RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W PAU2P32612 120 aa3.06□□□□□ -1.92
NUP60YAR002W VPS17P32913 551 aa3.06□□□□□ -1.92
NUP60YAR002W MTH1P35198 433 aa3.06□□□□□ -1.92
NUP60YAR002W MRPL15P36523 253 aa3.06□□□□□ -1.92
NUP60YAR002W APL3P38065 1025 aa3.06□□□□□ -1.92
NUP60YAR002W IFA38P38286 347 aa3.06□□□□□ -1.92
NUP60YAR002W HTD2P38790 280 aaKnown RBP3.06□□□□□ -1.92
NUP60YAR002W PTH1P38876 190 aaKnown RBP3.06□□□□□ -1.92
NUP60YAR002W MLH1P38920 769 aa3.06□□□□□ -1.92
NUP60YAR002W PHO90P39535 881 aa3.06□□□□□ -1.92
NUP60YAR002W PMT6P42934 759 aa3.06□□□□□ -1.92
NUP60YAR002W MNN5P46982 586 aa3.06□□□□□ -1.92
NUP60YAR002W SFH5P47008 294 aa3.06□□□□□ -1.92
NUP60YAR002W YJR141WP47172 347 aaPredicted RBP3.06□□□□□ -1.92
NUP60YAR002W YGR067CP53243 804 aa3.06□□□□□ -1.92
NUP60YAR002W OGG1P53397 376 aaPredicted RBP3.06□□□□□ -1.92
NUP60YAR002W MRPS16Q02608 121 aa3.06□□□□□ -1.92
NUP60YAR002W RSM28Q03430 361 aa3.06□□□□□ -1.92
NUP60YAR002W AIM36Q03798 255 aa3.06□□□□□ -1.92
NUP60YAR002W COA4Q05809 96 aa3.06□□□□□ -1.92
NUP60YAR002W BNA5Q05979 453 aa3.06□□□□□ -1.92
NUP60YAR002W CYK3Q07533 885 aa3.06□□□□□ -1.92
NUP60YAR002W IZH3Q07959 543 aa3.06□□□□□ -1.92
NUP60YAR002W BEM2P39960 2167 aaKnown RBP3.06□□□□□ -1.92
NUP60YAR002W COX9P07255 59 aa3.05□□□□□ -1.92
NUP60YAR002W SPS2P08459 502 aa3.05□□□□□ -1.92
NUP60YAR002W RPL1AP0CX43 217 aaKnown RBP3.05□□□□□ -1.92
NUP60YAR002W RPL1BP0CX44 217 aaKnown RBP3.05□□□□□ -1.92
NUP60YAR002W NUP1P20676 1076 aa3.05□□□□□ -1.92
NUP60YAR002W YCR006CP25350 157 aa3.05□□□□□ -1.92
NUP60YAR002W ITR1P30605 584 aa3.05□□□□□ -1.92
NUP60YAR002W MDH3P32419 343 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
NUP60YAR002W KRE6P32486 720 aa3.05□□□□□ -1.92
NUP60YAR002W TRS65P32893 560 aa3.05□□□□□ -1.92
NUP60YAR002W MSN4P33749 630 aa3.05□□□□□ -1.92
NUP60YAR002W GPX1P36014 167 aa3.05□□□□□ -1.92
NUP60YAR002W CHK1P38147 527 aa3.05□□□□□ -1.92
NUP60YAR002W VBA2P38358 474 aaKnown RBP3.05□□□□□ -1.92
NUP60YAR002W NSG1P38837 291 aa3.05□□□□□ -1.92
NUP60YAR002W VPS52P39904 641 aa3.05□□□□□ -1.92
NUP60YAR002W CFD1P40558 293 aa3.05□□□□□ -1.92
NUP60YAR002W HXT9P40885 567 aa3.05□□□□□ -1.92
NUP60YAR002W POP1P41812 875 aa3.05□□□□□ -1.92
NUP60YAR002W DPB11P47027 764 aaPredicted RBP3.05□□□□□ -1.92
NUP60YAR002W TRM9P49957 279 aa3.05□□□□□ -1.92
NUP60YAR002W SEH1P53011 349 aaKnown RBP3.05□□□□□ -1.92
NUP60YAR002W DOC1P53068 250 aa3.05□□□□□ -1.92
NUP60YAR002W SAY1P53324 424 aa3.05□□□□□ -1.92
NUP60YAR002W MPA43P53583 542 aaPredicted RBP3.05□□□□□ -1.92
NUP60YAR002W MRPL50P53724 139 aa3.05□□□□□ -1.92
NUP60YAR002W MPP6P53725 186 aaPredicted RBP3.05□□□□□ -1.92
NUP60YAR002W YLR460CP54007 376 aa3.05□□□□□ -1.92
NUP60YAR002W HXT11P54862 567 aa3.05□□□□□ -1.92
NUP60YAR002W RBS1Q05672 457 aaKnown RBP3.05□□□□□ -1.92
NUP60YAR002W RRP9Q06506 573 aaKnown RBP3.05□□□□□ -1.92
NUP60YAR002W AIM6Q07716 390 aa3.05□□□□□ -1.92
NUP60YAR002W BSC6Q08280 497 aa3.05□□□□□ -1.92
NUP60YAR002W RDR1Q08904 546 aa3.05□□□□□ -1.92
NUP60YAR002W RTK1Q12100 620 aaPredicted RBP3.05□□□□□ -1.92
NUP60YAR002W YDL109CQ12103 647 aa3.05□□□□□ -1.92
NUP60YAR002W MDM32Q12171 622 aa3.05□□□□□ -1.92
NUP60YAR002W MTR10Q99189 972 aa3.05□□□□□ -1.92
NUP60YAR002W RAD52P06778 471 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W ADK1P07170 222 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W PDA1P16387 420 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W SLC1P33333 303 aa3.04□□□□□ -1.92
NUP60YAR002W PAD1P33751 242 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
NUP60YAR002W SFK1P35735 353 aa3.04□□□□□ -1.92
NUP60YAR002W MRPL3P36516 390 aa3.04□□□□□ -1.92
NUP60YAR002W PEX32P38292 413 aa3.04□□□□□ -1.92
NUP60YAR002W MTC4P38335 694 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W FET3P38993 636 aa3.04□□□□□ -1.92
NUP60YAR002W PKP1P40530 394 aa3.04□□□□□ -1.92
NUP60YAR002W BNA6P43619 295 aa3.04□□□□□ -1.92
NUP60YAR002W ALK1P43633 760 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W YGR266WP53326 701 aa3.04□□□□□ -1.92
NUP60YAR002W NGL2Q03264 515 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W EKI1Q03764 534 aa3.04□□□□□ -1.92
NUP60YAR002W PLP1Q04004 230 aa3.04□□□□□ -1.92
NUP60YAR002W YMR130WQ04223 302 aa3.04□□□□□ -1.92
NUP60YAR002W MRPL1Q04599 285 aa3.04□□□□□ -1.92
NUP60YAR002W PAL1Q05518 499 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W ASR1Q06834 288 aa3.04□□□□□ -1.92
NUP60YAR002W SSK1Q07084 712 aa3.04□□□□□ -1.92
NUP60YAR002W COQ10Q08058 207 aa3.04□□□□□ -1.92
NUP60YAR002W HRT1Q08273 121 aa3.04□□□□□ -1.92
NUP60YAR002W MCP1Q12106 302 aa3.04□□□□□ -1.92
NUP60YAR002W BAG7Q12128 409 aa3.04□□□□□ -1.92
NUP60YAR002W RLM1Q12224 676 aa3.04□□□□□ -1.92
NUP60YAR002W SKM1Q12469 655 aa3.04□□□□□ -1.92
NUP60YAR002W SET6Q12529 373 aa3.04□□□□□ -1.92
NUP60YAR002W NCP1P16603 691 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W GLK1P17709 500 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W RPB8P20436 146 aa3.04□□□□□ -1.92
NUP60YAR002W FAA1P30624 700 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W ATS1P31386 333 aa3.04□□□□□ -1.92
NUP60YAR002W ERG24P32462 438 aaKnown RBP3.04□□□□□ -1.92
NUP60YAR002W EMP70P32802 667 aa3.04□□□□□ -1.92
NUP60YAR002W TAF14P35189 244 aa3.04□□□□□ -1.92
NUP60YAR002W ELF1P36053 145 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms