RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	TPI1	P00942	248 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	6.62	□□□□□ -1.35	not detected
MSB3	YNL293W	SRM1	P21827	482 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	ADH7	P25377	361 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	HOG1	P32485	435 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	UGX2	P32772	223 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	SRP68	P38687	599 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	YHL044W	P38727	235 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	GCV3	P39726	170 aa	Predicted RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	SNU13	P39990	126 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	BMT5	P40493	336 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	PHB2	P50085	310 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	FMP41	P53889	259 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	YML018C	Q03730	393 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	YDR132C	Q03900	495 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	CSI2	Q08054	341 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	COQ10	Q08058	207 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	MMT2	Q08970	484 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	UPC2	Q12151	913 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	PHO2	P07269	559 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	YPR170W-B	P0C5R9	85 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	AMD1	P15274	810 aa	Known RBP	6.61	□□□□□ -1.35
MSB3	YNL293W	YCP4	P25349	247 aa	Known RBP	6.61	□□□□□ -1.35
MSB3	YNL293W	LSB5	P25369	354 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	ARP2	P32381	391 aa	Known RBP	6.61	□□□□□ -1.35
MSB3	YNL293W	MRP20	P32387	263 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	SRB5	P32585	307 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	BCS1	P32839	456 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	ROT2	P38138	954 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	LSM5	P40089	93 aa	Known RBP	6.61	□□□□□ -1.35
MSB3	YNL293W	MGS1	P40151	587 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	IME4	P41833	600 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	SPG5	P42933	373 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	OST3	P48439	350 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	MPC1	P53157	130 aa	Known RBP	6.61	□□□□□ -1.35
MSB3	YNL293W	BOR1	P53838	576 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	CCE1	Q03702	353 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	CRF1	Q04930	467 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	YOL131W	Q08270	108 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	JLP1	Q12358	412 aa		6.61	□□□□□ -1.35
MSB3	YNL293W	SAL1	D6W196	494 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	URK1	P27515	501 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	SDH3	P33421	198 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	ASH1	P34233	588 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	UBS1	P38290	277 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	ATG12	P38316	186 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YEL057C	P39983	233 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	PUG1	P40100	303 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	SAM37	P50110	327 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	SGF73	P53165	657 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	PUS6	P53294	404 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YAP1802	P53309	568 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YNL260C	P53846	198 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	ALG11	P53954	548 aa	Known RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	PKR1	Q03880	122 aa	Known RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	ADH6	Q04894	360 aa	Known RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	DAL4	Q04895	635 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YDR222W	Q04925	415 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	HRD3	Q05787	833 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	TPO3	Q06451	622 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	CDD1	Q06549	142 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YLR422W	Q06409	1932 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	RPS4A	P0CX35	261 aa	Known RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	RPS4B	P0CX36	261 aa	Known RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	YFL068W	P0CX99	160 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YLL066W-A	P0CY00	160 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YLL067W-A	P0CY01	160 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	DAL82	P21705	255 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	PHD1	P36093	366 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YBL029W	P38201	376 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	TOS1	P38288	455 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	MUP3	P38734	546 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	GDI1	P39958	451 aa	Known RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	COX15	P40086	486 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	RFC4	P40339	323 aa	Known RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	YJL068C	P40363	299 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	LYS12	P40495	371 aa	Known RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	MOB2	P43563	287 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YGR066C	P53242	292 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	SYF2	P53277	215 aa	Predicted RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	MPP6	P53725	186 aa	Predicted RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	ATG4	P53867	494 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	TGL2	P54857	326 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	OAZ1	Q02803	292 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	ELC1	Q03071	99 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	PEX29	Q03370	554 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	YTM1	Q12024	460 aa	Predicted RBP	6.6	□□□□□ -1.35
MSB3	YNL293W	YCR075W-A	Q3E830	75 aa		6.6	□□□□□ -1.35
MSB3	YNL293W	GDH1	P07262	454 aa	Known RBP	6.59	□□□□□ -1.35
MSB3	YNL293W	SEC22	P22214	214 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	YKL151C	P36059	337 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	WSC4	P38739	605 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	FIR1	P40020	876 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	YER158C	P40095	573 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	YJL171C	P46992	396 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	SDT1	P53078	280 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	GIP3	Q03016	1276 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	VBA1	Q04301	562 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	PIN3	Q06449	215 aa		6.59	□□□□□ -1.35
MSB3	YNL293W	FRE8	Q12209	686 aa		6.59	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms