RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C SHE2P36068 246 aaKnown RBP RIP-Chip data0.73□□□□□ -2.29not detected
RKR1YMR247C COS8P38723 381 aa0.73□□□□□ -2.29
RKR1YMR247C CIN2P46670 268 aa0.73□□□□□ -2.29
RKR1YMR247C YJR054WP47114 497 aa0.73□□□□□ -2.29
RKR1YMR247C KAP114P53067 1004 aa0.73□□□□□ -2.29
RKR1YMR247C TIM21P53220 239 aa0.73□□□□□ -2.29
RKR1YMR247C GOR1P53839 350 aa0.73□□□□□ -2.29
RKR1YMR247C DIA1P54005 336 aa0.73□□□□□ -2.29
RKR1YMR247C IRC4Q03036 179 aa0.73□□□□□ -2.29
RKR1YMR247C CSM4Q08955 156 aa0.73□□□□□ -2.29
RKR1YMR247C AKR2Q12013 749 aa0.73□□□□□ -2.29
RKR1YMR247C BOL1Q3E793 110 aa0.73□□□□□ -2.29
RKR1YMR247C TY3B-IQ7LHG5 1498 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C ADH2P00331 348 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C TDH3P00359 332 aaKnown RBP RIP-Chip data0.73□□□□□ -2.29not detected
RKR1YMR247C RAD51P25454 400 aa0.73□□□□□ -2.29
RKR1YMR247C TKL2P33315 681 aa0.73□□□□□ -2.29
RKR1YMR247C ECM4P36156 370 aa0.73□□□□□ -2.29
RKR1YMR247C SWD3P38123 315 aa0.73□□□□□ -2.29
RKR1YMR247C RCK1P38622 512 aa0.73□□□□□ -2.29
RKR1YMR247C YPT35P38815 214 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C SVP26P38869 228 aa0.73□□□□□ -2.29
RKR1YMR247C CTK3P46963 296 aaPredicted RBP0.73□□□□□ -2.29
RKR1YMR247C WSC2P53832 503 aa0.73□□□□□ -2.29
RKR1YMR247C GIS2P53849 153 aaKnown RBP RIP-Chip data0.73□□□□□ -2.29not detected
RKR1YMR247C PDR16P53860 351 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C YNL143CP53908 130 aa0.73□□□□□ -2.29
RKR1YMR247C YNL040WP53960 456 aaPredicted RBP0.73□□□□□ -2.29
RKR1YMR247C YML018CQ03730 393 aa0.73□□□□□ -2.29
RKR1YMR247C UTP15Q04305 513 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C PEX10Q05568 337 aa0.73□□□□□ -2.29
RKR1YMR247C MRPL35Q06678 367 aa0.73□□□□□ -2.29
RKR1YMR247C USB1Q12208 290 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C IES3Q12345 250 aa0.73□□□□□ -2.29
RKR1YMR247C RKM5Q12367 367 aa0.73□□□□□ -2.29
RKR1YMR247C PRP46Q12417 451 aaPredicted RBP0.73□□□□□ -2.29
RKR1YMR247C BI3Q9ZZW7 517 aa0.73□□□□□ -2.29
RKR1YMR247C MMS1Q06211 1407 aa0.73□□□□□ -2.29
RKR1YMR247C AUS1Q08409 1394 aa0.73□□□□□ -2.29
RKR1YMR247C PET494P07390 489 aaPredicted RBP0.73□□□□□ -2.29
RKR1YMR247C IMA3P0CW40 589 aa0.73□□□□□ -2.29
RKR1YMR247C IMA4P0CW41 589 aa0.73□□□□□ -2.29
RKR1YMR247C HXT2P23585 541 aa0.73□□□□□ -2.29
RKR1YMR247C PTK1P36002 662 aaPredicted RBP0.73□□□□□ -2.29
RKR1YMR247C RFS1P38234 210 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C DOG1P38774 246 aa0.73□□□□□ -2.29
RKR1YMR247C AVT6P40074 448 aa0.73□□□□□ -2.29
RKR1YMR247C SIM1P40472 476 aa0.73□□□□□ -2.29
RKR1YMR247C LSG1P53145 640 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C YGR266WP53326 701 aa0.73□□□□□ -2.29
RKR1YMR247C AAH1P53909 347 aa0.73□□□□□ -2.29
RKR1YMR247C SMD1Q02260 146 aaPredicted RBP0.73□□□□□ -2.29
RKR1YMR247C RNY1Q02933 434 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C LIP2Q06005 328 aa0.73□□□□□ -2.29
RKR1YMR247C ARR1Q06596 294 aa0.73□□□□□ -2.29
RKR1YMR247C IMA2Q08295 589 aa0.73□□□□□ -2.29
RKR1YMR247C YOL107WQ12239 342 aa0.73□□□□□ -2.29
RKR1YMR247C UTP23Q12339 254 aaKnown RBP0.73□□□□□ -2.29
RKR1YMR247C TFC7Q12415 435 aa0.73□□□□□ -2.29
RKR1YMR247C GIS3Q12418 502 aa0.73□□□□□ -2.29
RKR1YMR247C YRF1-3P0CX14 1859 aa0.73□□□□□ -2.29
RKR1YMR247C YRF1-7P0CX15 1859 aa0.73□□□□□ -2.29
RKR1YMR247C YRF1-6P53819 1859 aa0.73□□□□□ -2.29
RKR1YMR247C VTH2P40890 1549 aa0.73□□□□□ -2.29
RKR1YMR247C SNT2P53127 1403 aa0.72□□□□□ -2.29
RKR1YMR247C TDH1P00360 332 aaKnown RBP0.72□□□□□ -2.29
RKR1YMR247C RPP0P05317 312 aaKnown RBP0.72□□□□□ -2.29
RKR1YMR247C RPC40P07703 335 aaKnown RBP0.72□□□□□ -2.29
RKR1YMR247C GAL7P08431 366 aa0.72□□□□□ -2.29
RKR1YMR247C TPM1P17536 199 aaKnown RBP0.72□□□□□ -2.29
RKR1YMR247C ITR1P30605 584 aa0.72□□□□□ -2.29
RKR1YMR247C KRE6P32486 720 aa0.72□□□□□ -2.29
RKR1YMR247C SKG6P32900 734 aaPredicted RBP0.72□□□□□ -2.29
RKR1YMR247C RPC37P36121 282 aa0.72□□□□□ -2.29
RKR1YMR247C PFS1P38872 237 aa0.72□□□□□ -2.29
RKR1YMR247C YDR089WP38966 869 aa0.72□□□□□ -2.29
RKR1YMR247C SOP4P39543 234 aaPredicted RBP0.72□□□□□ -2.29
RKR1YMR247C PRP39P39682 629 aaKnown RBP0.72□□□□□ -2.29
RKR1YMR247C MND1P53102 219 aa0.72□□□□□ -2.29
RKR1YMR247C YGL088WP53151 121 aa0.72□□□□□ -2.29
RKR1YMR247C YNL095CP53932 642 aa0.72□□□□□ -2.29
RKR1YMR247C TIM10P87108 93 aa0.72□□□□□ -2.29
RKR1YMR247C TDA1Q03533 586 aa0.72□□□□□ -2.29
RKR1YMR247C RRG8Q06109 277 aa0.72□□□□□ -2.29
RKR1YMR247C ATG17Q06410 417 aa0.72□□□□□ -2.29
RKR1YMR247C SIL1Q08199 421 aa0.72□□□□□ -2.29
RKR1YMR247C MED4Q12343 284 aa0.72□□□□□ -2.29
RKR1YMR247C YPR064WQ12492 139 aa0.72□□□□□ -2.29
RKR1YMR247C YOS9Q99220 542 aa0.72□□□□□ -2.29
RKR1YMR247C BUD4P47136 1447 aa0.72□□□□□ -2.29
RKR1YMR247C YAL064W-BO13512 126 aa0.72□□□□□ -2.29
RKR1YMR247C TY1B-AO13527 1196 aaKnown RBP0.72□□□□□ -2.29
RKR1YMR247C ILV1P00927 576 aaKnown RBP0.72□□□□□ -2.29
RKR1YMR247C ARO3P14843 370 aaKnown RBP0.72□□□□□ -2.29
RKR1YMR247C VMA6P32366 345 aaKnown RBP0.72□□□□□ -2.29
RKR1YMR247C YSC83P32792 385 aa0.72□□□□□ -2.29
RKR1YMR247C COY1P34237 679 aa0.72□□□□□ -2.29
RKR1YMR247C KDX1P36005 433 aa0.72□□□□□ -2.29
RKR1YMR247C YBR137WP38276 179 aa0.72□□□□□ -2.29
RKR1YMR247C YSW1P38280 609 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms