RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	CSE2	P33308	149 aa		3.58	□□□□□ -1.84
RKM3	YBR030W	NTF2	P33331	125 aa	Known RBP	3.58	□□□□□ -1.84
RKM3	YBR030W	PRX1	P34227	261 aa	Known RBP	3.58	□□□□□ -1.84
RKM3	YBR030W	CUE1	P38428	203 aa		3.58	□□□□□ -1.84
RKM3	YBR030W	YIL001W	P40560	513 aa		3.58	□□□□□ -1.84
RKM3	YBR030W	ERG10	P41338	398 aa	Known RBP	3.58	□□□□□ -1.84
RKM3	YBR030W	ADO1	P47143	340 aa	Known RBP	3.58	□□□□□ -1.84
RKM3	YBR030W	GET1	P53192	235 aa		3.58	□□□□□ -1.84
RKM3	YBR030W	ARC18	Q05933	178 aa	Known RBP	3.58	□□□□□ -1.84
RKM3	YBR030W	RPN8	Q08723	338 aa	Known RBP	3.58	□□□□□ -1.84
RKM3	YBR030W	SNU23	Q12368	194 aa	Predicted RBP	3.58	□□□□□ -1.84
RKM3	YBR030W	YER078W-A	Q3E7A2	54 aa		3.58	□□□□□ -1.84
RKM3	YBR030W	YAL064W-B	O13512	126 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	HHF1	P02309	103 aa	Known RBP	3.57	□□□□□ -1.84
RKM3	YBR030W	STE7	P06784	515 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	TPS2	P31688	896 aa	Known RBP	3.57	□□□□□ -1.84
RKM3	YBR030W	SDH3	P33421	198 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	YKL075C	P36083	450 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	IKI1	P38874	309 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	YNL208W	P40159	199 aa	Known RBP	3.57	□□□□□ -1.84
RKM3	YBR030W	ATG18	P43601	500 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	CRH1	P53301	507 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	YNR066C	P53752	436 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	PRP38	Q00723	242 aa	Predicted RBP	3.57	□□□□□ -1.84
RKM3	YBR030W	TPS1	Q00764	495 aa	Known RBP	3.57	□□□□□ -1.84
RKM3	YBR030W	VPS60	Q03390	229 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	GRE1	Q08969	168 aa		3.57	□□□□□ -1.84
RKM3	YBR030W	YPL245W	Q12179	454 aa	Known RBP	3.57	□□□□□ -1.84
RKM3	YBR030W	GIT1	P25346	518 aa		3.56	□□□□□ -1.84
RKM3	YBR030W	ALK2	P32789	676 aa	Predicted RBP	3.56	□□□□□ -1.84
RKM3	YBR030W	SEC72	P39742	193 aa	Known RBP	3.56	□□□□□ -1.84
RKM3	YBR030W	PRE6	P40303	254 aa	Known RBP	3.56	□□□□□ -1.84
RKM3	YBR030W	ALG13	P53178	202 aa		3.56	□□□□□ -1.84
RKM3	YBR030W	NRM1	P53718	249 aa		3.56	□□□□□ -1.84
RKM3	YBR030W	SKI8	Q02793	397 aa	Predicted RBP	3.56	□□□□□ -1.84
RKM3	YBR030W	DCN1	Q12395	269 aa		3.56	□□□□□ -1.84
RKM3	YBR030W	NAG1	Q8TGN9	163 aa		3.56	□□□□□ -1.84
RKM3	YBR030W	RPL35A	P0CX84	120 aa	Known RBP	3.55	□□□□□ -1.84
RKM3	YBR030W	RPL35B	P0CX85	120 aa	Known RBP	3.55	□□□□□ -1.84
RKM3	YBR030W	ATG15	P25641	520 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	SSO1	P32867	290 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	MBA1	P38300	278 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	GOS1	P38736	223 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	PAN6	P40459	309 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	YFR057W	P43625	151 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	YJR054W	P47114	497 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	YPR098C	Q06089	161 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	COQ10	Q08058	207 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	YOR292C	Q08743	309 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	RRS1	Q08746	203 aa	Known RBP	3.55	□□□□□ -1.84
