RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeastyeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA2YDR295C YIL152WP40455 235 aa3.1□□□□□ -1.91
HDA2YDR295C GDS1P41913 522 aa3.1□□□□□ -1.91
HDA2YDR295C YJR111CP47148 283 aaKnown RBP3.1□□□□□ -1.91
HDA2YDR295C NUP57P48837 541 aa3.1□□□□□ -1.91
HDA2YDR295C MST27P53176 234 aa3.1□□□□□ -1.91
HDA2YDR295C MTM1P53320 366 aa3.1□□□□□ -1.91
HDA2YDR295C MAL13P53338 473 aa3.1□□□□□ -1.91
HDA2YDR295C IBD2P53892 351 aa3.1□□□□□ -1.91
HDA2YDR295C YMR166CQ03829 368 aa3.1□□□□□ -1.91
HDA2YDR295C SSK1Q07084 712 aa3.1□□□□□ -1.91
HDA2YDR295C GAT3Q07928 141 aa3.1□□□□□ -1.91
HDA2YDR295C YOL019WQ08157 551 aa3.1□□□□□ -1.91
HDA2YDR295C RPN8Q08723 338 aaKnown RBP3.1□□□□□ -1.91
HDA2YDR295C SRL2Q12020 392 aa3.1□□□□□ -1.91
HDA2YDR295C RAD50P12753 1312 aa3.1□□□□□ -1.91
HDA2YDR295C RPS28BP0C0X0 67 aaKnown RBP3.1□□□□□ -1.91
HDA2YDR295C PMT2P31382 759 aa3.1□□□□□ -1.91
HDA2YDR295C SGE1P33335 543 aa3.1□□□□□ -1.91
HDA2YDR295C UPS2P35200 230 aa3.1□□□□□ -1.91
HDA2YDR295C MCR1P36060 302 aaKnown RBP3.1□□□□□ -1.91
HDA2YDR295C YKL075CP36083 450 aa3.1□□□□□ -1.91
HDA2YDR295C YCR087C-AP37263 153 aa3.1□□□□□ -1.91
HDA2YDR295C YBR096WP38256 230 aa3.1□□□□□ -1.91
HDA2YDR295C GOS1P38736 223 aa3.1□□□□□ -1.91
HDA2YDR295C MRPL49P40858 161 aaPredicted RBP3.1□□□□□ -1.91
HDA2YDR295C MDV1P47025 714 aa3.1□□□□□ -1.91
HDA2YDR295C IRC18P47056 224 aa3.1□□□□□ -1.91
HDA2YDR295C YJR012CP47087 207 aa3.1□□□□□ -1.91
HDA2YDR295C USE1P53146 245 aa3.1□□□□□ -1.91
HDA2YDR295C MMS2P53152 137 aa3.1□□□□□ -1.91
HDA2YDR295C CTR3Q06686 241 aa3.1□□□□□ -1.91
HDA2YDR295C FCY22Q12119 530 aa3.1□□□□□ -1.91
HDA2YDR295C SME1Q12330 94 aaPredicted RBP3.1□□□□□ -1.91
HDA2YDR295C RPS28AQ3E7X9 67 aaPredicted RBP3.1□□□□□ -1.91
HDA2YDR295C MEX67Q99257 599 aaKnown RBP3.1□□□□□ -1.91
HDA2YDR295C IZH4Q99393 312 aa3.1□□□□□ -1.91
HDA2YDR295C SAL1D6W196 494 aa3.09□□□□□ -1.91
HDA2YDR295C PET54P10834 293 aa3.09□□□□□ -1.91
HDA2YDR295C SLY1P22213 666 aa3.09□□□□□ -1.91
HDA2YDR295C MUD1P32605 298 aaKnown RBP3.09□□□□□ -1.91
HDA2YDR295C YBR056WP38081 501 aa3.09□□□□□ -1.91
HDA2YDR295C GRE3P38715 327 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
HDA2YDR295C LYS1P38998 373 aaRIP-Chip data3.09□□□□□ -1.91not detected
HDA2YDR295C BDH1P39714 382 aa3.09□□□□□ -1.91
HDA2YDR295C GUF1P46943 645 aa3.09□□□□□ -1.91
HDA2YDR295C NBP35P52920 328 aa3.09□□□□□ -1.91
HDA2YDR295C CDH1P53197 566 aa3.09□□□□□ -1.91
HDA2YDR295C PEX31P53203 462 aa3.09□□□□□ -1.91
HDA2YDR295C GTR2P53290 341 aa3.09□□□□□ -1.91
HDA2YDR295C YNL040WP53960 456 aaPredicted RBP3.09□□□□□ -1.91
HDA2YDR295C RFU1Q08003 200 aa3.09□□□□□ -1.91
HDA2YDR295C SGT1Q08446 395 aa3.09□□□□□ -1.91
HDA2YDR295C TAF10Q12030 206 aa3.09□□□□□ -1.91
HDA2YDR295C USB1Q12208 290 aaKnown RBP3.09□□□□□ -1.91
HDA2YDR295C YDL009CQ12210 107 aa3.09□□□□□ -1.91
HDA2YDR295C RPL20AP0CX23 172 aaKnown RBP3.09□□□□□ -1.92
HDA2YDR295C RPL20BP0CX24 172 aaPredicted RBP3.09□□□□□ -1.92
HDA2YDR295C PHO80P20052 293 aa3.09□□□□□ -1.92
HDA2YDR295C TCA17P32613 152 aa3.09□□□□□ -1.92
HDA2YDR295C CAT2P32796 670 aaKnown RBP3.09□□□□□ -1.92
HDA2YDR295C CPR5P35176 225 aa3.09□□□□□ -1.92
HDA2YDR295C RIM2P38127 377 aa3.09□□□□□ -1.92
HDA2YDR295C SHE3P38272 425 aaKnown RBP3.09□□□□□ -1.92
HDA2YDR295C YFH7P43591 353 aa3.09□□□□□ -1.92
HDA2YDR295C OST3P48439 350 aa3.09□□□□□ -1.92
HDA2YDR295C YIP1P53039 248 aa3.09□□□□□ -1.92
HDA2YDR295C GPI1P53306 609 aa3.09□□□□□ -1.92
HDA2YDR295C ASI3P53983 676 aa3.09□□□□□ -1.92
HDA2YDR295C YLR152CP54072 576 aa3.09□□□□□ -1.92
HDA2YDR295C ABF2Q02486 183 aa3.09□□□□□ -1.92
HDA2YDR295C ARO80Q04052 950 aa3.09□□□□□ -1.92
HDA2YDR295C YML096WQ04489 525 aa3.09□□□□□ -1.92
HDA2YDR295C YMR315WQ04869 349 aaKnown RBP3.09□□□□□ -1.92
HDA2YDR295C SFH1Q06168 426 aa3.09□□□□□ -1.92
HDA2YDR295C THI20Q08224 551 aa3.09□□□□□ -1.92
HDA2YDR295C ICT1Q12385 394 aa3.09□□□□□ -1.92
HDA2YDR295C SPT3P06844 337 aa3.08□□□□□ -1.92
HDA2YDR295C BCY1P07278 416 aaKnown RBP3.08□□□□□ -1.92
HDA2YDR295C SSC1P0CS90 654 aaKnown RBP3.08□□□□□ -1.92
HDA2YDR295C TFS1P14306 219 aa3.08□□□□□ -1.92
HDA2YDR295C AMD1P15274 810 aaKnown RBP3.08□□□□□ -1.92
HDA2YDR295C EXO70P19658 623 aa3.08□□□□□ -1.92
HDA2YDR295C LSB5P25369 354 aa3.08□□□□□ -1.92
HDA2YDR295C JEN1P36035 616 aa3.08□□□□□ -1.92
HDA2YDR295C YKR041WP36134 250 aa3.08□□□□□ -1.92
HDA2YDR295C GPX2P38143 162 aa3.08□□□□□ -1.92
HDA2YDR295C PCI8P40512 444 aa3.08□□□□□ -1.92
HDA2YDR295C PMT4P46971 762 aa3.08□□□□□ -1.92
HDA2YDR295C FRE4P53746 719 aa3.08□□□□□ -1.92
HDA2YDR295C CWC25P53854 179 aaKnown RBP3.08□□□□□ -1.92
HDA2YDR295C SPR6Q01684 191 aa3.08□□□□□ -1.92
HDA2YDR295C RMI1Q02685 241 aa3.08□□□□□ -1.92
HDA2YDR295C SNX41Q04053 625 aa3.08□□□□□ -1.92
HDA2YDR295C GRX8Q05926 109 aa3.08□□□□□ -1.92
HDA2YDR295C NOC4Q06512 552 aaPredicted RBP3.08□□□□□ -1.92
HDA2YDR295C YLR012CQ07927 99 aa3.08□□□□□ -1.92
HDA2YDR295C RRP42Q12277 265 aaPredicted RBP3.08□□□□□ -1.92
HDA2YDR295C NCA2Q12374 616 aa3.08□□□□□ -1.92
HDA2YDR295C CUP2P15315 225 aa3.07□□□□□ -1.92
HDA2YDR295C GRX2P17695 143 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 102.8 ms