RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W YML096WQ04489 525 aa6.4□□□□□ -1.38
NUP84YDL116W RSF1Q05043 376 aa6.4□□□□□ -1.38
NUP84YDL116W YDL177CQ12257 170 aa6.4□□□□□ -1.38
NUP84YDL116W YRM1Q12340 786 aa6.4□□□□□ -1.38
NUP84YDL116W Q0142Q9ZZW4 58 aa6.4□□□□□ -1.38
NUP84YDL116W PRE2P30656 287 aaKnown RBP6.4□□□□□ -1.39
NUP84YDL116W SRB6P32570 121 aa6.4□□□□□ -1.39
NUP84YDL116W EMP24P32803 203 aaKnown RBP6.4□□□□□ -1.39
NUP84YDL116W MAL32P38158 584 aa6.4□□□□□ -1.39
NUP84YDL116W YJL068CP40363 299 aa6.4□□□□□ -1.39
NUP84YDL116W DUG1P43616 481 aaKnown RBP6.4□□□□□ -1.39
NUP84YDL116W NIT2P47016 307 aa6.4□□□□□ -1.39
NUP84YDL116W MAL12P53341 584 aa6.4□□□□□ -1.39
NUP84YDL116W YNR062CP53748 327 aa6.4□□□□□ -1.39
NUP84YDL116W ROY1Q04847 553 aa6.4□□□□□ -1.39
NUP84YDL116W YPR091CQ06833 770 aa6.4□□□□□ -1.39
NUP84YDL116W VMA9Q3E7B6 73 aa6.4□□□□□ -1.39
NUP84YDL116W REP2P03872 296 aa6.39□□□□□ -1.39
NUP84YDL116W PAU2P32612 120 aa6.39□□□□□ -1.39
NUP84YDL116W SPT23P35210 1082 aa6.39□□□□□ -1.39
NUP84YDL116W TAT1P38085 619 aa6.39□□□□□ -1.39
NUP84YDL116W DED81P38707 554 aaKnown RBP6.39□□□□□ -1.39
NUP84YDL116W YIL166CP40445 542 aa6.39□□□□□ -1.39
NUP84YDL116W MAD2P40958 196 aa6.39□□□□□ -1.39
NUP84YDL116W OTU1P43558 301 aa6.39□□□□□ -1.39
NUP84YDL116W ALK1P43633 760 aaKnown RBP6.39□□□□□ -1.39
NUP84YDL116W UBP8P50102 471 aa6.39□□□□□ -1.39
NUP84YDL116W PHO23P50947 330 aa6.39□□□□□ -1.39
NUP84YDL116W YGL117WP53133 265 aa6.39□□□□□ -1.39
NUP84YDL116W FHN1P53279 174 aa6.39□□□□□ -1.39
NUP84YDL116W PDR16P53860 351 aaKnown RBP6.39□□□□□ -1.39
NUP84YDL116W ODC1Q03028 310 aa6.39□□□□□ -1.39
NUP84YDL116W DCR2Q05924 578 aa6.39□□□□□ -1.39
NUP84YDL116W ANT1Q06497 328 aa6.39□□□□□ -1.39
NUP84YDL116W PUS9Q12069 462 aa6.39□□□□□ -1.39
NUP84YDL116W DGK1Q12382 290 aa6.39□□□□□ -1.39
NUP84YDL116W PTR2P32901 601 aa6.38□□□□□ -1.39
NUP84YDL116W RTT105P40063 208 aa6.38□□□□□ -1.39
NUP84YDL116W FMP10P40098 244 aa6.38□□□□□ -1.39
NUP84YDL116W MNT3P40549 630 aa6.38□□□□□ -1.39
NUP84YDL116W GLR1P41921 483 aaKnown RBP6.38□□□□□ -1.39
NUP84YDL116W RPE1P46969 238 aa6.38□□□□□ -1.39
NUP84YDL116W SSN8P47821 323 aa6.38□□□□□ -1.39
NUP84YDL116W UBC9P50623 157 aaPredicted RBP6.38□□□□□ -1.39
NUP84YDL116W TMN2Q04562 672 aa6.38□□□□□ -1.39
NUP84YDL116W SUL2Q12325 893 aa6.38□□□□□ -1.39
NUP84YDL116W KIN3P22209 435 aa6.38□□□□□ -1.39
NUP84YDL116W MRS4P23500 304 aa6.38□□□□□ -1.39
NUP84YDL116W ITR1P30605 584 aa6.38□□□□□ -1.39
NUP84YDL116W KRE6P32486 720 aa6.38□□□□□ -1.39
NUP84YDL116W DOA4P32571 926 aa6.38□□□□□ -1.39
NUP84YDL116W BFR1P38934 470 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39 RIP-Chip
NUP84YDL116W PHO90P39535 881 aa6.38□□□□□ -1.39
NUP84YDL116W YMR310CQ04867 317 aaPredicted RBP6.38□□□□□ -1.39
NUP84YDL116W RRT7Q07829 113 aa6.38□□□□□ -1.39
NUP84YDL116W GRC3Q07845 632 aa6.38□□□□□ -1.39
NUP84YDL116W HRT1Q08273 121 aa6.38□□□□□ -1.39
NUP84YDL116W RTK1Q12100 620 aaPredicted RBP6.38□□□□□ -1.39
NUP84YDL116W YPR071WQ12346 211 aa6.38□□□□□ -1.39
NUP84YDL116W ODC2Q99297 307 aa6.38□□□□□ -1.39
NUP84YDL116W YFR010W-AP0C5N0 62 aa6.37□□□□□ -1.39
NUP84YDL116W ECT1P33412 323 aa6.37□□□□□ -1.39
NUP84YDL116W PAN3P36102 679 aaPredicted RBP6.37□□□□□ -1.39
NUP84YDL116W VPS52P39904 641 aa6.37□□□□□ -1.39
NUP84YDL116W GPP2P40106 250 aaKnown RBP6.37□□□□□ -1.39
NUP84YDL116W RFC2P40348 353 aa6.37□□□□□ -1.39
NUP84YDL116W HIS6P40545 261 aa6.37□□□□□ -1.39
NUP84YDL116W SFH5P47008 294 aa6.37□□□□□ -1.39
NUP84YDL116W YIP4P53093 235 aa6.37□□□□□ -1.39
NUP84YDL116W RSM27P53305 110 aa6.37□□□□□ -1.39
NUP84YDL116W HXT11P54862 567 aa6.37□□□□□ -1.39
NUP84YDL116W YPL014WQ02606 381 aa6.37□□□□□ -1.39
NUP84YDL116W REC102Q02721 264 aa6.37□□□□□ -1.39
NUP84YDL116W HEM25Q07534 307 aa6.37□□□□□ -1.39
NUP84YDL116W NPC2Q12408 173 aa6.37□□□□□ -1.39
NUP84YDL116W TDH2P00358 332 aaKnown RBP6.37□□□□□ -1.39
NUP84YDL116W CPR3P25719 182 aa6.37□□□□□ -1.39
NUP84YDL116W MCM10P32354 571 aa6.37□□□□□ -1.39
NUP84YDL116W DAL3P32459 195 aa6.37□□□□□ -1.39
NUP84YDL116W ERG1P32476 496 aaKnown RBP6.37□□□□□ -1.39
NUP84YDL116W TAX4P47030 604 aa6.37□□□□□ -1.39
NUP84YDL116W YJL016WP47072 561 aa6.37□□□□□ -1.39
NUP84YDL116W YMR279CQ03263 540 aa6.37□□□□□ -1.39
NUP84YDL116W BNA7Q04066 261 aa6.37□□□□□ -1.39
NUP84YDL116W MMT2Q08970 484 aa6.37□□□□□ -1.39
NUP84YDL116W FRE6Q12473 712 aa6.37□□□□□ -1.39
NUP84YDL116W GCD1P09032 578 aaPredicted RBP6.36□□□□□ -1.39
NUP84YDL116W COQ2P32378 372 aa6.36□□□□□ -1.39
NUP84YDL116W CCZ1P38273 704 aa6.36□□□□□ -1.39
NUP84YDL116W SAP30P38429 201 aa6.36□□□□□ -1.39
NUP84YDL116W SRB7P47822 140 aa6.36□□□□□ -1.39
NUP84YDL116W SOK2P53438 785 aaPredicted RBP6.36□□□□□ -1.39
NUP84YDL116W LAP3Q01532 483 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
NUP84YDL116W SEN15Q04675 128 aa6.36□□□□□ -1.39
NUP84YDL116W ATG38Q05789 226 aaKnown RBP6.36□□□□□ -1.39
NUP84YDL116W YOR289WQ12012 251 aaPredicted RBP6.36□□□□□ -1.39
NUP84YDL116W PSF1Q12488 208 aa6.36□□□□□ -1.39
NUP84YDL116W YPR145C-AQ2V2P0 78 aa6.36□□□□□ -1.39
NUP84YDL116W TPI1P00942 248 aaKnown RBP6.35□□□□□ -1.39
NUP84YDL116W STE7P06784 515 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 182.1 ms