RKM3	YBR030W	JLP1	Q12358	412 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	RPL28	P02406	149 aa	Known RBP	3.55	□□□□□ -1.84
RKM3	YBR030W	CDC13	P32797	924 aa	Known RBP	3.55	□□□□□ -1.84
RKM3	YBR030W	MED8	P38304	223 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	BIR1	P47134	954 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	SDS23	P53172	527 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	YGR015C	P53208	328 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	ADD37	Q03233	198 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	YOR376W	Q08900	122 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	GPM2	Q12008	311 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	ERV2	Q12284	196 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	JID1	Q12350	301 aa		3.55	□□□□□ -1.84
RKM3	YBR030W	MRP21	P38175	177 aa		3.54	□□□□□ -1.84
RKM3	YBR030W	YER186C	P40101	306 aa		3.54	□□□□□ -1.84
RKM3	YBR030W	TRM9	P49957	279 aa		3.54	□□□□□ -1.84
RKM3	YBR030W	RHO3	Q00245	231 aa	Known RBP	3.54	□□□□□ -1.84
RKM3	YBR030W	SDC1	Q03323	175 aa		3.54	□□□□□ -1.84
RKM3	YBR030W	PBA1	Q05778	276 aa		3.54	□□□□□ -1.84
RKM3	YBR030W	IZH2	Q12442	317 aa		3.54	□□□□□ -1.84
RKM3	YBR030W	TUS1	Q06412	1307 aa		3.54	□□□□□ -1.84
RKM3	YBR030W	SIR4	P11978	1358 aa		3.54	□□□□□ -1.84
RKM3	YBR030W	YCR025C	P25352	136 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	GDH2	P33327	1092 aa	Known RBP	3.53	□□□□□ -1.84
RKM3	YBR030W	AST1	P35183	429 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	SHE1	P38200	338 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	FZO1	P38297	855 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	FRT2	P39734	528 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	NUP57	P48837	541 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	YET2	Q04210	160 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	YLR177W	Q06251	628 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	ATG17	Q06410	417 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	FDH1	Q08911	376 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	MMT2	Q08970	484 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	RFM1	Q12192	310 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	YLR126C	Q12288	251 aa		3.53	□□□□□ -1.84
RKM3	YBR030W	BCY1	P07278	416 aa	Known RBP	3.52	□□□□□ -1.85
RKM3	YBR030W	RPL4A	P10664	362 aa	Known RBP	3.52	□□□□□ -1.85
RKM3	YBR030W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.52	□□□□□ -1.85	not detected
RKM3	YBR030W	WSC4	P38739	605 aa		3.52	□□□□□ -1.85
RKM3	YBR030W	PTH1	P38876	190 aa	Known RBP	3.52	□□□□□ -1.85
RKM3	YBR030W	BMT5	P40493	336 aa		3.52	□□□□□ -1.85
RKM3	YBR030W	RPL4B	P49626	362 aa	Known RBP	3.52	□□□□□ -1.85
RKM3	YBR030W	NSA1	P53136	463 aa	Predicted RBP	3.52	□□□□□ -1.85
RKM3	YBR030W	MRS2	Q01926	470 aa		3.52	□□□□□ -1.85
RKM3	YBR030W	ELP3	Q02908	557 aa	Known RBP	3.52	□□□□□ -1.85
RKM3	YBR030W	UTP15	Q04305	513 aa	Known RBP	3.52	□□□□□ -1.85
RKM3	YBR030W	PEX10	Q05568	337 aa		3.52	□□□□□ -1.85
RKM3	YBR030W	VIK1	Q12045	647 aa		3.52	□□□□□ -1.85
RKM3	YBR030W	SPT3	P06844	337 aa		3.52	□□□□□ -1.85
RKM3	YBR030W	SNF6	P18888	332 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms