RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C YKL162CP36052 402 aa1.49□□□□□ -2.17
NUP120YKL057C MEP1P40260 492 aa1.49□□□□□ -2.17
NUP120YKL057C ABM1P47146 123 aa1.49□□□□□ -2.17
NUP120YKL057C MIX17Q03667 156 aa1.49□□□□□ -2.17
NUP120YKL057C SFH1Q06168 426 aa1.49□□□□□ -2.17
NUP120YKL057C PEX30Q06169 523 aa1.49□□□□□ -2.17
NUP120YKL057C SPT8P38915 602 aa1.48□□□□□ -2.17
NUP120YKL057C AVT7P40501 490 aa1.48□□□□□ -2.17
NUP120YKL057C RMI1Q02685 241 aa1.48□□□□□ -2.17
NUP120YKL057C YML018CQ03730 393 aa1.48□□□□□ -2.17
NUP120YKL057C DAL82P21705 255 aa1.48□□□□□ -2.17
NUP120YKL057C RPC37P36121 282 aa1.48□□□□□ -2.17
NUP120YKL057C GTO1P48239 356 aa1.48□□□□□ -2.17
NUP120YKL057C SSQ1Q05931 657 aaPredicted RBP1.48□□□□□ -2.17
NUP120YKL057C TLG2Q08144 397 aa1.48□□□□□ -2.17
NUP120YKL057C FDH1Q08911 376 aa1.48□□□□□ -2.17
NUP120YKL057C AIM45Q12480 344 aaKnown RBP1.48□□□□□ -2.17
NUP120YKL057C MET2P08465 486 aa1.47□□□□□ -2.17
NUP120YKL057C FAR1P21268 830 aa1.47□□□□□ -2.17
NUP120YKL057C YCR016WP25617 290 aaKnown RBP1.47□□□□□ -2.17
NUP120YKL057C VMA11P32842 164 aa1.47□□□□□ -2.17
NUP120YKL057C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
NUP120YKL057C YBL081WP38180 368 aaKnown RBP1.47□□□□□ -2.17
NUP120YKL057C SHE1P38200 338 aa1.47□□□□□ -2.17
NUP120YKL057C PET8P38921 284 aa1.47□□□□□ -2.17
NUP120YKL057C SYF2P53277 215 aaPredicted RBP1.47□□□□□ -2.17
NUP120YKL057C ATG17Q06410 417 aa1.47□□□□□ -2.17
NUP120YKL057C TAF10Q12030 206 aa1.47□□□□□ -2.17
NUP120YKL057C TY3A-GQ12173 290 aa1.47□□□□□ -2.17
NUP120YKL057C YBL008W-AQ3E821 79 aa1.47□□□□□ -2.17
NUP120YKL057C TY3A-IQ99219 290 aa1.47□□□□□ -2.17
NUP120YKL057C EBP2P36049 427 aaKnown RBP1.47□□□□□ -2.17
NUP120YKL057C MRPL3P36516 390 aa1.47□□□□□ -2.17
NUP120YKL057C YMR144WP40214 342 aaKnown RBP1.47□□□□□ -2.17
NUP120YKL057C YNR066CP53752 436 aa1.47□□□□□ -2.17
NUP120YKL057C YDL144CQ07589 356 aa1.47□□□□□ -2.17
NUP120YKL057C YOR376WQ08900 122 aa1.47□□□□□ -2.17
NUP120YKL057C RPN6Q12377 434 aa1.47□□□□□ -2.17
NUP120YKL057C AI5_BETAQ9ZZX0 354 aa1.47□□□□□ -2.17
NUP120YKL057C ADH1P00330 348 aaKnown RBP1.46□□□□□ -2.17
NUP120YKL057C TFS1P14306 219 aa1.46□□□□□ -2.17
NUP120YKL057C CUP2P15315 225 aa1.46□□□□□ -2.17
NUP120YKL057C OM45P16547 393 aa1.46□□□□□ -2.17
NUP120YKL057C SHE3P38272 425 aaKnown RBP1.46□□□□□ -2.17
NUP120YKL057C FZO1P38297 855 aa1.46□□□□□ -2.17
NUP120YKL057C COX15P40086 486 aa1.46□□□□□ -2.17
NUP120YKL057C YMD8Q03697 442 aa1.46□□□□□ -2.17
NUP120YKL057C YPR063CQ12160 140 aa1.46□□□□□ -2.17
NUP120YKL057C TDH1P00360 332 aaKnown RBP1.46□□□□□ -2.18
NUP120YKL057C MRPL27P36526 146 aaPredicted RBP1.46□□□□□ -2.18
NUP120YKL057C PEX32P38292 413 aa1.46□□□□□ -2.18
NUP120YKL057C RCK2P38623 610 aa1.46□□□□□ -2.18
NUP120YKL057C DED81P38707 554 aaKnown RBP1.46□□□□□ -2.18
NUP120YKL057C SOP4P39543 234 aaPredicted RBP1.46□□□□□ -2.18
NUP120YKL057C YAR068WP39564 161 aa1.46□□□□□ -2.18
NUP120YKL057C PFS2P42841 465 aaKnown RBP1.46□□□□□ -2.18
NUP120YKL057C MAL13P53338 473 aa1.46□□□□□ -2.18
NUP120YKL057C RRP40Q08285 240 aaKnown RBP1.46□□□□□ -2.18
NUP120YKL057C RPL28P02406 149 aaKnown RBP1.46□□□□□ -2.18
NUP120YKL057C ADH3P07246 375 aaKnown RBP1.46□□□□□ -2.18
NUP120YKL057C RPL31AP0C2H8 113 aaKnown RBP1.46□□□□□ -2.18
NUP120YKL057C YKL070WP36087 169 aa1.46□□□□□ -2.18
NUP120YKL057C YHR045WP38775 560 aa1.46□□□□□ -2.18
NUP120YKL057C OKP1P53298 406 aa1.46□□□□□ -2.18
NUP120YKL057C SPO19Q03029 223 aa1.46□□□□□ -2.18
NUP120YKL057C VPS20Q04272 221 aa1.46□□□□□ -2.18
NUP120YKL057C SPO77Q06134 477 aa1.46□□□□□ -2.18
NUP120YKL057C YPS3Q12303 508 aa1.46□□□□□ -2.18
NUP120YKL057C RNA15P25299 296 aaPredicted RBP1.45□□□□□ -2.18
NUP120YKL057C SUA5P32579 426 aa1.45□□□□□ -2.18
NUP120YKL057C TRR2P38816 342 aa1.45□□□□□ -2.18
NUP120YKL057C INA22P40576 216 aa1.45□□□□□ -2.18
NUP120YKL057C BIO4P53630 237 aa1.45□□□□□ -2.18
NUP120YKL057C SUR7P54003 302 aa1.45□□□□□ -2.18
NUP120YKL057C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
NUP120YKL057C YPL113CQ02961 396 aa1.45□□□□□ -2.18
NUP120YKL057C VPS60Q03390 229 aa1.45□□□□□ -2.18
NUP120YKL057C EBS1Q03466 884 aaKnown RBP1.45□□□□□ -2.18
NUP120YKL057C SEC13Q04491 297 aaKnown RBP1.45□□□□□ -2.18
NUP120YKL057C PRM4Q12498 284 aa1.45□□□□□ -2.18
NUP120YKL057C MHT1Q12525 324 aa1.45□□□□□ -2.18
NUP120YKL057C VPS3P23643 1011 aa1.45□□□□□ -2.18
NUP120YKL057C BMH1P29311 267 aaKnown RBP1.45□□□□□ -2.18
NUP120YKL057C DBP7P36120 742 aaKnown RBP1.45□□□□□ -2.18
NUP120YKL057C RPL10P41805 221 aaKnown RBP1.45□□□□□ -2.18
NUP120YKL057C NSA1P53136 463 aaPredicted RBP1.45□□□□□ -2.18
NUP120YKL057C SEC10Q06245 871 aa1.45□□□□□ -2.18
NUP120YKL057C YOL019WQ08157 551 aa1.45□□□□□ -2.18
NUP120YKL057C BSC6Q08280 497 aa1.45□□□□□ -2.18
NUP120YKL057C YKL187CP34231 750 aa1.44□□□□□ -2.18
NUP120YKL057C YHR122WP38829 231 aa1.44□□□□□ -2.18
NUP120YKL057C YFL064CP43540 174 aa1.44□□□□□ -2.18
NUP120YKL057C RRN5Q02983 363 aa1.44□□□□□ -2.18
NUP120YKL057C YLR446WQ06204 433 aa1.44□□□□□ -2.18
NUP120YKL057C HEM25Q07534 307 aa1.44□□□□□ -2.18
NUP120YKL057C ISD11Q6Q560 94 aa1.44□□□□□ -2.18
NUP120YKL057C HSM3P38348 480 aa1.44□□□□□ -2.18
NUP120YKL057C NBP1P52919 319 aaPredicted RBP1.44□□□□□ -2.18
NUP120YKL057C YNL040WP53960 456 aaPredicted RBP1.44□□□□□ -2.18
NUP120YKL057C SGT2Q12118 346 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms