIS3P06633 220 aa2.54□□□□□ -2
CSH1YBR161W RRT12P25381 491 aa2.54□□□□□ -2
CSH1YBR161W PEX3P28795 441 aa2.54□□□□□ -2
CSH1YBR161W ATG12P38316 186 aa2.54□□□□□ -2
CSH1YBR161W RRF1P38771 230 aa2.54□□□□□ -2
CSH1YBR161W ERV25P54837 211 aaKnown RBP2.54□□□□□ -2
CSH1YBR161W SPP2Q02521 185 aa2.54□□□□□ -2
CSH1YBR161W YPL039WQ03080 316 aa2.54□□□□□ -2
CSH1YBR161W SFH1Q06168 426 aa2.54□□□□□ -2
CSH1YBR161W SEC10Q06245 871 aa2.54□□□□□ -2
CSH1YBR161W XRN1P22147 1528 aaKnown RBP2.53□□□□□ -2
CSH1YBR161W BMH1P29311 267 aaKnown RBP2.53□□□□□ -2
CSH1YBR161W YHI9P38765 294 aa2.53□□□□□ -2
CSH1YBR161W FMP33P46998 180 aa2.53□□□□□ -2
CSH1YBR161W SSU72P53538 206 aaPredicted RBP2.53□□□□□ -2
CSH1YBR161W TRM44Q02648 567 aaKnown RBP2.53□□□□□ -2
CSH1YBR161W YOL019WQ08157 551 aa2.53□□□□□ -2
CSH1YBR161W PER33Q12144 273 aa2.53□□□□□ -2
CSH1YBR161W ISD11Q6Q560 94 aa2.53□□□□□ -2
CSH1YBR161W YOS9Q99220 542 aa2.53□□□□□ -2
CSH1YBR161W SSN2P38931 1420 aa2.52□□□□□ -2.01
CSH1YBR161W ARN2P38724 620 aa2.52□□□□□ -2.01
CSH1YBR161W MED6P38782 295 aa2.52□□□□□ -2.01
CSH1YBR161W OST3P48439 350 aa2.52□□□□□ -2.01
CSH1YBR161W RGM1Q00453 211 aa2.52□□□□□ -2.01
CSH1YBR161W SDC1Q03323 175 aa2.52□□□□□ -2.01
CSH1YBR161W SSK22P25390 1331 aaPredicted RBP2.51□□□□□ -2.01
CSH1YBR161W SSA3P09435 649 aaKnown RBP2.51□□□□□ -2.01
CSH1YBR161W POF1P25576 258 aa2.51□□□□□ -2.01
CSH1YBR161W CSG2P35206 410 aa2.51□□□□□ -2.01
CSH1YBR161W PIR5P46999 287 aa2.51□□□□□ -2.01
CSH1YBR161W TIM21P53220 239 aa2.51□□□□□ -2.01
CSH1YBR161W YMR166CQ03829 368 aa2.51□□□□□ -2.01
CSH1YBR161W LOA1Q06508 300 aa2.51□□□□□ -2.01
CSH1YBR161W HMT1P38074 348 aa2.5□□□□□ -2.01
CSH1YBR161W SHC1P39000 512 aa2.5□□□□□ -2.01
CSH1YBR161W SER33P40510 469 aa2.5□□□□□ -2.01
CSH1YBR161W YJR141WP47172 347 aaPredicted RBP2.5□□□□□ -2.01
CSH1YBR161W LSB1P53281 241 aa2.5□□□□□ -2.01
CSH1YBR161W AGC1Q12482 902 aa2.5□□□□□ -2.01
CSH1YBR161W PEP1P32319 1579 aa2.49□□□□□ -2.01
CSH1YBR161W REV3P14284 1504 aa2.49□□□□□ -2.01
CSH1YBR161W COY1P34237 679 aa2.49□□□□□ -2.01
CSH1YBR161W EBP2P36049 427 aaKnown RBP2.49□□□□□ -2.01
CSH1YBR161W NPT1P39683 429 aaKnown RBP2.49□□□□□ -2.01
CSH1YBR161W TAD2P47058 250 aa2.49□□□□□ -2.01
CSH1YBR161W EMC2P47133 292 aaKnown RBP2.49□□□□□ -2.01
CSH1YBR161W FCF1Q05498 189 aaPredicted RBP2.49□□□□□ -2.01
CSH1YBR161W ARV1Q06541 321 aa2.49□□□□□ -2.01
CSH1YBR161W CTR3Q06686 241 aa2.49□□□□□ -2.01
CSH1YBR161W YBL112CQ3E7Y4 105 aa2.49□□□□□ -2.01
CSH1YBR161W SIN3P22579 1536 aa2.48□□□□□ -2.01
CSH1YBR161W RPL4AP10664 362 aaKnown RBP2.48□□□□□ -2.01
CSH1YBR161W MET16P18408 261 aaPredicted RBP2.48□□□□□ -2.01
CSH1YBR161W HEK2P38199 381 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
CSH1YBR161W HSM3P38348 480 aa2.48□□□□□ -2.01
CSH1YBR161W RPL4BP49626 362 aaKnown RBP2.48□□□□□ -2.01
CSH1YBR161W NIF3P53081 288 aa2.48□□□□□ -2.01
CSH1YBR161W CDC14Q00684 551 aa2.48□□□□□ -2.01
CSH1YBR161W GMC2Q06201 188 aa2.48□□□□□ -2.01
CSH1YBR161W AI5_BETAQ9ZZX0 354 aa2.48□□□□□ -2.01
CSH1YBR161W STH1P32597 1359 aa2.48□□□□□ -2.01
CSH1YBR161W RPP0P05317 312 aaKnown RBP2.47□□□□□ -2.01
CSH1YBR161W SFC1P33303 322 aa2.47□□□□□ -2.01
CSH1YBR161W COA1P40452 197 aa2.47□□□□□ -2.01
CSH1YBR161W DSK2P48510 373 aa2.47□□□□□ -2.01
CSH1YBR161W RDS3Q06835 107 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms