RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C MGR3Q04472 501 aa2.4□□□□□ -2.03
RPF2YKR081C YDR286CQ05530 114 aa2.4□□□□□ -2.03
RPF2YKR081C YLL007CQ07799 665 aa2.4□□□□□ -2.03
RPF2YKR081C RAD7P06779 565 aa2.39□□□□□ -2.03
RPF2YKR081C VMA2P16140 517 aaKnown RBP2.39□□□□□ -2.03
RPF2YKR081C RPL5P26321 297 aaKnown RBP2.39□□□□□ -2.03
RPF2YKR081C AEP1P32493 518 aa2.39□□□□□ -2.03
RPF2YKR081C SWD2P36104 329 aaPredicted RBP2.39□□□□□ -2.03
RPF2YKR081C YPT32P51996 222 aaKnown RBP2.39□□□□□ -2.03
RPF2YKR081C SSU72P53538 206 aaPredicted RBP2.39□□□□□ -2.03
RPF2YKR081C SWT21P53873 357 aaPredicted RBP2.39□□□□□ -2.03
RPF2YKR081C ATG5Q12380 294 aa2.39□□□□□ -2.03
RPF2YKR081C CAR2P07991 424 aaKnown RBP2.38□□□□□ -2.03
RPF2YKR081C CDC40P40968 455 aaPredicted RBP2.38□□□□□ -2.03
RPF2YKR081C PIR5P46999 287 aa2.38□□□□□ -2.03
RPF2YKR081C LOH1P47055 219 aa2.38□□□□□ -2.03
RPF2YKR081C YJR141WP47172 347 aaPredicted RBP2.38□□□□□ -2.03
RPF2YKR081C TPN1P53099 579 aa2.38□□□□□ -2.03
RPF2YKR081C TAZ1Q06510 381 aa2.38□□□□□ -2.03
RPF2YKR081C SPL2P38839 148 aa2.37□□□□□ -2.03
RPF2YKR081C SUR2P38992 349 aa2.37□□□□□ -2.03
RPF2YKR081C OST3P48439 350 aa2.37□□□□□ -2.03
RPF2YKR081C RIB4P50861 169 aaPredicted RBP2.37□□□□□ -2.03
RPF2YKR081C YMR111CQ04461 462 aaPredicted RBP2.37□□□□□ -2.03
RPF2YKR081C PLB3Q08108 686 aa2.37□□□□□ -2.03
RPF2YKR081C YOR283WQ12040 230 aaKnown RBP2.37□□□□□ -2.03
RPF2YKR081C SIA1Q12212 622 aa2.37□□□□□ -2.03
RPF2YKR081C TPM1P17536 199 aaKnown RBP2.36□□□□□ -2.03
RPF2YKR081C SEN34P39707 275 aa2.36□□□□□ -2.03
RPF2YKR081C AVT7P40501 490 aa2.36□□□□□ -2.03
RPF2YKR081C DBP6P53734 629 aaKnown RBP2.36□□□□□ -2.03
RPF2YKR081C NUP157P40064 1391 aaKnown RBP2.36□□□□□ -2.03
RPF2YKR081C PAN1P32521 1480 aa2.35□□□□□ -2.03
RPF2YKR081C RPL26AP05743 127 aaKnown RBP2.35□□□□□ -2.03
RPF2YKR081C YKL063CP35725 167 aa2.35□□□□□ -2.03
RPF2YKR081C RPC37P36121 282 aa2.35□□□□□ -2.03
RPF2YKR081C PHO89P38361 574 aa2.35□□□□□ -2.03
RPF2YKR081C SHQ1P40486 507 aaPredicted RBP2.35□□□□□ -2.03
RPF2YKR081C RPE1P46969 238 aa2.35□□□□□ -2.03
RPF2YKR081C DSK2P48510 373 aa2.35□□□□□ -2.03
RPF2YKR081C COG7P53195 279 aa2.35□□□□□ -2.03
RPF2YKR081C RPL26BP53221 127 aaKnown RBP2.35□□□□□ -2.03
RPF2YKR081C YPL077CQ02831 240 aa2.35□□□□□ -2.03
RPF2YKR081C YML018CQ03730 393 aa2.35□□□□□ -2.03
RPF2YKR081C DPP1Q05521 289 aa2.35□□□□□ -2.03
RPF2YKR081C VPS68Q12016 184 aa2.35□□□□□ -2.03
RPF2YKR081C TY3A-GQ12173 290 aa2.35□□□□□ -2.03
RPF2YKR081C TY3A-IQ99219 290 aa2.35□□□□□ -2.03
RPF2YKR081C SAR1P20606 190 aaKnown RBP2.34□□□□□ -2.03
RPF2YKR081C TRX1P22217 103 aaKnown RBP2.34□□□□□ -2.03
RPF2YKR081C SUA5P32579 426 aa2.34□□□□□ -2.03
RPF2YKR081C COT1P32798 439 aa2.34□□□□□ -2.03
RPF2YKR081C GTO1P48239 356 aa2.34□□□□□ -2.03
RPF2YKR081C VOA1P53262 265 aa2.34□□□□□ -2.03
RPF2YKR081C PRO2P54885 456 aaKnown RBP2.34□□□□□ -2.03
RPF2YKR081C YOR114WQ12219 294 aa2.34□□□□□ -2.03
RPF2YKR081C AGC1Q12482 902 aa2.34□□□□□ -2.03
RPF2YKR081C TFS1P14306 219 aa2.33□□□□□ -2.04
RPF2YKR081C KRE6P32486 720 aa2.33□□□□□ -2.04
RPF2YKR081C CAT2P32796 670 aaKnown RBP2.33□□□□□ -2.04
RPF2YKR081C RPS0AP32905 252 aaKnown RBP2.33□□□□□ -2.04
RPF2YKR081C COY1P34237 679 aa2.33□□□□□ -2.04
RPF2YKR081C YMR209CQ03648 457 aa2.33□□□□□ -2.04
RPF2YKR081C CGI121Q03705 181 aaKnown RBP2.33□□□□□ -2.04
RPF2YKR081C MYO5Q04439 1219 aaKnown RBP2.33□□□□□ -2.04
RPF2YKR081C FCF1Q05498 189 aaPredicted RBP2.33□□□□□ -2.04
RPF2YKR081C RDS3Q06835 107 aaPredicted RBP2.33□□□□□ -2.04
RPF2YKR081C YPL150WQ12152 901 aa2.33□□□□□ -2.04
RPF2YKR081C ISD11Q6Q560 94 aa2.33□□□□□ -2.04
RPF2YKR081C ATP6P00854 259 aa2.32□□□□□ -2.04
RPF2YKR081C GCD2P12754 651 aaPredicted RBP2.32□□□□□ -2.04
RPF2YKR081C POP8P38208 133 aa2.32□□□□□ -2.04
RPF2YKR081C YDR089WP38966 869 aa2.32□□□□□ -2.04
RPF2YKR081C YIA6P40556 373 aa2.32□□□□□ -2.04
RPF2YKR081C RRG8Q06109 277 aa2.32□□□□□ -2.04
RPF2YKR081C ASR1Q06834 288 aa2.32□□□□□ -2.04
RPF2YKR081C ERG2P32352 222 aa2.31□□□□□ -2.04
RPF2YKR081C SPT4P32914 102 aaPredicted RBP2.31□□□□□ -2.04
RPF2YKR081C YHI9P38765 294 aa2.31□□□□□ -2.04
RPF2YKR081C NBP1P52919 319 aaPredicted RBP2.31□□□□□ -2.04
RPF2YKR081C ABZ2Q03266 374 aa2.31□□□□□ -2.04
RPF2YKR081C SPO77Q06134 477 aa2.31□□□□□ -2.04
RPF2YKR081C VAC14Q06708 880 aa2.31□□□□□ -2.04
RPF2YKR081C RTC5Q12108 567 aaKnown RBP2.31□□□□□ -2.04
RPF2YKR081C BEM2P39960 2167 aaKnown RBP2.31□□□□□ -2.04
RPF2YKR081C YEL009C-AA0A023PZF2 135 aa2.3□□□□□ -2.04
RPF2YKR081C DPM1P14020 267 aaKnown RBP2.3□□□□□ -2.04
RPF2YKR081C ATG15P25641 520 aa2.3□□□□□ -2.04
RPF2YKR081C GRH1Q04410 372 aaKnown RBP2.3□□□□□ -2.04
RPF2YKR081C TAF9Q05027 157 aa2.3□□□□□ -2.04
RPF2YKR081C CTS2Q06350 511 aa2.3□□□□□ -2.04
RPF2YKR081C SUE1Q06524 206 aa2.3□□□□□ -2.04
RPF2YKR081C BMH1P29311 267 aaKnown RBP2.29□□□□□ -2.04
RPF2YKR081C RPC25P35718 212 aa2.29□□□□□ -2.04
RPF2YKR081C TDA11P38854 504 aa2.29□□□□□ -2.04
RPF2YKR081C POP2P39008 433 aa2.29□□□□□ -2.04
RPF2YKR081C YJR146WP47174 117 aa2.29□□□□□ -2.04
RPF2YKR081C KEL2P50090 882 aa2.29□□□□□ -2.04
RPF2YKR081C YMR166CQ03829 368 aa2.29□□□□□ -2.04
RPF2YKR081C CUR1Q06469 252 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 122.4 ms