RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM2	YKR056W	FUS2	Q05670	677 aa		2.25	□□□□□ -2.05
TRM2	YKR056W	YOR376W	Q08900	122 aa		2.25	□□□□□ -2.05
TRM2	YKR056W	SRO7	Q12038	1033 aa		2.25	□□□□□ -2.05
TRM2	YKR056W	ATP16	Q12165	160 aa		2.25	□□□□□ -2.05
TRM2	YKR056W	QCR7	P00128	127 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	CBS2	P14905	389 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	ERD1	P16151	362 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	RNA15	P25299	296 aa	Predicted RBP	2.24	□□□□□ -2.05
TRM2	YKR056W	SPS19	P32573	292 aa	Known RBP	2.24	□□□□□ -2.05
TRM2	YKR056W	CSE2	P33308	149 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	NTF2	P33331	125 aa	Known RBP	2.24	□□□□□ -2.05
TRM2	YKR056W	ASK1	P35734	292 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	JEN1	P36035	616 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	YKL075C	P36083	450 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	YIL067C	P40514	678 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	YRB1	P41920	201 aa	Known RBP	2.24	□□□□□ -2.05
TRM2	YKR056W	AIM23	P47015	356 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	YJR012C	P47087	207 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	SHY1	P53266	389 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	YMR114C	Q04471	368 aa	Known RBP	2.24	□□□□□ -2.05
TRM2	YKR056W	CTR3	Q06686	241 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	ABP140	Q08641	628 aa	Known RBP	2.24	□□□□□ -2.05
TRM2	YKR056W	SRL1	Q08673	210 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	HNT3	Q08702	217 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	YRA1	Q12159	226 aa	Known RBP	2.24	□□□□□ -2.05
TRM2	YKR056W	LAG2	Q92325	660 aa		2.24	□□□□□ -2.05
TRM2	YKR056W	MSI1	P13712	422 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	CPR4	P25334	318 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	GIT1	P25346	518 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	INO2	P26798	304 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	MBA1	P38300	278 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	PCI8	P40512	444 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	EGT2	P42835	1041 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	MOB2	P43563	287 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	VAC7	P53950	1165 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	PRP38	Q00723	242 aa	Predicted RBP	2.23	□□□□□ -2.05
TRM2	YKR056W	PRM6	Q04705	352 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	YMR226C	Q05016	267 aa	Known RBP	2.23	□□□□□ -2.05
TRM2	YKR056W	FAR8	Q05040	523 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	DPP1	Q05521	289 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	SNA4	Q07549	140 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	PLB3	Q08108	686 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	YCT1	Q12235	531 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	FOL3	Q12676	427 aa	Predicted RBP	2.23	□□□□□ -2.05
TRM2	YKR056W	BI3	Q9ZZW7	517 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	RPL35A	P0CX84	120 aa	Known RBP	2.23	□□□□□ -2.05
TRM2	YKR056W	RPL35B	P0CX85	120 aa	Known RBP	2.23	□□□□□ -2.05
TRM2	YKR056W	YCR025C	P25352	136 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	ATG15	P25641	520 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	DEP1	P31385	405 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	KTI12	P34253	313 aa	Known RBP	2.23	□□□□□ -2.05
TRM2	YKR056W	MGA1	P53050	456 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	ALG13	P53178	202 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	YNR066C	P53752	436 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	TPS1	Q00764	495 aa	Known RBP	2.23	□□□□□ -2.05
TRM2	YKR056W	YDR209C	Q03480	137 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	GMC1	Q04399	608 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	RIF2	Q06208	395 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	MHR1	Q06630	226 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	COQ10	Q08058	207 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	SFM1	Q12314	213 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	YCL021W-A	Q96VH3	125 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	YPL229W	Q99395	206 aa		2.23	□□□□□ -2.05
TRM2	YKR056W	CTA1	P15202	515 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	MRPL20	P22354	195 aa	Predicted RBP	2.22	□□□□□ -2.05
TRM2	YKR056W	ATP7	P30902	174 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	AEP1	P32493	518 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	PRX1	P34227	261 aa	Known RBP	2.22	□□□□□ -2.05
TRM2	YKR056W	YHB1	P39676	399 aa	Known RBP	2.22	□□□□□ -2.05
TRM2	YKR056W	ATG18	P43601	500 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	YFR057W	P43625	151 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	YJR054W	P47114	497 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	EFM5	P53200	248 aa	Known RBP	2.22	□□□□□ -2.05
TRM2	YKR056W	CRH1	P53301	507 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	SCW4	P53334	386 aa	Known RBP	2.22	□□□□□ -2.05
TRM2	YKR056W	CWC25	P53854	179 aa	Known RBP	2.22	□□□□□ -2.05
TRM2	YKR056W	ADD37	Q03233	198 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	UTP15	Q04305	513 aa	Known RBP	2.22	□□□□□ -2.05
TRM2	YKR056W	GAS2	Q06135	555 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	YOR292C	Q08743	309 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	PER33	Q12144	273 aa		2.22	□□□□□ -2.05
TRM2	YKR056W	RRP42	Q12277	265 aa	Predicted RBP	2.22	□□□□□ -2.05
TRM2	YKR056W	HTB1	P02293	131 aa	Known RBP	2.21	□□□□□ -2.06
TRM2	YKR056W	HTB2	P02294	131 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	RPL27A	P0C2H6	136 aa	Known RBP	2.21	□□□□□ -2.06
TRM2	YKR056W	RPL27B	P0C2H7	136 aa	Known RBP	2.21	□□□□□ -2.06
TRM2	YKR056W	PHO80	P20052	293 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	CDC50	P25656	391 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	GOS1	P38736	223 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	IKI1	P38874	309 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	MAM33	P40513	266 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	YIA6	P40556	373 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	YJL213W	P40896	331 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	HAC1	P41546	238 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	YJR149W	P47177	404 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	USE1	P53146	245 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	SDC1	Q03323	175 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	SEC10	Q06245	871 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	MMT2	Q08970	484 aa		2.21	□□□□□ -2.06
TRM2	YKR056W	ERV2	Q12284	196 aa		2.21	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms