RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeast

Gene PBA1, Length 831 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBA1	YLR199C	CDH1	P53197	566 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	DIA1	P54005	336 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	RPM2	Q02773	1202 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	TRM82	Q03774	444 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	SEC13	Q04491	297 aa	Known RBP	2.99	□□□□□ -1.93
PBA1	YLR199C	PRM6	Q04705	352 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	SFH1	Q06168	426 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	TAZ1	Q06510	381 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	CDD1	Q06549	142 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	CTR3	Q06686	241 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	ABP140	Q08641	628 aa	Known RBP	2.99	□□□□□ -1.93
PBA1	YLR199C	SLM3	Q12093	417 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	TMS1	Q12116	473 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	RRP42	Q12277	265 aa	Predicted RBP	2.99	□□□□□ -1.93
PBA1	YLR199C	EAF3	Q12432	401 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	YPR064W	Q12492	139 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	VMR1	P38735	1592 aa		2.99	□□□□□ -1.93
PBA1	YLR199C	YRF1-2	P40105	1681 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	HTB1	P02293	131 aa	Known RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	HTB2	P02294	131 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	PIS1	P06197	220 aa	Known RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	NAM2	P11325	894 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	ERD1	P16151	362 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	NAM9	P27929	486 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	QRI5	P32344	111 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	SPS19	P32573	292 aa	Known RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	SPT4	P32914	102 aa	Predicted RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	SPO23	P33757	523 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	PMU1	P36069	295 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	SDS24	P38314	527 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	SOP4	P39543	234 aa	Predicted RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	SMB1	P40018	196 aa	Known RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	COX15	P40086	486 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	DIM1	P41819	318 aa	Known RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	CIN2	P46670	268 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	VHT1	P53241	593 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	NOP19	P53317	196 aa	Predicted RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	MTM1	P53320	366 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	GOR1	P53839	350 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	YNL040W	P53960	456 aa	Predicted RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	LOT6	Q07923	191 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	YDL109C	Q12103	647 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	FRE8	Q12209	686 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	YCL012C	Q8J0M4	134 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	SMC4	Q12267	1418 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	PDR5	P33302	1511 aa	Known RBP	2.98	□□□□□ -1.93
PBA1	YLR199C	PDR12	Q02785	1511 aa		2.98	□□□□□ -1.93
PBA1	YLR199C	YDR157W	A0A023PZE8	133 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	QCR7	P00128	127 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	RPP0	P05317	312 aa	Known RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	CTA1	P15202	515 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	CHA1	P25379	360 aa	Known RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	INO2	P26798	304 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
PBA1	YLR199C	TRS65	P32893	560 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	PDC2	P32896	925 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	NAT2	P37293	288 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	YBR241C	P38142	488 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	BMT2	P38278	337 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	MTC4	P38335	694 aa	Known RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	SEC72	P39742	193 aa	Known RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	YAT2	P40017	923 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	UTP18	P40362	594 aa	Predicted RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	YIL029C	P40538	142 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	YIL001W	P40560	513 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	LCB3	P47013	409 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	YJR079W	P47126	109 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	YPT32	P51996	222 aa	Known RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	GET1	P53192	235 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	PEX31	P53203	462 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	MAL13	P53338	473 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	IBD2	P53892	351 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	YNL095C	P53932	642 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	EBS1	Q03466	884 aa	Known RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	TDA1	Q03533	586 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	FAR8	Q05040	523 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	PLB3	Q08108	686 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	THP3	Q12049	470 aa	Known RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	PER33	Q12144	273 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	AYT1	Q12226	474 aa		2.97	□□□□□ -1.93
PBA1	YLR199C	SME1	Q12330	94 aa	Predicted RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	HTZ1	Q12692	134 aa	Known RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	NUP188	P52593	1655 aa	Known RBP	2.97	□□□□□ -1.93
PBA1	YLR199C	HEM4	P06174	275 aa		2.96	□□□□□ -1.94
PBA1	YLR199C	RPL20A	P0CX23	172 aa	Known RBP	2.96	□□□□□ -1.94
PBA1	YLR199C	RPL20B	P0CX24	172 aa	Predicted RBP	2.96	□□□□□ -1.94
PBA1	YLR199C	RPL23A	P0CX41	137 aa	Known RBP	2.96	□□□□□ -1.94
PBA1	YLR199C	RPL23B	P0CX42	137 aa	Known RBP	2.96	□□□□□ -1.94
PBA1	YLR199C	YFL068W	P0CX99	160 aa		2.96	□□□□□ -1.94
PBA1	YLR199C	YLL066W-A	P0CY00	160 aa		2.96	□□□□□ -1.94
PBA1	YLR199C	YLL067W-A	P0CY01	160 aa		2.96	□□□□□ -1.94
PBA1	YLR199C	ATR1	P13090	542 aa		2.96	□□□□□ -1.94
PBA1	YLR199C	RNA14	P25298	677 aa	Known RBP	2.96	□□□□□ -1.94
PBA1	YLR199C	YCR102C	P25608	368 aa		2.96	□□□□□ -1.94
PBA1	YLR199C	HOM6	P31116	359 aa	Known RBP	2.96	□□□□□ -1.94
PBA1	YLR199C	DEP1	P31385	405 aa		2.96	□□□□□ -1.94
PBA1	YLR199C	GDH2	P33327	1092 aa	Known RBP	2.96	□□□□□ -1.94
PBA1	YLR199C	KTI12	P34253	313 aa	Known RBP	2.96	□□□□□ -1.94
PBA1	YLR199C	ATG12	P38316	186 aa		2.96	□□□□□ -1.94
PBA1	YLR199C	MDV1	P47025	714 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms