RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W GAS3Q03655 524 aa3.03□□□□□ -1.92
USE1YGL098W PLB2Q03674 706 aa3.03□□□□□ -1.92
USE1YGL098W EKI1Q03764 534 aa3.03□□□□□ -1.92
USE1YGL098W YAP6Q03935 383 aa3.03□□□□□ -1.92
USE1YGL098W AIM32Q04689 311 aa3.03□□□□□ -1.92
USE1YGL098W PEX30Q06169 523 aa3.03□□□□□ -1.92
USE1YGL098W NUT2Q06213 157 aa3.03□□□□□ -1.92
USE1YGL098W ATG10Q07879 167 aa3.03□□□□□ -1.92
USE1YGL098W LDB18Q07887 179 aa3.03□□□□□ -1.92
USE1YGL098W HRD1Q08109 551 aa3.03□□□□□ -1.92
USE1YGL098W YDR056CQ12025 205 aa3.03□□□□□ -1.92
USE1YGL098W FCF2Q12035 217 aaPredicted RBP3.03□□□□□ -1.92
USE1YGL098W NBP2Q12163 236 aa3.03□□□□□ -1.92
USE1YGL098W YOL114CQ12322 202 aa3.03□□□□□ -1.92
USE1YGL098W YNR034W-AQ3E841 98 aa3.03□□□□□ -1.92
USE1YGL098W YIL134C-AQ45U18 67 aa3.03□□□□□ -1.92
USE1YGL098W FSH3Q99369 266 aa3.03□□□□□ -1.92
USE1YGL098W PET20Q99373 253 aa3.03□□□□□ -1.92
USE1YGL098W YIL177CP40434 1758 aa3.02□□□□□ -1.93
USE1YGL098W YJL225CP40889 1758 aa3.02□□□□□ -1.93
USE1YGL098W YOR304C-AO14468 76 aa3.02□□□□□ -1.93
USE1YGL098W RAS2P01120 322 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W UBI4P0CG63 381 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W RPL40AP0CH08 128 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W RPL40BP0CH09 128 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W AMD1P15274 810 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W CDC42P19073 191 aa3.02□□□□□ -1.93
USE1YGL098W RPI1P23250 407 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W RER1P25560 188 aa3.02□□□□□ -1.93
USE1YGL098W STP22P25604 385 aa3.02□□□□□ -1.93
USE1YGL098W GAC1P28006 793 aa3.02□□□□□ -1.93
USE1YGL098W PEX4P29340 183 aa3.02□□□□□ -1.93
USE1YGL098W SUA5P32579 426 aa3.02□□□□□ -1.93
USE1YGL098W YEF1P32622 495 aa3.02□□□□□ -1.93
USE1YGL098W MSN4P33749 630 aa3.02□□□□□ -1.93
USE1YGL098W TIP20P33891 701 aa3.02□□□□□ -1.93
USE1YGL098W ADD66P36040 267 aa3.02□□□□□ -1.93
USE1YGL098W VBA5P36172 582 aa3.02□□□□□ -1.93
USE1YGL098W ASC1P38011 319 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W YMC2P38087 329 aa3.02□□□□□ -1.93
USE1YGL098W FAT1P38225 669 aa3.02□□□□□ -1.93
USE1YGL098W YBR220CP38318 560 aa3.02□□□□□ -1.93
USE1YGL098W SRP68P38687 599 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W HTD2P38790 280 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W SFB3P38810 929 aa3.02□□□□□ -1.93
USE1YGL098W NDT80P38830 627 aa3.02□□□□□ -1.93
USE1YGL098W IRC22P40006 225 aa3.02□□□□□ -1.93
USE1YGL098W PRE6P40303 254 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W NIT1P40447 199 aa3.02□□□□□ -1.93
USE1YGL098W GAB1P41733 394 aa3.02□□□□□ -1.93
USE1YGL098W PFS2P42841 465 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W DLD2P46681 530 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W GWT1P47026 490 aa3.02□□□□□ -1.93
USE1YGL098W MNN10P50108 393 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W MGA1P53050 456 aa3.02□□□□□ -1.93
USE1YGL098W TAM41P53230 385 aa3.02□□□□□ -1.93
USE1YGL098W MEP3P53390 489 aa3.02□□□□□ -1.93
USE1YGL098W YNR066CP53752 436 aa3.02□□□□□ -1.93
USE1YGL098W IBD2P53892 351 aa3.02□□□□□ -1.93
USE1YGL098W AAH1P53909 347 aa3.02□□□□□ -1.93
USE1YGL098W AAT1Q01802 451 aa3.02□□□□□ -1.93
USE1YGL098W YPL014WQ02606 381 aa3.02□□□□□ -1.93
USE1YGL098W NUP100Q02629 959 aa3.02□□□□□ -1.93
USE1YGL098W SKY1Q03656 742 aa3.02□□□□□ -1.93
USE1YGL098W SHH3Q04487 196 aa3.02□□□□□ -1.93
USE1YGL098W SSL1Q04673 461 aaPredicted RBP3.02□□□□□ -1.93
USE1YGL098W ARG7Q04728 441 aa3.02□□□□□ -1.93
USE1YGL098W AVO2Q04749 426 aa3.02□□□□□ -1.93
USE1YGL098W YDR286CQ05530 114 aa3.02□□□□□ -1.93
USE1YGL098W YLR225CQ05948 407 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W CNL1Q06333 122 aa3.02□□□□□ -1.93
USE1YGL098W CTS2Q06350 511 aa3.02□□□□□ -1.93
USE1YGL098W PIN3Q06449 215 aa3.02□□□□□ -1.93
USE1YGL098W BER1Q06688 274 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W SWC7Q06707 132 aa3.02□□□□□ -1.93
USE1YGL098W HEM25Q07534 307 aa3.02□□□□□ -1.93
USE1YGL098W BTS1Q12051 335 aa3.02□□□□□ -1.93
USE1YGL098W LEU9Q12166 604 aaKnown RBP3.02□□□□□ -1.93
USE1YGL098W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
USE1YGL098W JLP1Q12358 412 aa3.02□□□□□ -1.93
USE1YGL098W YPL247CQ12523 523 aa3.02□□□□□ -1.93
USE1YGL098W SLO1Q3E784 85 aa3.02□□□□□ -1.93
USE1YGL098W IZH4Q99393 312 aa3.02□□□□□ -1.93
USE1YGL098W DDI2P0CH63 225 aa3.01□□□□□ -1.93
USE1YGL098W DDI3P0CH64 225 aa3.01□□□□□ -1.93
USE1YGL098W UNG1P12887 359 aa3.01□□□□□ -1.93
USE1YGL098W HSP26P15992 214 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
USE1YGL098W ANB1P19211 157 aa3.01□□□□□ -1.93
USE1YGL098W SRM1P21827 482 aa3.01□□□□□ -1.93
USE1YGL098W SEC22P22214 214 aa3.01□□□□□ -1.93
USE1YGL098W PRE8P23639 250 aa3.01□□□□□ -1.93
USE1YGL098W SLM5P25345 492 aaKnown RBP3.01□□□□□ -1.93
USE1YGL098W LSB5P25369 354 aa3.01□□□□□ -1.93
USE1YGL098W YIH1P25637 258 aa3.01□□□□□ -1.93
USE1YGL098W ATG15P25641 520 aa3.01□□□□□ -1.93
USE1YGL098W ARO2P28777 376 aaKnown RBP3.01□□□□□ -1.93
USE1YGL098W PMI40P29952 429 aaKnown RBP3.01□□□□□ -1.93
USE1YGL098W PRE4P30657 266 aa3.01□□□□□ -1.93
USE1YGL098W AAR2P32357 355 aaPredicted RBP3.01□□□□□ -1.93
USE1YGL098W SKT5P34226 696 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms