RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W YGL114WP53134 725 aa2.29□□□□□ -2.04
SEC28YIL076W CUE3P53137 624 aaKnown RBP2.29□□□□□ -2.04
SEC28YIL076W YNL095CP53932 642 aa2.29□□□□□ -2.04
SEC28YIL076W RVB1Q03940 463 aaKnown RBP2.29□□□□□ -2.04
SEC28YIL076W SEC13Q04491 297 aaKnown RBP2.29□□□□□ -2.04
SEC28YIL076W BUR2Q05949 395 aa2.29□□□□□ -2.04
SEC28YIL076W YOR292CQ08743 309 aa2.29□□□□□ -2.04
SEC28YIL076W VIK1Q12045 647 aa2.29□□□□□ -2.04
SEC28YIL076W YER188WP40103 239 aa2.28□□□□□ -2.04
SEC28YIL076W UBX2Q04228 584 aa2.28□□□□□ -2.04
SEC28YIL076W VMA5P31412 392 aaKnown RBP2.27□□□□□ -2.05
SEC28YIL076W AIM29P36154 155 aa2.27□□□□□ -2.05
SEC28YIL076W SYF2P53277 215 aaPredicted RBP2.27□□□□□ -2.05
SEC28YIL076W NFI1Q12216 726 aa2.27□□□□□ -2.05
SEC28YIL076W TY1B-NL2Q99337 1749 aaKnown RBP2.27□□□□□ -2.05
SEC28YIL076W TAL1P15019 335 aaKnown RBP2.26□□□□□ -2.05
SEC28YIL076W POT1P27796 417 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
SEC28YIL076W ACB1P31787 87 aa2.26□□□□□ -2.05
SEC28YIL076W VPH2P32341 215 aa2.26□□□□□ -2.05
SEC28YIL076W GPX1P36014 167 aa2.26□□□□□ -2.05
SEC28YIL076W SIF2P38262 535 aa2.26□□□□□ -2.05
SEC28YIL076W YHL044WP38727 235 aa2.26□□□□□ -2.05
SEC28YIL076W SOP4P39543 234 aaPredicted RBP2.26□□□□□ -2.05
SEC28YIL076W MNN5P46982 586 aa2.26□□□□□ -2.05
SEC28YIL076W RCF1Q03713 159 aa2.26□□□□□ -2.05
SEC28YIL076W PML1Q07930 204 aaPredicted RBP2.26□□□□□ -2.05
SEC28YIL076W YDR262WQ12331 272 aa2.26□□□□□ -2.05
SEC28YIL076W YAL063C-AQ3E791 96 aa2.26□□□□□ -2.05
SEC28YIL076W NUP188P52593 1655 aaKnown RBP2.25□□□□□ -2.05
SEC28YIL076W IML1P47170 1584 aa2.25□□□□□ -2.05
SEC28YIL076W OSH6Q02201 448 aa2.25□□□□□ -2.05
SEC28YIL076W ARC18Q05933 178 aaKnown RBP2.25□□□□□ -2.05
SEC28YIL076W SRB8P25648 1427 aa2.25□□□□□ -2.05
SEC28YIL076W VMR1P38735 1592 aa2.24□□□□□ -2.05
SEC28YIL076W YFL040WP43562 540 aa2.24□□□□□ -2.05
SEC28YIL076W YGR168CP53293 376 aa2.24□□□□□ -2.05
SEC28YIL076W LAG2Q92325 660 aa2.24□□□□□ -2.05
SEC28YIL076W VPS1P21576 704 aaKnown RBP2.23□□□□□ -2.05
SEC28YIL076W MRPL6P32904 214 aa2.23□□□□□ -2.05
SEC28YIL076W YBR062CP38239 180 aa2.23□□□□□ -2.05
SEC28YIL076W YIL012WP40551 113 aa2.23□□□□□ -2.05
SEC28YIL076W YGR016WP53209 190 aa2.23□□□□□ -2.05
SEC28YIL076W YPL278CQ08990 100 aa2.23□□□□□ -2.05
SEC28YIL076W CAB3P36076 571 aa2.22□□□□□ -2.05
SEC28YIL076W IRC4Q03036 179 aa2.22□□□□□ -2.05
SEC28YIL076W SNX41Q04053 625 aa2.22□□□□□ -2.05
SEC28YIL076W TIM22Q12328 207 aa2.22□□□□□ -2.05
SEC28YIL076W PFK27Q12471 397 aaPredicted RBP2.22□□□□□ -2.05
SEC28YIL076W PDR5P33302 1511 aaKnown RBP2.22□□□□□ -2.05
SEC28YIL076W YCR025CP25352 136 aa2.21□□□□□ -2.06
SEC28YIL076W PES4P39684 611 aa2.21□□□□□ -2.06
SEC28YIL076W PDR11P40550 1411 aa2.21□□□□□ -2.06
SEC28YIL076W PDR16P53860 351 aaKnown RBP2.21□□□□□ -2.06
SEC28YIL076W CFT1Q06632 1357 aaKnown RBP2.21□□□□□ -2.06
SEC28YIL076W CDC13P32797 924 aaKnown RBP2.2□□□□□ -2.06
SEC28YIL076W SYS1P41544 203 aa2.2□□□□□ -2.06
SEC28YIL076W YFL064CP43540 174 aa2.2□□□□□ -2.06
SEC28YIL076W MIG2P53035 382 aa2.2□□□□□ -2.06
SEC28YIL076W LIF1P53150 421 aa2.2□□□□□ -2.06
SEC28YIL076W SSU72P53538 206 aaPredicted RBP2.2□□□□□ -2.06
SEC28YIL076W PRR2Q12310 699 aa2.2□□□□□ -2.06
SEC28YIL076W UTP23Q12339 254 aaKnown RBP2.2□□□□□ -2.06
SEC28YIL076W RNR2P09938 399 aaKnown RBP2.19□□□□□ -2.06
SEC28YIL076W LIN1P38852 340 aaPredicted RBP2.19□□□□□ -2.06
SEC28YIL076W ALG9P53868 555 aaKnown RBP2.19□□□□□ -2.06
SEC28YIL076W DCP1Q12517 231 aaPredicted RBP2.19□□□□□ -2.06
SEC28YIL076W BCK1Q01389 1478 aa2.19□□□□□ -2.06
SEC28YIL076W RPL18AP0CX49 186 aaKnown RBP2.18□□□□□ -2.06
SEC28YIL076W RPL18BP0CX50 186 aaKnown RBP2.18□□□□□ -2.06
SEC28YIL076W YEL043WP32618 956 aa2.18□□□□□ -2.06
SEC28YIL076W ZRT1P32804 376 aa2.18□□□□□ -2.06
SEC28YIL076W YHR035WP38769 630 aa2.18□□□□□ -2.06
SEC28YIL076W INA22P40576 216 aa2.18□□□□□ -2.06
SEC28YIL076W PIR5P46999 287 aa2.18□□□□□ -2.06
SEC28YIL076W PRP24P49960 444 aaKnown RBP2.18□□□□□ -2.06
SEC28YIL076W YLR446WQ06204 433 aa2.18□□□□□ -2.06
SEC28YIL076W PSY3Q12318 242 aa2.18□□□□□ -2.06
SEC28YIL076W KRE5P22023 1365 aa2.18□□□□□ -2.06
SEC28YIL076W MCH2P36032 473 aa2.17□□□□□ -2.06
SEC28YIL076W YKL162CP36052 402 aa2.17□□□□□ -2.06
SEC28YIL076W PLB3Q08108 686 aa2.17□□□□□ -2.06
SEC28YIL076W HIS3P06633 220 aa2.16□□□□□ -2.06
SEC28YIL076W ZWF1P11412 505 aaKnown RBP2.16□□□□□ -2.06
SEC28YIL076W IFM1P25038 676 aa2.16□□□□□ -2.06
SEC28YIL076W IMP1P28627 190 aa2.16□□□□□ -2.06
SEC28YIL076W TPO5P36029 618 aa2.16□□□□□ -2.06
SEC28YIL076W MRPL3P36516 390 aa2.16□□□□□ -2.06
SEC28YIL076W NBP1P52919 319 aaPredicted RBP2.16□□□□□ -2.06
SEC28YIL076W RSM27P53305 110 aa2.16□□□□□ -2.06
SEC28YIL076W YGR266WP53326 701 aa2.16□□□□□ -2.06
SEC28YIL076W NNT1Q05874 261 aa2.16□□□□□ -2.06
SEC28YIL076W GAL3P13045 520 aa2.15□□□□□ -2.07
SEC28YIL076W PHO80P20052 293 aa2.15□□□□□ -2.07
SEC28YIL076W GCG1P32656 232 aaKnown RBP2.15□□□□□ -2.07
SEC28YIL076W YPC1P38298 316 aa2.15□□□□□ -2.07
SEC28YIL076W DSK2P48510 373 aa2.15□□□□□ -2.07
SEC28YIL076W OKP1P53298 406 aa2.15□□□□□ -2.07
SEC28YIL076W RDS3Q06835 107 aaPredicted RBP2.15□□□□□ -2.07
SEC28YIL076W GCN2P15442 1659 aa2.15□□□□□ -2.07
SEC28YIL076W CLB6P32943 380 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 482.6 ms