RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C YFL040WP43562 540 aa1.74□□□□□ -2.13
RPB11YOL005C YNR066CP53752 436 aa1.74□□□□□ -2.13
RPB11YOL005C SMD1Q02260 146 aaPredicted RBP1.74□□□□□ -2.13
RPB11YOL005C VPS20Q04272 221 aa1.74□□□□□ -2.13
RPB11YOL005C YLR012CQ07927 99 aa1.74□□□□□ -2.13
RPB11YOL005C VIK1Q12045 647 aa1.74□□□□□ -2.13
RPB11YOL005C PAA1Q12447 191 aaKnown RBP1.74□□□□□ -2.13
RPB11YOL005C RSF2P46974 1380 aa1.73□□□□□ -2.13
RPB11YOL005C OSM1P21375 501 aaKnown RBP1.73□□□□□ -2.13
RPB11YOL005C PET18P25362 215 aa1.73□□□□□ -2.13
RPB11YOL005C RPL16BP26785 198 aaKnown RBP1.73□□□□□ -2.13
RPB11YOL005C YDR089WP38966 869 aa1.73□□□□□ -2.13
RPB11YOL005C SOP4P39543 234 aaPredicted RBP1.73□□□□□ -2.13
RPB11YOL005C PES4P39684 611 aa1.73□□□□□ -2.13
RPB11YOL005C RIB4P50861 169 aaPredicted RBP1.73□□□□□ -2.13
RPB11YOL005C VOA1P53262 265 aa1.73□□□□□ -2.13
RPB11YOL005C DBP6P53734 629 aaKnown RBP1.73□□□□□ -2.13
RPB11YOL005C ZRG17P53735 605 aa1.73□□□□□ -2.13
RPB11YOL005C YPL278CQ08990 100 aa1.73□□□□□ -2.13
RPB11YOL005C RRP42Q12277 265 aaPredicted RBP1.73□□□□□ -2.13
RPB11YOL005C LAG2Q92325 660 aa1.73□□□□□ -2.13
RPB11YOL005C IZH4Q99393 312 aa1.73□□□□□ -2.13
RPB11YOL005C RRP5Q05022 1729 aaKnown RBP1.73□□□□□ -2.13
RPB11YOL005C ROM2P51862 1356 aaKnown RBP1.72□□□□□ -2.13
RPB11YOL005C GCD2P12754 651 aaPredicted RBP1.72□□□□□ -2.13
RPB11YOL005C CUP2P15315 225 aa1.72□□□□□ -2.13
RPB11YOL005C AGA2P32781 87 aa1.72□□□□□ -2.13
RPB11YOL005C MRPL6P32904 214 aa1.72□□□□□ -2.13
RPB11YOL005C SWD2P36104 329 aaPredicted RBP1.72□□□□□ -2.13
RPB11YOL005C YIL012WP40551 113 aa1.72□□□□□ -2.13
RPB11YOL005C MIC19P43594 170 aa1.72□□□□□ -2.13
RPB11YOL005C OKP1P53298 406 aa1.72□□□□□ -2.13
RPB11YOL005C PRO2P54885 456 aaKnown RBP1.72□□□□□ -2.13
RPB11YOL005C UBX2Q04228 584 aa1.72□□□□□ -2.13
RPB11YOL005C MGR3Q04472 501 aa1.72□□□□□ -2.13
RPB11YOL005C SEC13Q04491 297 aaKnown RBP1.72□□□□□ -2.13
RPB11YOL005C ARC18Q05933 178 aaKnown RBP1.72□□□□□ -2.13
RPB11YOL005C YOR292CQ08743 309 aa1.72□□□□□ -2.13
RPB11YOL005C RFM1Q12192 310 aa1.72□□□□□ -2.13
RPB11YOL005C TRM10Q12400 293 aa1.72□□□□□ -2.13
RPB11YOL005C ERP3Q12403 225 aa1.72□□□□□ -2.13
RPB11YOL005C RPO41P13433 1351 aaKnown RBP1.72□□□□□ -2.13
RPB11YOL005C ADE6P38972 1358 aaKnown RBP1.72□□□□□ -2.13
RPB11YOL005C TY4B-HP0C2J7 1802 aa1.71□□□□□ -2.14
RPB11YOL005C TY4B-JP47024 1803 aa1.71□□□□□ -2.14
RPB11YOL005C TDH3P00359 332 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
RPB11YOL005C SAR1P20606 190 aaKnown RBP1.71□□□□□ -2.14
RPB11YOL005C ICL1P28240 557 aaPredicted RBP1.71□□□□□ -2.14
RPB11YOL005C CDC13P32797 924 aaKnown RBP1.71□□□□□ -2.14
RPB11YOL005C YPC1P38298 316 aa1.71□□□□□ -2.14
RPB11YOL005C ASP1P38986 381 aaPredicted RBP1.71□□□□□ -2.14
RPB11YOL005C MNN9P39107 395 aaKnown RBP1.71□□□□□ -2.14
RPB11YOL005C EDC2P40023 145 aaPredicted RBP1.71□□□□□ -2.14
RPB11YOL005C CPR7P47103 393 aa1.71□□□□□ -2.14
RPB11YOL005C SWC4P53201 476 aa1.71□□□□□ -2.14
RPB11YOL005C CUR1Q06469 252 aa1.71□□□□□ -2.14
RPB11YOL005C PFK27Q12471 397 aaPredicted RBP1.71□□□□□ -2.14
RPB11YOL005C DCP1Q12517 231 aaPredicted RBP1.71□□□□□ -2.14
RPB11YOL005C URB1P34241 1764 aaKnown RBP1.71□□□□□ -2.14
RPB11YOL005C YRF1-2P40105 1681 aa1.71□□□□□ -2.14
RPB11YOL005C RPS23AP0CX29 145 aaKnown RBP1.7□□□□□ -2.14
RPB11YOL005C RPS23BP0CX30 145 aa1.7□□□□□ -2.14
RPB11YOL005C IMP1P28627 190 aa1.7□□□□□ -2.14
RPB11YOL005C YBR062CP38239 180 aa1.7□□□□□ -2.14
RPB11YOL005C COS4P43542 379 aa1.7□□□□□ -2.14
RPB11YOL005C VTI1Q04338 217 aa1.7□□□□□ -2.14
RPB11YOL005C YLR419WQ06698 1435 aaKnown RBP1.7□□□□□ -2.14
RPB11YOL005C APC9Q12107 265 aa1.7□□□□□ -2.14
RPB11YOL005C POM33Q12164 279 aa1.7□□□□□ -2.14
RPB11YOL005C IES3Q12345 250 aa1.7□□□□□ -2.14
RPB11YOL005C PRP46Q12417 451 aaPredicted RBP1.7□□□□□ -2.14
RPB11YOL005C RPL31AP0C2H8 113 aaKnown RBP1.69□□□□□ -2.14
RPB11YOL005C CSM1P25651 190 aa1.69□□□□□ -2.14
RPB11YOL005C RPL5P26321 297 aaKnown RBP1.69□□□□□ -2.14
RPB11YOL005C RPC25P35718 212 aa1.69□□□□□ -2.14
RPB11YOL005C GPX1P36014 167 aa1.69□□□□□ -2.14
RPB11YOL005C MCH2P36032 473 aa1.69□□□□□ -2.14
RPB11YOL005C AIM29P36154 155 aa1.69□□□□□ -2.14
RPB11YOL005C TDA11P38854 504 aa1.69□□□□□ -2.14
RPB11YOL005C ECO1P43605 281 aa1.69□□□□□ -2.14
RPB11YOL005C COX16P47081 118 aa1.69□□□□□ -2.14
RPB11YOL005C PRP24P49960 444 aaKnown RBP1.69□□□□□ -2.14
RPB11YOL005C VAC14Q06708 880 aa1.69□□□□□ -2.14
RPB11YOL005C DIB1Q06819 143 aaPredicted RBP1.69□□□□□ -2.14
RPB11YOL005C ASR1Q06834 288 aa1.69□□□□□ -2.14
RPB11YOL005C SIA1Q12212 622 aa1.69□□□□□ -2.14
RPB11YOL005C YPR064WQ12492 139 aa1.69□□□□□ -2.14
RPB11YOL005C FKS3Q04952 1785 aa1.69□□□□□ -2.14
RPB11YOL005C YPR096CO13587 100 aa1.68□□□□□ -2.14
RPB11YOL005C GPI12P23797 304 aa1.68□□□□□ -2.14
RPB11YOL005C IME2P32581 645 aa1.68□□□□□ -2.14
RPB11YOL005C CSE1P33307 960 aa1.68□□□□□ -2.14
RPB11YOL005C YKL063CP35725 167 aa1.68□□□□□ -2.14
RPB11YOL005C TPO5P36029 618 aa1.68□□□□□ -2.14
RPB11YOL005C RTR1P40084 226 aaPredicted RBP1.68□□□□□ -2.14
RPB11YOL005C YIA6P40556 373 aa1.68□□□□□ -2.14
RPB11YOL005C PNC1P53184 216 aaKnown RBP1.68□□□□□ -2.14
RPB11YOL005C TRM44Q02648 567 aaKnown RBP1.68□□□□□ -2.14
RPB11YOL005C CSI1Q04368 295 aa1.68□□□□□ -2.14
RPB11YOL005C YDR222WQ04925 415 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 283.2 ms