RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C YAP1P19880 650 aaKnown RBP1.55□□□□□ -2.16
MSH6YDR097C AEP1P32493 518 aa1.55□□□□□ -2.16
MSH6YDR097C NDC1P32500 655 aa1.55□□□□□ -2.16
MSH6YDR097C TRS65P32893 560 aa1.55□□□□□ -2.16
MSH6YDR097C TIR2P33890 251 aa1.55□□□□□ -2.16
MSH6YDR097C HIS2P38635 335 aa1.55□□□□□ -2.16
MSH6YDR097C MRX5P47007 382 aa1.55□□□□□ -2.16
MSH6YDR097C USE1P53146 245 aa1.55□□□□□ -2.16
MSH6YDR097C YPL080CQ02826 108 aa1.55□□□□□ -2.16
MSH6YDR097C SDC1Q03323 175 aa1.55□□□□□ -2.16
MSH6YDR097C YLR173WQ06247 608 aa1.55□□□□□ -2.16
MSH6YDR097C SME1Q12330 94 aaPredicted RBP1.55□□□□□ -2.16
MSH6YDR097C NAM2P11325 894 aa1.54□□□□□ -2.16
MSH6YDR097C DPB2P24482 689 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C YCR016WP25617 290 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C RPC19P28000 142 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C SUA5P32579 426 aa1.54□□□□□ -2.16
MSH6YDR097C CUE2P36075 443 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C SOP4P39543 234 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C VAB2P40003 282 aa1.54□□□□□ -2.16
MSH6YDR097C RRG9P40156 214 aa1.54□□□□□ -2.16
MSH6YDR097C COX16P47081 118 aa1.54□□□□□ -2.16
MSH6YDR097C PGU1P47180 361 aa1.54□□□□□ -2.16
MSH6YDR097C CAF40P53829 373 aa1.54□□□□□ -2.16
MSH6YDR097C TDA7P53882 636 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C YPL077CQ02831 240 aa1.54□□□□□ -2.16
MSH6YDR097C YMR010WQ03687 405 aa1.54□□□□□ -2.16
MSH6YDR097C RVB1Q03940 463 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C PLP1Q04004 230 aa1.54□□□□□ -2.16
MSH6YDR097C YHC1Q05900 231 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C LOT6Q07923 191 aa1.54□□□□□ -2.16
MSH6YDR097C APC9Q12107 265 aa1.54□□□□□ -2.16
MSH6YDR097C GET4Q12125 312 aa1.54□□□□□ -2.16
MSH6YDR097C ADH2P00331 348 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C RPL31AP0C2H8 113 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C ARO4P32449 370 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C IMP3P32899 183 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C UBC6P33296 250 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C SPO23P33757 523 aa1.54□□□□□ -2.16
MSH6YDR097C DBP7P36120 742 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C PDS1P40316 373 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C FMC1P40491 155 aa1.54□□□□□ -2.16
MSH6YDR097C WWM1P43582 211 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C COS6P53344 381 aa1.54□□□□□ -2.16
MSH6YDR097C CWC21Q03375 135 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C DNL4Q08387 944 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C YRA1Q12159 226 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C YDR018CQ12185 396 aa1.54□□□□□ -2.16
MSH6YDR097C RIO1Q12196 484 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C SIA1Q12212 622 aa1.54□□□□□ -2.16
MSH6YDR097C YOS9Q99220 542 aa1.54□□□□□ -2.16
MSH6YDR097C TDH3P00359 332 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
MSH6YDR097C ATP1P07251 545 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C ARO2P28777 376 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C NUP2P32499 720 aa1.54□□□□□ -2.16
MSH6YDR097C ECT1P33412 323 aa1.54□□□□□ -2.16
MSH6YDR097C TIP20P33891 701 aa1.54□□□□□ -2.16
MSH6YDR097C PMU1P36069 295 aa1.54□□□□□ -2.16
MSH6YDR097C RPC37P36121 282 aa1.54□□□□□ -2.16
MSH6YDR097C PDX3P38075 228 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C MTC4P38335 694 aaKnown RBP1.54□□□□□ -2.16
MSH6YDR097C GDS1P41913 522 aa1.54□□□□□ -2.16
MSH6YDR097C YGR210CP42942 411 aa1.54□□□□□ -2.16
MSH6YDR097C HIT1P46973 164 aa1.54□□□□□ -2.16
MSH6YDR097C SKI8Q02793 397 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C YLR446WQ06204 433 aa1.54□□□□□ -2.16
MSH6YDR097C GGA1Q06336 557 aa1.54□□□□□ -2.16
MSH6YDR097C MUM3Q08750 479 aa1.54□□□□□ -2.16
MSH6YDR097C MSH5Q12175 901 aa1.54□□□□□ -2.16
MSH6YDR097C FRE8Q12209 686 aa1.54□□□□□ -2.16
MSH6YDR097C YOR029WQ12243 111 aa1.54□□□□□ -2.16
MSH6YDR097C TFC7Q12415 435 aa1.54□□□□□ -2.16
MSH6YDR097C PRP46Q12417 451 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C FOL3Q12676 427 aaPredicted RBP1.54□□□□□ -2.16
MSH6YDR097C SEY1Q99287 776 aa1.54□□□□□ -2.16
MSH6YDR097C MRP1P10662 321 aaKnown RBP1.53□□□□□ -2.16
MSH6YDR097C RSR1P13856 272 aa1.53□□□□□ -2.16
MSH6YDR097C MAK31P23059 88 aa1.53□□□□□ -2.16
MSH6YDR097C PTP1P25044 335 aa1.53□□□□□ -2.16
MSH6YDR097C UTP11P34247 250 aaPredicted RBP1.53□□□□□ -2.16
MSH6YDR097C MBA1P38300 278 aa1.53□□□□□ -2.16
MSH6YDR097C DED81P38707 554 aaKnown RBP1.53□□□□□ -2.16
MSH6YDR097C GEP4P38812 185 aa1.53□□□□□ -2.16
MSH6YDR097C YER184CP39961 794 aa1.53□□□□□ -2.16
MSH6YDR097C YIA6P40556 373 aa1.53□□□□□ -2.16
MSH6YDR097C YJR030CP47101 745 aa1.53□□□□□ -2.16
MSH6YDR097C SDS23P53172 527 aa1.53□□□□□ -2.16
MSH6YDR097C TRM112P53738 135 aaPredicted RBP1.53□□□□□ -2.16
MSH6YDR097C SWS2P53937 143 aa1.53□□□□□ -2.16
MSH6YDR097C PET117Q02771 107 aa1.53□□□□□ -2.16
MSH6YDR097C YDR209CQ03480 137 aa1.53□□□□□ -2.16
MSH6YDR097C MYO5Q04439 1219 aaKnown RBP1.53□□□□□ -2.16
MSH6YDR097C COA4Q05809 96 aa1.53□□□□□ -2.16
MSH6YDR097C SNA4Q07549 140 aa1.53□□□□□ -2.16
MSH6YDR097C RIF1P29539 1916 aa1.53□□□□□ -2.16
MSH6YDR097C YLR462WO13556 202 aa1.53□□□□□ -2.16
MSH6YDR097C RVS161P25343 265 aaKnown RBP1.53□□□□□ -2.16
MSH6YDR097C BUD23P25627 275 aaPredicted RBP1.53□□□□□ -2.16
MSH6YDR097C HOM6P31116 359 aaKnown RBP1.53□□□□□ -2.16
MSH6YDR097C NTG1P31378 399 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms