RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W BUD17P53727 317 aa3.47□□□□□ -1.85
USA1YML029W YMR087WQ04299 284 aa3.47□□□□□ -1.85
USA1YML029W FMP42Q04991 504 aa3.47□□□□□ -1.85
USA1YML029W YDR286CQ05530 114 aa3.47□□□□□ -1.85
USA1YML029W YLR346CQ06139 101 aa3.47□□□□□ -1.85
USA1YML029W NEJ1Q06148 342 aa3.47□□□□□ -1.85
USA1YML029W RRI1Q12468 440 aa3.47□□□□□ -1.85
USA1YML029W TOR1P35169 2470 aa3.47□□□□□ -1.85
USA1YML029W MET2P08465 486 aa3.47□□□□□ -1.85
USA1YML029W MDH1P17505 334 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
USA1YML029W YPK2P18961 677 aa3.47□□□□□ -1.85
USA1YML029W CAM1P29547 415 aaKnown RBP3.47□□□□□ -1.85
USA1YML029W NDC1P32500 655 aa3.47□□□□□ -1.85
USA1YML029W FET3P38993 636 aa3.47□□□□□ -1.85
USA1YML029W AIM10P39965 576 aaKnown RBP3.47□□□□□ -1.85
USA1YML029W YNL208WP40159 199 aaKnown RBP3.47□□□□□ -1.85
USA1YML029W TOK1P40310 691 aa3.47□□□□□ -1.85
USA1YML029W SSY5P47002 699 aa3.47□□□□□ -1.85
USA1YML029W EFM3P47163 339 aa3.47□□□□□ -1.85
USA1YML029W BUD9P53226 547 aa3.47□□□□□ -1.85
USA1YML029W YNR062CP53748 327 aa3.47□□□□□ -1.85
USA1YML029W FIN1Q03898 291 aa3.47□□□□□ -1.85
USA1YML029W ARR2Q06597 130 aa3.47□□□□□ -1.85
USA1YML029W THP3Q12049 470 aaKnown RBP3.47□□□□□ -1.85
USA1YML029W YRA1Q12159 226 aaKnown RBP3.47□□□□□ -1.85
USA1YML029W SCEIP03882 235 aa3.46□□□□□ -1.85
USA1YML029W MSW1P04803 379 aa3.46□□□□□ -1.85
USA1YML029W COX9P07255 59 aa3.46□□□□□ -1.85
USA1YML029W YHR035WP38769 630 aa3.46□□□□□ -1.85
USA1YML029W SLZ1P40167 298 aa3.46□□□□□ -1.85
USA1YML029W BNA6P43619 295 aa3.46□□□□□ -1.85
USA1YML029W CCC1P47818 322 aa3.46□□□□□ -1.85
USA1YML029W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.46□□□□□ -1.85not detected
USA1YML029W NUP116Q02630 1113 aa3.46□□□□□ -1.85
USA1YML029W RRP17Q04031 235 aaPredicted RBP3.46□□□□□ -1.85
USA1YML029W GAL83Q04739 417 aa3.46□□□□□ -1.85
USA1YML029W COX20Q04935 205 aa3.46□□□□□ -1.85
USA1YML029W RBD2Q12270 262 aa3.46□□□□□ -1.85
USA1YML029W SWM1Q12379 170 aa3.46□□□□□ -1.85
USA1YML029W MRP10O75012 95 aa3.46□□□□□ -1.86
USA1YML029W PAD1P33751 242 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
USA1YML029W YPK3P38070 525 aa3.46□□□□□ -1.86
USA1YML029W YEL057CP39983 233 aa3.46□□□□□ -1.86
USA1YML029W YFR054CP43622 192 aa3.46□□□□□ -1.86
USA1YML029W SLI1P53304 468 aa3.46□□□□□ -1.86
USA1YML029W MTM1P53320 366 aa3.46□□□□□ -1.86
USA1YML029W PGA1P53896 198 aa3.46□□□□□ -1.86
USA1YML029W MCM21Q06675 368 aa3.46□□□□□ -1.86
USA1YML029W RKM1Q08961 583 aaPredicted RBP3.46□□□□□ -1.86
USA1YML029W BAG7Q12128 409 aa3.46□□□□□ -1.86
USA1YML029W YAL064W-BO13512 126 aa3.45□□□□□ -1.86
USA1YML029W RAS1P01119 309 aa3.45□□□□□ -1.86
USA1YML029W ERG9P29704 444 aa3.45□□□□□ -1.86
USA1YML029W PRE2P30656 287 aaKnown RBP3.45□□□□□ -1.86
USA1YML029W VPS17P32913 551 aa3.45□□□□□ -1.86
USA1YML029W UTP11P34247 250 aaPredicted RBP3.45□□□□□ -1.86
USA1YML029W RPL6AQ02326 176 aaKnown RBP3.45□□□□□ -1.86
USA1YML029W YDR387CQ04162 555 aa3.45□□□□□ -1.86
USA1YML029W MIX14Q04341 121 aa3.45□□□□□ -1.86
USA1YML029W YLR352WQ06479 807 aa3.45□□□□□ -1.86
USA1YML029W YOL114CQ12322 202 aa3.45□□□□□ -1.86
USA1YML029W REP1P03871 373 aa3.45□□□□□ -1.86
USA1YML029W SSA3P09435 649 aaKnown RBP3.45□□□□□ -1.86
USA1YML029W NAM2P11325 894 aa3.45□□□□□ -1.86
USA1YML029W SEC66P33754 206 aa3.45□□□□□ -1.86
USA1YML029W SHE1P38200 338 aa3.45□□□□□ -1.86
USA1YML029W RFC4P40339 323 aaKnown RBP3.45□□□□□ -1.86
USA1YML029W YJL055WP47044 245 aa3.45□□□□□ -1.86
USA1YML029W MSY1P48527 492 aa3.45□□□□□ -1.86
USA1YML029W HNT2P49775 206 aa3.45□□□□□ -1.86
USA1YML029W YGL260WP53056 76 aa3.45□□□□□ -1.86
USA1YML029W YGR054WP53235 642 aaKnown RBP3.45□□□□□ -1.86
USA1YML029W YGR126WP53274 230 aa3.45□□□□□ -1.86
USA1YML029W RRN9P53437 365 aa3.45□□□□□ -1.86
USA1YML029W MAK3Q03503 176 aa3.45□□□□□ -1.86
USA1YML029W SSY1Q03770 852 aa3.45□□□□□ -1.86
USA1YML029W YDR514CQ04408 483 aa3.45□□□□□ -1.86
USA1YML029W YMR315WQ04869 349 aaKnown RBP3.45□□□□□ -1.86
USA1YML029W YLR173WQ06247 608 aa3.45□□□□□ -1.86
USA1YML029W MDM36Q06820 579 aa3.45□□□□□ -1.86
USA1YML029W MET32Q12041 191 aa3.45□□□□□ -1.86
USA1YML029W BTS1Q12051 335 aa3.45□□□□□ -1.86
USA1YML029W FRE6Q12473 712 aa3.45□□□□□ -1.86
USA1YML029W CLB2P24869 491 aa3.44□□□□□ -1.86
USA1YML029W YCL002CP25565 263 aa3.44□□□□□ -1.86
USA1YML029W FUN19P28003 413 aaPredicted RBP3.44□□□□□ -1.86
USA1YML029W MRPL16P38064 232 aa3.44□□□□□ -1.86
USA1YML029W CHS7P38843 316 aa3.44□□□□□ -1.86
USA1YML029W NVJ1P38881 321 aa3.44□□□□□ -1.86
USA1YML029W PCL6P40038 420 aa3.44□□□□□ -1.86
USA1YML029W JLP2P40206 208 aa3.44□□□□□ -1.86
USA1YML029W GIS1Q03833 894 aa3.44□□□□□ -1.86
USA1YML029W BNA7Q04066 261 aa3.44□□□□□ -1.86
USA1YML029W IPK1Q06667 281 aa3.44□□□□□ -1.86
USA1YML029W TSR2Q06672 205 aaKnown RBP3.44□□□□□ -1.86
USA1YML029W YDL114WQ07530 308 aa3.44□□□□□ -1.86
USA1YML029W MCH4Q08268 501 aa3.44□□□□□ -1.86
USA1YML029W YDL180WQ12301 547 aa3.44□□□□□ -1.86
USA1YML029W RPB8P20436 146 aa3.44□□□□□ -1.86
USA1YML029W FPS1P23900 669 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms